RNA–Protein interactions for RNA: ENST00000478525.1

HPS3-205, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 3

Gene HPS3, Length 601 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-205ENST00000478525 COX5BP10606 129 aa-0.31□□□□□ -2.46
HPS3-205ENST00000478525 ERP29P30040 261 aaKnown RBP-0.31□□□□□ -2.46
HPS3-205ENST00000478525 SRIP30626 198 aa-0.31□□□□□ -2.46
HPS3-205ENST00000478525 PIGPP57054 158 aa-0.31□□□□□ -2.46
HPS3-205ENST00000478525 RPS20P60866 119 aaKnown RBP-0.31□□□□□ -2.46
HPS3-205ENST00000478525 SNRPD3P62318 126 aaKnown RBP-0.31□□□□□ -2.46
HPS3-205ENST00000478525 KLKP1Q107X0 134 aa-0.31□□□□□ -2.46
HPS3-205ENST00000478525 TMED1Q13445 227 aa-0.31□□□□□ -2.46
HPS3-205ENST00000478525 EDDM3AQ14507 147 aa-0.31□□□□□ -2.46
HPS3-205ENST00000478525 IMPG1Q17R60 797 aa-0.31□□□□□ -2.46
HPS3-205ENST00000478525 C1orf134Q5TEV5 83 aa-0.31□□□□□ -2.46
HPS3-205ENST00000478525 PATE2Q6UY27 113 aa-0.31□□□□□ -2.46
HPS3-205ENST00000478525 C3orf62Q6ZUJ4 267 aa-0.31□□□□□ -2.46
HPS3-205ENST00000478525 DEFB132Q7Z7B7 95 aa-0.31□□□□□ -2.46
HPS3-205ENST00000478525 OR52R1Q8NGF1 315 aa-0.31□□□□□ -2.46
HPS3-205ENST00000478525 NAT14Q8WUY8 206 aa-0.31□□□□□ -2.46
HPS3-205ENST00000478525 PTH2Q96A98 100 aa-0.31□□□□□ -2.46
HPS3-205ENST00000478525 ISOC1Q96CN7 298 aa-0.31□□□□□ -2.46
HPS3-205ENST00000478525 ARL5BQ96KC2 179 aa-0.31□□□□□ -2.46
HPS3-205ENST00000478525 DSCR8Q96T75 97 aa-0.31□□□□□ -2.46
HPS3-205ENST00000478525 EFCAB11Q9BUY7 163 aa-0.31□□□□□ -2.46
HPS3-205ENST00000478525 GGACTQ9BVM4 153 aa-0.31□□□□□ -2.46
HPS3-205ENST00000478525 CACYBPQ9HB71 228 aaKnown RBP-0.31□□□□□ -2.46
HPS3-205ENST00000478525 TMEM14BQ9NUH8 114 aa-0.31□□□□□ -2.46
HPS3-205ENST00000478525 CMTM6Q9NX76 183 aa-0.31□□□□□ -2.46
HPS3-205ENST00000478525 COA4Q9NYJ1 87 aa-0.31□□□□□ -2.46
HPS3-205ENST00000478525 SNAPC4Q5SXM2 1469 aa-0.31□□□□□ -2.46
HPS3-205ENST00000478525 ABCA1O95477 2261 aa-0.31□□□□□ -2.46
HPS3-205ENST00000478525 HSPG2P98160 4391 aa-0.31□□□□□ -2.46
HPS3-205ENST00000478525 MYH2Q9UKX2 1941 aa-0.32□□□□□ -2.46
HPS3-205ENST00000478525 AKAP6Q13023 2319 aa-0.32□□□□□ -2.46
HPS3-205ENST00000478525 A0A096LNT2 108 aa-0.32□□□□□ -2.46
HPS3-205ENST00000478525 CLDN24A6NM45 220 aa-0.32□□□□□ -2.46
HPS3-205ENST00000478525 BBIP1A8MTZ0 92 aa-0.32□□□□□ -2.46
HPS3-205ENST00000478525 TAX1BP3O14907 124 aa-0.32□□□□□ -2.46
HPS3-205ENST00000478525 TGOLN2O43493 480 aa-0.32□□□□□ -2.46
HPS3-205ENST00000478525 PIAS1O75925 651 aa-0.32□□□□□ -2.46
HPS3-205ENST00000478525 IFNA14P01570 189 aa-0.32□□□□□ -2.46
HPS3-205ENST00000478525 APOC1P02654 83 aa-0.32□□□□□ -2.46
HPS3-205ENST00000478525 IFNA16P05015 189 aa-0.32□□□□□ -2.46
HPS3-205ENST00000478525 DYNLT3P51808 116 aa-0.32□□□□□ -2.46
HPS3-205ENST00000478525 CEBPGP53567 150 aa-0.32□□□□□ -2.46
HPS3-205ENST00000478525 DNAJB13P59910 316 aa-0.32□□□□□ -2.46
HPS3-205ENST00000478525 MRPS36P82909 103 aaKnown RBP-0.32□□□□□ -2.46
HPS3-205ENST00000478525 AESQ08117 197 aa-0.32□□□□□ -2.46
HPS3-205ENST00000478525 MIR22HGQ0VDD5 57 aa-0.32□□□□□ -2.46
HPS3-205ENST00000478525 KLRD1Q13241 179 aa-0.32□□□□□ -2.46
HPS3-205ENST00000478525 DIAPH2-AS1Q14236 149 aa-0.32□□□□□ -2.46
HPS3-205ENST00000478525 SNCBQ16143 134 aa-0.32□□□□□ -2.46
HPS3-205ENST00000478525 HACD4Q5VWC8 232 aa-0.32□□□□□ -2.46
HPS3-205ENST00000478525 FOXI2Q6ZQN5 318 aa-0.32□□□□□ -2.46
HPS3-205ENST00000478525 TMEM86BQ8N661 226 aa-0.32□□□□□ -2.46
HPS3-205ENST00000478525 CLDN22Q8N7P3 220 aa-0.32□□□□□ -2.46
HPS3-205ENST00000478525 PPTC7Q8NI37 304 aa-0.32□□□□□ -2.46
HPS3-205ENST00000478525 NMNAT1Q9HAN9 279 aaPredicted RBP-0.32□□□□□ -2.46
HPS3-205ENST00000478525 C19orf12Q9NSK7 152 aa-0.32□□□□□ -2.46
HPS3-205ENST00000478525 NAT8BQ9UHF3 227 aa-0.32□□□□□ -2.46
HPS3-205ENST00000478525 GUCA1BQ9UMX6 200 aa-0.32□□□□□ -2.46
HPS3-205ENST00000478525 PIEZO2Q9H5I5 2752 aa-0.32□□□□□ -2.46
HPS3-205ENST00000478525 TRPM1Q7Z4N2 1603 aa-0.32□□□□□ -2.46
HPS3-205ENST00000478525 SOGA1O94964 1423 aa-0.32□□□□□ -2.46
HPS3-205ENST00000478525 WRNQ14191 1432 aaPredicted RBP eCLIP-0.32□□□□□ -2.46
HPS3-205ENST00000478525 DLEC1Q9Y238 1755 aa-0.32□□□□□ -2.46
HPS3-205ENST00000478525 NISCHQ9Y2I1 1504 aa-0.33□□□□□ -2.46
HPS3-205ENST00000478525 NHSL1Q5SYE7 1610 aa-0.33□□□□□ -2.46
HPS3-205ENST00000478525 ALMS1Q8TCU4 4167 aa-0.33□□□□□ -2.46
HPS3-205ENST00000478525 TRAV12-2A0A075B6T6 113 aa-0.33□□□□□ -2.46
HPS3-205ENST00000478525 ARL5CA6NH57 179 aa-0.33□□□□□ -2.46
HPS3-205ENST00000478525 CST8O60676 142 aa-0.33□□□□□ -2.46
HPS3-205ENST00000478525 HIST1H2BKO60814 126 aa-0.33□□□□□ -2.46
HPS3-205ENST00000478525 CNIH1O95406 144 aa-0.33□□□□□ -2.46
HPS3-205ENST00000478525 IGF2P01344 180 aa-0.33□□□□□ -2.46
HPS3-205ENST00000478525 IFNA5P01569 189 aa-0.33□□□□□ -2.46
HPS3-205ENST00000478525 APOA2P02652 100 aa-0.33□□□□□ -2.46
HPS3-205ENST00000478525 TPM3P06753 285 aa-0.33□□□□□ -2.46
HPS3-205ENST00000478525 HIST1H2BJP06899 126 aa-0.33□□□□□ -2.46
HPS3-205ENST00000478525 SPRR2DP22532 72 aa-0.33□□□□□ -2.46
HPS3-205ENST00000478525 ZNF56Q15929 161 aa-0.33□□□□□ -2.46
HPS3-205ENST00000478525 TMEM97Q5BJF2 176 aa-0.33□□□□□ -2.46
HPS3-205ENST00000478525 IZUMO2Q6UXV1 221 aa-0.33□□□□□ -2.46
HPS3-205ENST00000478525 TCTEX1D1Q8N7M0 179 aa-0.33□□□□□ -2.46
HPS3-205ENST00000478525 TMEM229BQ8NBD8 167 aa-0.33□□□□□ -2.46
HPS3-205ENST00000478525 OR4B1Q8NGF8 309 aa-0.33□□□□□ -2.46
HPS3-205ENST00000478525 NEK7Q8TDX7 302 aa-0.33□□□□□ -2.46
HPS3-205ENST00000478525 C8orf76Q96K31 380 aa-0.33□□□□□ -2.46
HPS3-205ENST00000478525 VPS25Q9BRG1 176 aa-0.33□□□□□ -2.46
HPS3-205ENST00000478525 BPESC1Q9GZL8 116 aa-0.33□□□□□ -2.46
HPS3-205ENST00000478525 BIN3Q9NQY0 253 aa-0.33□□□□□ -2.46
HPS3-205ENST00000478525 LAMTOR3Q9UHA4 124 aa-0.33□□□□□ -2.46
HPS3-205ENST00000478525 TPRKBQ9Y3C4 175 aa-0.33□□□□□ -2.46
HPS3-205ENST00000478525 MYH1P12882 1939 aa-0.33□□□□□ -2.46
HPS3-205ENST00000478525 TNS1Q9HBL0 1735 aaKnown RBP-0.33□□□□□ -2.46
HPS3-205ENST00000478525 WNK1Q9H4A3 2382 aa-0.33□□□□□ -2.46
HPS3-205ENST00000478525 ANKRD31Q8N7Z5 1873 aa-0.33□□□□□ -2.46
HPS3-205ENST00000478525 ROBO3Q96MS0 1386 aa-0.33□□□□□ -2.46
HPS3-205ENST00000478525 CDK13Q14004 1512 aaKnown RBP-0.33□□□□□ -2.46
HPS3-205ENST00000478525 BSNQ9UPA5 3926 aa-0.33□□□□□ -2.46
HPS3-205ENST00000478525 DSPPQ9NZW4 1301 aa-0.34□□□□□ -2.46
HPS3-205ENST00000478525 N4BP2Q86UW6 1770 aaPredicted RBP-0.34□□□□□ -2.46
HPS3-205ENST00000478525 SPTBN2O15020 2390 aa-0.34□□□□□ -2.46
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms