RNA–Protein interactions for RNA: ENST00000480179.1

PKNOX1-206, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 2

Gene PKNOX1, Length 1,725 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-206ENST00000480179 NUDT11Q96G61 164 aa11.21□□□□□ -0.62
PKNOX1-206ENST00000480179 COL6A5A8TX70 2615 aa11.2□□□□□ -0.62
PKNOX1-206ENST00000480179 ATRQ13535 2644 aa11.2□□□□□ -0.62
PKNOX1-206ENST00000480179 SPINK4O60575 86 aa11.2□□□□□ -0.62
PKNOX1-206ENST00000480179 CSN1S1P47710 185 aa11.2□□□□□ -0.62
PKNOX1-206ENST00000480179 RAB9AP51151 201 aa11.2□□□□□ -0.62
PKNOX1-206ENST00000480179 MLST8Q9BVC4 326 aa11.2□□□□□ -0.62
PKNOX1-206ENST00000480179 HLA-DMBP28068 263 aa11.19□□□□□ -0.62
PKNOX1-206ENST00000480179 C10orf99Q6UWK7 81 aa11.19□□□□□ -0.62
PKNOX1-206ENST00000480179 SIGLECL1Q8N7X8 197 aa11.19□□□□□ -0.62
PKNOX1-206ENST00000480179 GRAMD2BQ96HH9 432 aa11.19□□□□□ -0.62
PKNOX1-206ENST00000480179 YAE1D1Q9NRH1 226 aa11.19□□□□□ -0.62
PKNOX1-206ENST00000480179 ZNF580Q9UK33 172 aa11.19□□□□□ -0.62
PKNOX1-206ENST00000480179 TRAPPC1Q9Y5R8 145 aa11.19□□□□□ -0.62
PKNOX1-206ENST00000480179 IGKV2-40A0A087WW87 121 aaPredicted RBP11.18□□□□□ -0.62
PKNOX1-206ENST00000480179 A0A087X0K7 114 aa11.18□□□□□ -0.62
PKNOX1-206ENST00000480179 A0A0G2JLM5 398 aa11.18□□□□□ -0.62
PKNOX1-206ENST00000480179 TRBV6-1A0A0K0K1D8 114 aa11.18□□□□□ -0.62
PKNOX1-206ENST00000480179 SMIM27A0A1W2PRY6 76 aa11.18□□□□□ -0.62
PKNOX1-206ENST00000480179 HAX1O00165 279 aa11.18□□□□□ -0.62
PKNOX1-206ENST00000480179 IGKV2D-40P01614 121 aaPredicted RBP11.18□□□□□ -0.62
PKNOX1-206ENST00000480179 CBLN1P23435 193 aa11.18□□□□□ -0.62
PKNOX1-206ENST00000480179 SLC35B1P78383 322 aa11.18□□□□□ -0.62
PKNOX1-206ENST00000480179 KRTAP1-1Q07627 177 aa11.18□□□□□ -0.62
PKNOX1-206ENST00000480179 PSG3Q16557 428 aa11.18□□□□□ -0.62
PKNOX1-206ENST00000480179 UNQ9165/PRO28630Q6UXU0 137 aa11.18□□□□□ -0.62
PKNOX1-206ENST00000480179 LINC00322Q6ZN03 302 aaPredicted RBP11.18□□□□□ -0.62
PKNOX1-206ENST00000480179 TMEM183AQ8IXX5 376 aa11.18□□□□□ -0.62
PKNOX1-206ENST00000480179 DUX5Q96PT3 197 aa11.18□□□□□ -0.62
PKNOX1-206ENST00000480179 PRSS22Q9GZN4 317 aa11.18□□□□□ -0.62
PKNOX1-206ENST00000480179 ZNF492Q9P255 531 aa11.18□□□□□ -0.62
PKNOX1-206ENST00000480179 PSG8Q9UQ74 426 aa11.18□□□□□ -0.62
PKNOX1-206ENST00000480179 SONP18583 2426 aaKnown RBP11.18□□□□□ -0.62
PKNOX1-206ENST00000480179 CD5LO43866 347 aa11.18□□□□□ -0.62
PKNOX1-206ENST00000480179 IGHG4P01861 327 aa11.18□□□□□ -0.62
PKNOX1-206ENST00000480179 FRMD6-AS1P0C7T7 363 aa11.18□□□□□ -0.62
PKNOX1-206ENST00000480179 C1orf194Q5T5A4 169 aa11.18□□□□□ -0.62
PKNOX1-206ENST00000480179 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.18□□□□□ -0.62
PKNOX1-206ENST00000480179 GBGT1Q8N5D6 347 aa11.18□□□□□ -0.62
PKNOX1-206ENST00000480179 ZNF702PQ9H963 129 aa11.18□□□□□ -0.62
PKNOX1-206ENST00000480179 MXRA5Q9NR99 2828 aa11.17□□□□□ -0.62
PKNOX1-206ENST00000480179 NDUFA4O00483 81 aa11.17□□□□□ -0.62
PKNOX1-206ENST00000480179 CHEK1O14757 476 aa11.17□□□□□ -0.62
PKNOX1-206ENST00000480179 ZNF253O75346 499 aa11.17□□□□□ -0.62
PKNOX1-206ENST00000480179 MRPL54Q6P161 138 aaKnown RBP11.17□□□□□ -0.62
PKNOX1-206ENST00000480179 ZC2HC1AQ96GY0 325 aa11.17□□□□□ -0.62
PKNOX1-206ENST00000480179 NPFFR1Q9GZQ6 430 aa11.17□□□□□ -0.62
PKNOX1-206ENST00000480179 RPP21Q9H633 154 aaKnown RBP11.17□□□□□ -0.62
PKNOX1-206ENST00000480179 ZNF331Q9NQX6 463 aaPredicted RBP11.17□□□□□ -0.62
PKNOX1-206ENST00000480179 U3KQE9 123 aa11.17□□□□□ -0.62
PKNOX1-206ENST00000480179 P01737 135 aa11.16□□□□□ -0.62
PKNOX1-206ENST00000480179 PSMB8P28062 276 aa11.16□□□□□ -0.62
PKNOX1-206ENST00000480179 RNF182Q8N6D2 247 aa11.16□□□□□ -0.62
PKNOX1-206ENST00000480179 DAZAP1Q96EP5 407 aaKnown RBP11.16□□□□□ -0.62
PKNOX1-206ENST00000480179 C19orf71A6NCJ1 209 aa11.15□□□□□ -0.62
PKNOX1-206ENST00000480179 ZNF705FA8MVS1 300 aaPredicted RBP11.15□□□□□ -0.62
PKNOX1-206ENST00000480179 HOXA5P20719 270 aa11.15□□□□□ -0.62
PKNOX1-206ENST00000480179 GFI1BQ5VTD9 330 aa11.15□□□□□ -0.62
PKNOX1-206ENST00000480179 TMEM158Q8WZ71 300 aa11.15□□□□□ -0.62
PKNOX1-206ENST00000480179 PRDM13Q9H4Q3 707 aa11.15□□□□□ -0.62
PKNOX1-206ENST00000480179 ZFP30Q9Y2G7 519 aa11.15□□□□□ -0.62
PKNOX1-206ENST00000480179 FBN1P35555 2871 aaKnown RBP11.15□□□□□ -0.62
PKNOX1-206ENST00000480179 SERTM2A0A1B0GWG4 89 aa11.15□□□□□ -0.63
PKNOX1-206ENST00000480179 IZUMO1RA6ND01 250 aa11.15□□□□□ -0.63
PKNOX1-206ENST00000480179 PDZD11Q5EBL8 140 aa11.15□□□□□ -0.63
PKNOX1-206ENST00000480179 C16orf54Q6UWD8 224 aa11.15□□□□□ -0.63
PKNOX1-206ENST00000480179 TSKUQ8WUA8 353 aa11.15□□□□□ -0.63
PKNOX1-206ENST00000480179 C8orf49Q96NF6 230 aa11.15□□□□□ -0.63
PKNOX1-206ENST00000480179 SLC50A1Q9BRV3 221 aa11.15□□□□□ -0.63
PKNOX1-206ENST00000480179 MRPL18Q9H0U6 180 aaKnown RBP11.15□□□□□ -0.63
PKNOX1-206ENST00000480179 XKRY2A2RUG3 117 aa11.14□□□□□ -0.63
PKNOX1-206ENST00000480179 SNURFLB1AK76 121 aa11.14□□□□□ -0.63
PKNOX1-206ENST00000480179 RPL19P84098 196 aaKnown RBP11.14□□□□□ -0.63
PKNOX1-206ENST00000480179 Q8TAT8 98 aa11.14□□□□□ -0.63
PKNOX1-206ENST00000480179 GLMPQ8WWB7 406 aa11.14□□□□□ -0.63
PKNOX1-206ENST00000480179 NEU1Q99519 415 aa11.14□□□□□ -0.63
PKNOX1-206ENST00000480179 PEF1Q9UBV8 284 aaKnown RBP11.14□□□□□ -0.63
PKNOX1-206ENST00000480179 STAB1Q9NY15 2570 aa11.14□□□□□ -0.63
PKNOX1-206ENST00000480179 RPLP1P05386 114 aaKnown RBP11.13□□□□□ -0.63
PKNOX1-206ENST00000480179 RAB4BP61018 213 aa11.13□□□□□ -0.63
PKNOX1-206ENST00000480179 FAM209BQ5JX69 171 aa11.13□□□□□ -0.63
PKNOX1-206ENST00000480179 LCN12Q6JVE5 192 aa11.13□□□□□ -0.63
PKNOX1-206ENST00000480179 C8orf86Q6ZUL3 223 aa11.13□□□□□ -0.63
PKNOX1-206ENST00000480179 TCF24Q7RTU0 167 aa11.13□□□□□ -0.63
PKNOX1-206ENST00000480179 NUP35Q8NFH5 326 aa11.13□□□□□ -0.63
PKNOX1-206ENST00000480179 VGLL1Q99990 258 aa11.13□□□□□ -0.63
PKNOX1-206ENST00000480179 NAT8BQ9UHF3 227 aa11.13□□□□□ -0.63
PKNOX1-206ENST00000480179 TRAV8-2A0A0B4J237 113 aa11.12□□□□□ -0.63
PKNOX1-206ENST00000480179 TMEM89A2RUT3 159 aa11.12□□□□□ -0.63
PKNOX1-206ENST00000480179 IFITM10A6NMD0 228 aa11.12□□□□□ -0.63
PKNOX1-206ENST00000480179 HIGD1CA8MV81 97 aa11.12□□□□□ -0.63
PKNOX1-206ENST00000480179 PRAC2D3DTV9 90 aa11.12□□□□□ -0.63
PKNOX1-206ENST00000480179 CDX1P47902 265 aaPredicted RBP11.12□□□□□ -0.63
PKNOX1-206ENST00000480179 HIST3H2BBQ8N257 126 aa11.12□□□□□ -0.63
PKNOX1-206ENST00000480179 TEX29Q8N6K0 151 aa11.12□□□□□ -0.63
PKNOX1-206ENST00000480179 OR2D3Q8NGH3 330 aa11.12□□□□□ -0.63
PKNOX1-206ENST00000480179 A8MWL6 223 aa11.12□□□□□ -0.63
PKNOX1-206ENST00000480179 TM4SF20Q53R12 229 aa11.12□□□□□ -0.63
PKNOX1-206ENST00000480179 CT83Q5H943 113 aa11.12□□□□□ -0.63
PKNOX1-206ENST00000480179 WDR73Q6P4I2 378 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms