RNA–Protein interactions for RNA: ENST00000480911.5

CACNA1C-225, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 5 BASIC

Gene CACNA1C, Length 6,811 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-225ENST00000480911 TIRAPP58753 221 aa7.57□□□□□ -1.2
CACNA1C-225ENST00000480911 TREML4Q6UXN2 200 aa7.57□□□□□ -1.2
CACNA1C-225ENST00000480911 PIP4P2Q8N4L2 257 aa7.57□□□□□ -1.2
CACNA1C-225ENST00000480911 TINCRA0A1B0GVN0 87 aa7.57□□□□□ -1.2
CACNA1C-225ENST00000480911 GATA2P23769 480 aaPredicted RBP7.57□□□□□ -1.2
CACNA1C-225ENST00000480911 IGFL3Q6UXB1 125 aa7.57□□□□□ -1.2
CACNA1C-225ENST00000480911 ARFGEF3Q5TH69 2177 aa7.57□□□□□ -1.2
CACNA1C-225ENST00000480911 SCO2A0A1W2PP80 73 aa7.57□□□□□ -1.2
CACNA1C-225ENST00000480911 TIMM21Q9BVV7 248 aa7.57□□□□□ -1.2
CACNA1C-225ENST00000480911 IGHV3-16A0A0C4DH30 117 aa7.56□□□□□ -1.2
CACNA1C-225ENST00000480911 C17orf98A8MV24 154 aa7.56□□□□□ -1.2
CACNA1C-225ENST00000480911 RPL15P61313 204 aaKnown RBP7.56□□□□□ -1.2
CACNA1C-225ENST00000480911 HGFACQ04756 655 aa7.56□□□□□ -1.2
CACNA1C-225ENST00000480911 SRRM4A7MD48 611 aaKnown RBP7.56□□□□□ -1.2
CACNA1C-225ENST00000480911 LINC00312Q9Y6C7 94 aa7.56□□□□□ -1.2
CACNA1C-225ENST00000480911 J3QLI3 93 aa7.56□□□□□ -1.2
CACNA1C-225ENST00000480911 ZNF492Q9P255 531 aa7.56□□□□□ -1.2
CACNA1C-225ENST00000480911 PKIGQ9Y2B9 76 aa7.56□□□□□ -1.2
CACNA1C-225ENST00000480911 CFHR2P36980 270 aa7.56□□□□□ -1.2
CACNA1C-225ENST00000480911 PAX9P55771 341 aa7.56□□□□□ -1.2
CACNA1C-225ENST00000480911 FANCD2OSQ96PS1 177 aa7.56□□□□□ -1.2
CACNA1C-225ENST00000480911 PRO3102Q9H379 93 aa7.56□□□□□ -1.2
CACNA1C-225ENST00000480911 C9JAW5 83 aa7.56□□□□□ -1.2
CACNA1C-225ENST00000480911 IGKV4-1P06312 121 aa7.56□□□□□ -1.2
CACNA1C-225ENST00000480911 PLA2G2AP14555 144 aa7.56□□□□□ -1.2
CACNA1C-225ENST00000480911 KRTAP27-1Q3LI81 207 aa7.56□□□□□ -1.2
CACNA1C-225ENST00000480911 LYPD1Q8N2G4 141 aa7.56□□□□□ -1.2
CACNA1C-225ENST00000480911 OCC1Q8TAD7 63 aa7.56□□□□□ -1.2
CACNA1C-225ENST00000480911 SRSF8Q9BRL6 282 aaKnown RBP7.56□□□□□ -1.2
CACNA1C-225ENST00000480911 ETDCA0A1B0GVM5 59 aa7.55□□□□□ -1.2
CACNA1C-225ENST00000480911 RS1O15537 224 aa7.55□□□□□ -1.2
CACNA1C-225ENST00000480911 ANGP03950 147 aaKnown RBP7.55□□□□□ -1.2
CACNA1C-225ENST00000480911 CRYGCP07315 174 aa7.55□□□□□ -1.2
CACNA1C-225ENST00000480911 ATP5G3P48201 142 aa7.55□□□□□ -1.2
CACNA1C-225ENST00000480911 EFNB3Q15768 340 aa7.55□□□□□ -1.2
CACNA1C-225ENST00000480911 GGNQ86UU5 652 aa7.55□□□□□ -1.2
CACNA1C-225ENST00000480911 WIPF2Q8TF74 440 aaPredicted RBP7.55□□□□□ -1.2
CACNA1C-225ENST00000480911 NAA38Q9BRA0 125 aaKnown RBP7.55□□□□□ -1.2
CACNA1C-225ENST00000480911 AKAP6Q13023 2319 aa7.55□□□□□ -1.2
CACNA1C-225ENST00000480911 TRBV25-1A0A075B6N4 114 aa7.55□□□□□ -1.2
CACNA1C-225ENST00000480911 SRRM5B3KS81 715 aa7.55□□□□□ -1.2
CACNA1C-225ENST00000480911 ANKRD29Q8N6D5 301 aa7.55□□□□□ -1.2
CACNA1C-225ENST00000480911 RNF183Q96D59 192 aa7.55□□□□□ -1.2
CACNA1C-225ENST00000480911 MLNRO43193 412 aa7.55□□□□□ -1.2
CACNA1C-225ENST00000480911 PROP1O75360 226 aa7.55□□□□□ -1.2
CACNA1C-225ENST00000480911 UBE2V1Q13404 147 aa7.55□□□□□ -1.2
CACNA1C-225ENST00000480911 IGF2-ASQ6U949 168 aa7.55□□□□□ -1.2
CACNA1C-225ENST00000480911 C15orf53Q8NAA6 179 aa7.55□□□□□ -1.2
CACNA1C-225ENST00000480911 SPTSSBQ8NFR3 76 aa7.55□□□□□ -1.2
CACNA1C-225ENST00000480911 IFI27L1Q96BM0 104 aa7.55□□□□□ -1.2
CACNA1C-225ENST00000480911 GTF3C1Q12789 2109 aa7.55□□□□□ -1.2
CACNA1C-225ENST00000480911 CABIN1Q9Y6J0 2220 aa7.55□□□□□ -1.2
CACNA1C-225ENST00000480911 MSMBP08118 114 aa7.55□□□□□ -1.2
CACNA1C-225ENST00000480911 TFF3Q07654 80 aa7.55□□□□□ -1.2
CACNA1C-225ENST00000480911 MP68P56378 58 aa7.55□□□□□ -1.2
CACNA1C-225ENST00000480911 PRR4Q16378 134 aa7.55□□□□□ -1.2
CACNA1C-225ENST00000480911 Q6P435 159 aa7.55□□□□□ -1.2
CACNA1C-225ENST00000480911 KLRD1Q13241 179 aa7.54□□□□□ -1.2
CACNA1C-225ENST00000480911 KLF17Q5JT82 389 aaPredicted RBP7.54□□□□□ -1.2
CACNA1C-225ENST00000480911 IGF2BP2-AS1Q96M15 143 aa7.54□□□□□ -1.2
CACNA1C-225ENST00000480911 IGLV2-23P01705 113 aa7.54□□□□□ -1.2
CACNA1C-225ENST00000480911 ACYP1P07311 99 aa7.54□□□□□ -1.2
CACNA1C-225ENST00000480911 NDPQ00604 133 aa7.54□□□□□ -1.2
CACNA1C-225ENST00000480911 PVRIGQ6DKI7 326 aa7.54□□□□□ -1.2
CACNA1C-225ENST00000480911 LCN12Q6JVE5 192 aa7.54□□□□□ -1.2
CACNA1C-225ENST00000480911 C11orf1Q9H5F2 150 aa7.54□□□□□ -1.2
CACNA1C-225ENST00000480911 SPATA25Q9BR10 227 aa7.54□□□□□ -1.2
CACNA1C-225ENST00000480911 SLC25A39Q9BZJ4 359 aaPredicted RBP7.54□□□□□ -1.2
CACNA1C-225ENST00000480911 ZNF106Q9H2Y7 1883 aaKnown RBP7.54□□□□□ -1.2
CACNA1C-225ENST00000480911 NDUFC2O95298 119 aa7.54□□□□□ -1.2
CACNA1C-225ENST00000480911 FAM216BQ8N7L0 139 aa7.54□□□□□ -1.2
CACNA1C-225ENST00000480911 RNF125Q96EQ8 232 aa7.54□□□□□ -1.2
CACNA1C-225ENST00000480911 XCL2Q9UBD3 114 aa7.54□□□□□ -1.2
CACNA1C-225ENST00000480911 IGKV2-40A0A087WW87 121 aaPredicted RBP7.54□□□□□ -1.2
CACNA1C-225ENST00000480911 A0A087WWL8 130 aa7.54□□□□□ -1.2
CACNA1C-225ENST00000480911 IGKV2D-40P01614 121 aaPredicted RBP7.54□□□□□ -1.2
CACNA1C-225ENST00000480911 B3GALT5-AS1P59052 145 aa7.54□□□□□ -1.2
CACNA1C-225ENST00000480911 HSD52Q0P140 79 aa7.54□□□□□ -1.2
CACNA1C-225ENST00000480911 MAJINQ3KP22 176 aa7.54□□□□□ -1.2
CACNA1C-225ENST00000480911 ATP6V0BQ99437 205 aa7.54□□□□□ -1.2
CACNA1C-225ENST00000480911 CSTL1Q9H114 145 aa7.54□□□□□ -1.2
CACNA1C-225ENST00000480911 ZNF329Q86UD4 541 aa7.53□□□□□ -1.2
CACNA1C-225ENST00000480911 F6UB75 175 aa7.53□□□□□ -1.2
CACNA1C-225ENST00000480911 LYNX1G3V0Z9 82 aa7.53□□□□□ -1.2
CACNA1C-225ENST00000480911 LYNX1P0DP58 116 aa7.53□□□□□ -1.2
CACNA1C-225ENST00000480911 MORN2Q502X0 79 aa7.53□□□□□ -1.2
CACNA1C-225ENST00000480911 BOD1L2Q8IYS8 172 aa7.53□□□□□ -1.2
CACNA1C-225ENST00000480911 F2Z2F3 143 aa7.53□□□□□ -1.2
CACNA1C-225ENST00000480911 H0Y9J4 135 aa7.53□□□□□ -1.2
CACNA1C-225ENST00000480911 SCN2AQ99250 2005 aa7.53□□□□□ -1.2
CACNA1C-225ENST00000480911 GAGE12BA1L429 117 aa7.53□□□□□ -1.2
CACNA1C-225ENST00000480911 GAGE7O76087 117 aa7.53□□□□□ -1.2
CACNA1C-225ENST00000480911 GAGE12FP0CL80 117 aa7.53□□□□□ -1.2
CACNA1C-225ENST00000480911 GAGE12GP0CL81 117 aa7.53□□□□□ -1.2
CACNA1C-225ENST00000480911 GAGE12IP0CL82 117 aa7.53□□□□□ -1.2
CACNA1C-225ENST00000480911 MIR17HGQ75NE6 70 aa7.53□□□□□ -1.2
CACNA1C-225ENST00000480911 SPINK8P0C7L1 97 aa7.53□□□□□ -1.2
CACNA1C-225ENST00000480911 VSIRQ9H7M9 311 aa7.53□□□□□ -1.2
CACNA1C-225ENST00000480911 FOXF2Q12947 444 aa7.52□□□□□ -1.2
CACNA1C-225ENST00000480911 ZDBF2Q9HCK1 2354 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms