RNA–Protein interactions for RNA: ENST00000479335.5

RAD51B-208, Transcript of RAD51 paralog B, humanhuman

TSL 1 (best)

Gene RAD51B, Length 1,615 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD51B-208ENST00000479335 FABP9Q0Z7S8 132 aa7.56□□□□□ -1.2
RAD51B-208ENST00000479335 SCGB2A2Q13296 93 aa7.56□□□□□ -1.2
RAD51B-208ENST00000479335 LCN12Q6JVE5 192 aa7.56□□□□□ -1.2
RAD51B-208ENST00000479335 WDR73Q6P4I2 378 aa7.56□□□□□ -1.2
RAD51B-208ENST00000479335 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.56□□□□□ -1.2
RAD51B-208ENST00000479335 PRNTQ86SH4 94 aa7.56□□□□□ -1.2
RAD51B-208ENST00000479335 SIGLECL1Q8N7X8 197 aa7.56□□□□□ -1.2
RAD51B-208ENST00000479335 TSKUQ8WUA8 353 aa7.56□□□□□ -1.2
RAD51B-208ENST00000479335 GLMPQ8WWB7 406 aa7.56□□□□□ -1.2
RAD51B-208ENST00000479335 SGK494Q96LW2 274 aa7.56□□□□□ -1.2
RAD51B-208ENST00000479335 GNB1LQ9BYB4 327 aa7.56□□□□□ -1.2
RAD51B-208ENST00000479335 GFRA4Q9GZZ7 299 aa7.56□□□□□ -1.2
RAD51B-208ENST00000479335 NAT8BQ9UHF3 227 aa7.56□□□□□ -1.2
RAD51B-208ENST00000479335 TRAPPC1Q9Y5R8 145 aa7.56□□□□□ -1.2
RAD51B-208ENST00000479335 PDZD2O15018 2839 aa7.55□□□□□ -1.2
RAD51B-208ENST00000479335 IGHV3OR16-8A0A075B7F1 116 aa7.55□□□□□ -1.2
RAD51B-208ENST00000479335 TRAV8-1A0A0A6YYK1 113 aa7.55□□□□□ -1.2
RAD51B-208ENST00000479335 CHEK1O14757 476 aa7.55□□□□□ -1.2
RAD51B-208ENST00000479335 SMAD7O15105 426 aaKnown RBP7.55□□□□□ -1.2
RAD51B-208ENST00000479335 TRBV12-3P01733 135 aa7.55□□□□□ -1.2
RAD51B-208ENST00000479335 P01737 135 aa7.55□□□□□ -1.2
RAD51B-208ENST00000479335 APOHP02749 345 aaPredicted RBP7.55□□□□□ -1.2
RAD51B-208ENST00000479335 NDUFA6P56556 154 aa7.55□□□□□ -1.2
RAD51B-208ENST00000479335 PRR27Q6MZM9 219 aa7.55□□□□□ -1.2
RAD51B-208ENST00000479335 UBE2E2Q96LR5 201 aa7.55□□□□□ -1.2
RAD51B-208ENST00000479335 RPP21Q9H633 154 aaKnown RBP7.55□□□□□ -1.2
RAD51B-208ENST00000479335 SVEP1Q4LDE5 3571 aa7.55□□□□□ -1.2
RAD51B-208ENST00000479335 BMI1P35226 326 aa7.54□□□□□ -1.2
RAD51B-208ENST00000479335 CDX1P47902 265 aaPredicted RBP7.54□□□□□ -1.2
RAD51B-208ENST00000479335 KRTAP1-1Q07627 177 aa7.54□□□□□ -1.2
RAD51B-208ENST00000479335 TMEM95Q3KNT9 176 aa7.54□□□□□ -1.2
RAD51B-208ENST00000479335 COA6Q5JTJ3 125 aaKnown RBP7.54□□□□□ -1.2
RAD51B-208ENST00000479335 UNQ9165/PRO28630Q6UXU0 137 aa7.54□□□□□ -1.2
RAD51B-208ENST00000479335 ATP5L2Q7Z4Y8 100 aa7.54□□□□□ -1.2
RAD51B-208ENST00000479335 GBGT1Q8N5D6 347 aa7.54□□□□□ -1.2
RAD51B-208ENST00000479335 WIPF2Q8TF74 440 aaPredicted RBP7.54□□□□□ -1.2
RAD51B-208ENST00000479335 TMEM160Q9NX00 188 aa7.54□□□□□ -1.2
RAD51B-208ENST00000479335 PPP1R14DQ9NXH3 145 aa7.54□□□□□ -1.2
RAD51B-208ENST00000479335 ITPR3Q14573 2671 aa7.54□□□□□ -1.2
RAD51B-208ENST00000479335 IGHV7-4-1A0A0J9YVY3 117 aa7.53□□□□□ -1.2
RAD51B-208ENST00000479335 ZNF207O43670 478 aaKnown RBP7.53□□□□□ -1.2
RAD51B-208ENST00000479335 S100A8P05109 93 aa7.53□□□□□ -1.2
RAD51B-208ENST00000479335 CT45A10P0DMU9 189 aa7.53□□□□□ -1.2
RAD51B-208ENST00000479335 FOXA3P55318 350 aaPredicted RBP7.53□□□□□ -1.2
RAD51B-208ENST00000479335 SAMD13Q5VXD3 122 aa7.53□□□□□ -1.2
RAD51B-208ENST00000479335 LINC00322Q6ZN03 302 aaPredicted RBP7.53□□□□□ -1.2
RAD51B-208ENST00000479335 C8orf86Q6ZUL3 223 aa7.53□□□□□ -1.2
RAD51B-208ENST00000479335 DAZ1Q9NQZ3 744 aaKnown RBP7.53□□□□□ -1.2
RAD51B-208ENST00000479335 UFC1Q9Y3C8 167 aa7.53□□□□□ -1.2
RAD51B-208ENST00000479335 CSMD2Q7Z408 3487 aa7.53□□□□□ -1.2
RAD51B-208ENST00000479335 BAHCC1Q9P281 2608 aa7.53□□□□□ -1.2
RAD51B-208ENST00000479335 LGALS1P09382 135 aaKnown RBP7.52□□□□□ -1.2
RAD51B-208ENST00000479335 LCNL1Q6ZST4 164 aa7.52□□□□□ -1.2
RAD51B-208ENST00000479335 NUP35Q8NFH5 326 aa7.52□□□□□ -1.2
RAD51B-208ENST00000479335 WFDC12Q8WWY7 111 aa7.52□□□□□ -1.2
RAD51B-208ENST00000479335 ZC2HC1AQ96GY0 325 aa7.52□□□□□ -1.2
RAD51B-208ENST00000479335 PRR25Q96S07 402 aa7.52□□□□□ -1.2
RAD51B-208ENST00000479335 SMPXQ9UHP9 88 aa7.52□□□□□ -1.2
RAD51B-208ENST00000479335 MXRA5Q9NR99 2828 aa7.52□□□□□ -1.21
RAD51B-208ENST00000479335 IGHV3OR16-13A0A075B7E8 117 aa7.52□□□□□ -1.21
RAD51B-208ENST00000479335 IGHV3-74A0A0B4J1X5 117 aa7.52□□□□□ -1.21
RAD51B-208ENST00000479335 TRAV8-2A0A0B4J237 113 aa7.52□□□□□ -1.21
RAD51B-208ENST00000479335 IGHV3-66A0A0C4DH42 116 aa7.52□□□□□ -1.21
RAD51B-208ENST00000479335 LGALS9O00182 355 aa7.52□□□□□ -1.21
RAD51B-208ENST00000479335 HLA-DQA1P01909 254 aa7.52□□□□□ -1.21
RAD51B-208ENST00000479335 RPLP1P05386 114 aaKnown RBP7.52□□□□□ -1.21
RAD51B-208ENST00000479335 SRSF2Q01130 221 aaKnown RBP7.52□□□□□ -1.21
RAD51B-208ENST00000479335 REC114Q7Z4M0 266 aa7.52□□□□□ -1.21
RAD51B-208ENST00000479335 NEU1Q99519 415 aa7.52□□□□□ -1.21
RAD51B-208ENST00000479335 NDFIP1Q9BT67 221 aa7.52□□□□□ -1.21
RAD51B-208ENST00000479335 YAE1D1Q9NRH1 226 aa7.52□□□□□ -1.21
RAD51B-208ENST00000479335 PGPEP1Q9NXJ5 209 aa7.52□□□□□ -1.21
RAD51B-208ENST00000479335 IGKV2-40A0A087WW87 121 aaPredicted RBP7.51□□□□□ -1.21
RAD51B-208ENST00000479335 IGHV3-49A0A0A0MS15 119 aa7.51□□□□□ -1.21
RAD51B-208ENST00000479335 HIGD1CA8MV81 97 aa7.51□□□□□ -1.21
RAD51B-208ENST00000479335 SNURFLB1AK76 121 aa7.51□□□□□ -1.21
RAD51B-208ENST00000479335 CA1P00915 261 aaPredicted RBP7.51□□□□□ -1.21
RAD51B-208ENST00000479335 IGKV2D-40P01614 121 aaPredicted RBP7.51□□□□□ -1.21
RAD51B-208ENST00000479335 AKR1D1P51857 326 aa7.51□□□□□ -1.21
RAD51B-208ENST00000479335 TCL1AP56279 114 aa7.51□□□□□ -1.21
RAD51B-208ENST00000479335 Q6AWC8 147 aa7.51□□□□□ -1.21
RAD51B-208ENST00000479335 TMEM136Q6ZRR5 245 aa7.51□□□□□ -1.21
RAD51B-208ENST00000479335 RBPMS2Q6ZRY4 209 aaKnown RBP7.51□□□□□ -1.21
RAD51B-208ENST00000479335 C9orf47Q6ZRZ4 202 aa7.51□□□□□ -1.21
RAD51B-208ENST00000479335 C16orf92Q96LL3 132 aa7.51□□□□□ -1.21
RAD51B-208ENST00000479335 RHPN1-AS1Q9BWJ2 59 aa7.51□□□□□ -1.21
RAD51B-208ENST00000479335 MRPL18Q9H0U6 180 aaKnown RBP7.51□□□□□ -1.21
RAD51B-208ENST00000479335 NRN1Q9NPD7 142 aa7.51□□□□□ -1.21
RAD51B-208ENST00000479335 LENEPQ9Y5L5 61 aa7.51□□□□□ -1.21
RAD51B-208ENST00000479335 CSMD1Q96PZ7 3565 aa7.51□□□□□ -1.21
RAD51B-208ENST00000479335 UNC79Q9P2D8 2635 aa7.51□□□□□ -1.21
RAD51B-208ENST00000479335 XKRY2A2RUG3 117 aa7.5□□□□□ -1.21
RAD51B-208ENST00000479335 ZNF705FA8MVS1 300 aaPredicted RBP7.5□□□□□ -1.21
RAD51B-208ENST00000479335 A8MWP6 167 aa7.5□□□□□ -1.21
RAD51B-208ENST00000479335 CBLN1P23435 193 aa7.5□□□□□ -1.21
RAD51B-208ENST00000479335 HLA-DMBP28068 263 aa7.5□□□□□ -1.21
RAD51B-208ENST00000479335 CRIP1P50238 77 aa7.5□□□□□ -1.21
RAD51B-208ENST00000479335 RPS20P60866 119 aaKnown RBP7.5□□□□□ -1.21
RAD51B-208ENST00000479335 SMUG1Q53HV7 270 aa7.5□□□□□ -1.21
RAD51B-208ENST00000479335 TM4SF20Q53R12 229 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms