RNA–Protein interactions for RNA: ENST00000475551.5

CCM2-207, Transcript of CCM2 scaffold protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CCM2, Length 2,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-207ENST00000475551 SIGLEC9Q9Y336 463 aa13.96□□□□□ -0.17
CCM2-207ENST00000475551 IGHV3-72A0A0B4J1Y9 119 aa13.96□□□□□ -0.18
CCM2-207ENST00000475551 GAGE12HA6NDE8 117 aa13.96□□□□□ -0.18
CCM2-207ENST00000475551 J3QR89 54 aa13.96□□□□□ -0.18
CCM2-207ENST00000475551 RBP4P02753 201 aa13.96□□□□□ -0.18
CCM2-207ENST00000475551 C18orf15Q96N68 181 aa13.96□□□□□ -0.18
CCM2-207ENST00000475551 CADP27708 2225 aa13.95□□□□□ -0.18
CCM2-207ENST00000475551 MRPS12O15235 138 aaKnown RBP13.95□□□□□ -0.18
CCM2-207ENST00000475551 SH2D1AO60880 128 aa13.95□□□□□ -0.18
CCM2-207ENST00000475551 ODF1Q14990 250 aa13.95□□□□□ -0.18
CCM2-207ENST00000475551 ZNF562Q6V9R5 426 aa13.95□□□□□ -0.18
CCM2-207ENST00000475551 E9PLD3 99 aa13.95□□□□□ -0.18
CCM2-207ENST00000475551 SRSF1Q07955 248 aaKnown RBP eCLIP13.95□□□□□ -0.18
CCM2-207ENST00000475551 SMAGPQ0VAQ4 97 aa13.95□□□□□ -0.18
CCM2-207ENST00000475551 COX8CQ7Z4L0 72 aa13.95□□□□□ -0.18
CCM2-207ENST00000475551 SPANXB1Q9NS25 103 aaPredicted RBP13.95□□□□□ -0.18
CCM2-207ENST00000475551 TMSB15BA0A087X1C1 80 aa13.94□□□□□ -0.18
CCM2-207ENST00000475551 A0A1B0GV72 72 aa13.94□□□□□ -0.18
CCM2-207ENST00000475551 SMKR1H3BMG3 65 aa13.94□□□□□ -0.18
CCM2-207ENST00000475551 HLA-DRB4P13762 266 aa13.94□□□□□ -0.18
CCM2-207ENST00000475551 EVI2AP22794 236 aa13.94□□□□□ -0.18
CCM2-207ENST00000475551 CNTFRP26992 372 aa13.94□□□□□ -0.18
CCM2-207ENST00000475551 DLX6P56179 175 aa13.94□□□□□ -0.18
CCM2-207ENST00000475551 CCL8P80075 99 aa13.94□□□□□ -0.18
CCM2-207ENST00000475551 LINC01559Q495D7 138 aa13.94□□□□□ -0.18
CCM2-207ENST00000475551 WFDC3Q8IUB2 231 aa13.94□□□□□ -0.18
CCM2-207ENST00000475551 CEND1Q8N111 149 aa13.94□□□□□ -0.18
CCM2-207ENST00000475551 RAXQ9Y2V3 346 aa13.94□□□□□ -0.18
CCM2-207ENST00000475551 TSSC4Q9Y5U2 329 aaPredicted RBP13.94□□□□□ -0.18
CCM2-207ENST00000475551 HLA-DRB4X5D2U9 266 aa13.94□□□□□ -0.18
CCM2-207ENST00000475551 PLXNB1O43157 2135 aa13.94□□□□□ -0.18
CCM2-207ENST00000475551 K7ERJ3 54 aa13.93□□□□□ -0.18
CCM2-207ENST00000475551 M0R3E3 92 aa13.93□□□□□ -0.18
CCM2-207ENST00000475551 CEACAM4O75871 244 aa13.93□□□□□ -0.18
CCM2-207ENST00000475551 DEFB109BQ30KR1 87 aa13.93□□□□□ -0.18
CCM2-207ENST00000475551 FDCSPQ8NFU4 85 aa13.93□□□□□ -0.18
CCM2-207ENST00000475551 SPATA25Q9BR10 227 aa13.93□□□□□ -0.18
CCM2-207ENST00000475551 TRBV25-1A0A075B6N4 114 aa13.93□□□□□ -0.18
CCM2-207ENST00000475551 TRAV17A0A0B4J275 112 aa13.93□□□□□ -0.18
CCM2-207ENST00000475551 BMI1P35226 326 aa13.93□□□□□ -0.18
CCM2-207ENST00000475551 MAP1LC3AQ9H492 121 aa13.93□□□□□ -0.18
CCM2-207ENST00000475551 A0A1W2PRD5 423 aa13.92□□□□□ -0.18
CCM2-207ENST00000475551 A0A1W2PRF3 423 aa13.92□□□□□ -0.18
CCM2-207ENST00000475551 A0A1W2PRM7 423 aa13.92□□□□□ -0.18
CCM2-207ENST00000475551 NDUFB3O43676 98 aa13.92□□□□□ -0.18
CCM2-207ENST00000475551 FCER1GP30273 86 aa13.92□□□□□ -0.18
CCM2-207ENST00000475551 PDE6HQ13956 83 aa13.92□□□□□ -0.18
CCM2-207ENST00000475551 IGFL2Q6UWQ7 119 aa13.92□□□□□ -0.18
CCM2-207ENST00000475551 PPP1R27Q86WC6 154 aa13.92□□□□□ -0.18
CCM2-207ENST00000475551 NCOR2Q9Y618 2525 aa13.92□□□□□ -0.18
CCM2-207ENST00000475551 ZNF207O43670 478 aaKnown RBP13.92□□□□□ -0.18
CCM2-207ENST00000475551 IGKCP01834 107 aa13.92□□□□□ -0.18
CCM2-207ENST00000475551 PLGLAQ15195 96 aa13.92□□□□□ -0.18
CCM2-207ENST00000475551 TWIST1Q15672 202 aa13.92□□□□□ -0.18
CCM2-207ENST00000475551 ATP6V0BQ99437 205 aa13.92□□□□□ -0.18
CCM2-207ENST00000475551 NHP2Q9NX24 153 aaKnown RBP13.92□□□□□ -0.18
CCM2-207ENST00000475551 CACNA1AO00555 2505 aa13.92□□□□□ -0.18
CCM2-207ENST00000475551 PRB4P10163 310 aaPredicted RBP13.91□□□□□ -0.18
CCM2-207ENST00000475551 ZNF491Q8N8L2 437 aa13.91□□□□□ -0.18
CCM2-207ENST00000475551 TTTY13Q9BZ97 58 aa13.91□□□□□ -0.18
CCM2-207ENST00000475551 APC2O95996 2303 aa13.91□□□□□ -0.18
CCM2-207ENST00000475551 IGLL5B9A064 214 aa13.91□□□□□ -0.18
CCM2-207ENST00000475551 TNFRSF13BO14836 293 aaPredicted RBP13.91□□□□□ -0.18
CCM2-207ENST00000475551 WFDC2Q14508 124 aa13.91□□□□□ -0.18
CCM2-207ENST00000475551 AAMDCQ9H7C9 122 aa13.91□□□□□ -0.18
CCM2-207ENST00000475551 IGHV1-8P0DP01 117 aa13.9□□□□□ -0.18
CCM2-207ENST00000475551 LEPP41159 167 aa13.9□□□□□ -0.18
CCM2-207ENST00000475551 TMEM155Q4W5P6 130 aa13.9□□□□□ -0.18
CCM2-207ENST00000475551 NUP37Q8NFH4 326 aa13.9□□□□□ -0.18
CCM2-207ENST00000475551 RNF125Q96EQ8 232 aa13.9□□□□□ -0.18
CCM2-207ENST00000475551 IGLC6P0CF74 106 aa13.9□□□□□ -0.18
CCM2-207ENST00000475551 CD40P25942 277 aa13.9□□□□□ -0.18
CCM2-207ENST00000475551 RNF185Q96GF1 192 aa13.9□□□□□ -0.18
CCM2-207ENST00000475551 NXT2Q9NPJ8 142 aaKnown RBP13.9□□□□□ -0.18
CCM2-207ENST00000475551 C17orf100A8MU93 164 aa13.89□□□□□ -0.19
CCM2-207ENST00000475551 TMEM178BH3BS89 294 aa13.89□□□□□ -0.19
CCM2-207ENST00000475551 LOXP28300 417 aaPredicted RBP13.89□□□□□ -0.19
CCM2-207ENST00000475551 TAL2Q16559 108 aa13.89□□□□□ -0.19
CCM2-207ENST00000475551 LYPD2Q6UXB3 125 aa13.89□□□□□ -0.19
CCM2-207ENST00000475551 K7EIM0 57 aa13.89□□□□□ -0.19
CCM2-207ENST00000475551 ATP5LO75964 103 aa13.89□□□□□ -0.19
CCM2-207ENST00000475551 PRSS1P07477 247 aa13.89□□□□□ -0.19
CCM2-207ENST00000475551 EGR2P11161 476 aaPredicted RBP13.89□□□□□ -0.19
CCM2-207ENST00000475551 SRSF8Q9BRL6 282 aaKnown RBP13.89□□□□□ -0.19
CCM2-207ENST00000475551 DPM2O94777 84 aa13.88□□□□□ -0.19
CCM2-207ENST00000475551 KLF17Q5JT82 389 aaPredicted RBP13.88□□□□□ -0.19
CCM2-207ENST00000475551 ZNF479Q96JC4 524 aa13.88□□□□□ -0.19
CCM2-207ENST00000475551 IL4P05112 153 aa13.88□□□□□ -0.19
CCM2-207ENST00000475551 CCDC144NLQ6NUI1 221 aa13.88□□□□□ -0.19
CCM2-207ENST00000475551 S100A7AQ86SG5 101 aa13.88□□□□□ -0.19
CCM2-207ENST00000475551 GTSCR1Q86UQ5 136 aa13.88□□□□□ -0.19
CCM2-207ENST00000475551 PRR25Q96S07 402 aa13.88□□□□□ -0.19
CCM2-207ENST00000475551 SPAG8Q99932 426 aaPredicted RBP13.88□□□□□ -0.19
CCM2-207ENST00000475551 NPIPB5A8MRT5 1133 aa13.87□□□□□ -0.19
CCM2-207ENST00000475551 SRSF2Q01130 221 aaKnown RBP13.87□□□□□ -0.19
CCM2-207ENST00000475551 ZC2HC1BQ5TFG8 222 aa13.87□□□□□ -0.19
CCM2-207ENST00000475551 CNFNQ9BYD5 112 aa13.87□□□□□ -0.19
CCM2-207ENST00000475551 CTSZQ9UBR2 303 aa13.87□□□□□ -0.19
CCM2-207ENST00000475551 ACACAQ13085 2346 aa13.87□□□□□ -0.19
CCM2-207ENST00000475551 PRSS47A8MTI9 375 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms