RNA–Protein interactions for RNA: ENST00000474006.1

CCDC93-207, Transcript of coiled-coil domain containing 93, humanhuman

TSL 3

Gene CCDC93, Length 467 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-207ENST00000474006 KRTAP4-8Q9BYQ9 185 aa5.67□□□□□ -1.5
CCDC93-207ENST00000474006 GPR61Q9BZJ8 451 aa5.67□□□□□ -1.5
CCDC93-207ENST00000474006 TMEM167BQ9NRX6 74 aa5.67□□□□□ -1.5
CCDC93-207ENST00000474006 ZNF256Q9Y2P7 627 aaPredicted RBP5.67□□□□□ -1.5
CCDC93-207ENST00000474006 TRAV2A0A0B4J234 112 aa5.66□□□□□ -1.5
CCDC93-207ENST00000474006 TRAV8-2A0A0B4J237 113 aa5.66□□□□□ -1.5
CCDC93-207ENST00000474006 PGPA6NDG6 321 aa5.66□□□□□ -1.5
CCDC93-207ENST00000474006 OR4C46A6NHA9 309 aa5.66□□□□□ -1.5
CCDC93-207ENST00000474006 G3V4G9 280 aa5.66□□□□□ -1.5
CCDC93-207ENST00000474006 SLC17A3O00476 420 aa5.66□□□□□ -1.5
CCDC93-207ENST00000474006 SOCS3O14543 225 aa5.66□□□□□ -1.5
CCDC93-207ENST00000474006 NMBP08949 121 aa5.66□□□□□ -1.5
CCDC93-207ENST00000474006 GCSHP23434 173 aa5.66□□□□□ -1.5
CCDC93-207ENST00000474006 ID1P41134 155 aa5.66□□□□□ -1.5
CCDC93-207ENST00000474006 PSMB3P49720 205 aa5.66□□□□□ -1.5
CCDC93-207ENST00000474006 KRTAP10-11P60412 298 aa5.66□□□□□ -1.5
CCDC93-207ENST00000474006 UBE2G2P60604 165 aa5.66□□□□□ -1.5
CCDC93-207ENST00000474006 PSG9Q00887 426 aa5.66□□□□□ -1.5
CCDC93-207ENST00000474006 PDE6HQ13956 83 aa5.66□□□□□ -1.5
CCDC93-207ENST00000474006 BEAN1Q3B7T3 259 aa5.66□□□□□ -1.5
CCDC93-207ENST00000474006 LCN12Q6JVE5 192 aa5.66□□□□□ -1.5
CCDC93-207ENST00000474006 EXOC3-AS1Q8N2X6 119 aa5.66□□□□□ -1.5
CCDC93-207ENST00000474006 FAM24BQ8N5W8 94 aa5.66□□□□□ -1.5
CCDC93-207ENST00000474006 C20orf173Q96LM9 149 aa5.66□□□□□ -1.5
CCDC93-207ENST00000474006 LINC00052Q96N35 136 aa5.66□□□□□ -1.5
CCDC93-207ENST00000474006 ZNF331Q9NQX6 463 aaPredicted RBP5.66□□□□□ -1.5
CCDC93-207ENST00000474006 FAM74A7A6NL05 159 aa5.65□□□□□ -1.5
CCDC93-207ENST00000474006 ZNF705FA8MVS1 300 aaPredicted RBP5.65□□□□□ -1.5
CCDC93-207ENST00000474006 ISLRO14498 428 aa5.65□□□□□ -1.5
CCDC93-207ENST00000474006 PAGE4O60829 102 aa5.65□□□□□ -1.5
CCDC93-207ENST00000474006 ZNF253O75346 499 aa5.65□□□□□ -1.5
CCDC93-207ENST00000474006 HLA-DMBP28068 263 aa5.65□□□□□ -1.5
CCDC93-207ENST00000474006 PPT1P50897 306 aa5.65□□□□□ -1.5
CCDC93-207ENST00000474006 ICAM4Q14773 271 aa5.65□□□□□ -1.5
CCDC93-207ENST00000474006 PSG3Q16557 428 aa5.65□□□□□ -1.5
CCDC93-207ENST00000474006 CLLU1Q5K131 121 aa5.65□□□□□ -1.5
CCDC93-207ENST00000474006 SAMD13Q5VXD3 122 aa5.65□□□□□ -1.5
CCDC93-207ENST00000474006 LYPD1Q8N2G4 141 aa5.65□□□□□ -1.5
CCDC93-207ENST00000474006 RNF182Q8N6D2 247 aa5.65□□□□□ -1.5
CCDC93-207ENST00000474006 SLC50A1Q9BRV3 221 aa5.65□□□□□ -1.5
CCDC93-207ENST00000474006 Q9H3A6 140 aa5.65□□□□□ -1.5
CCDC93-207ENST00000474006 GNG13Q9P2W3 67 aa5.65□□□□□ -1.5
CCDC93-207ENST00000474006 YTHDF2Q9Y5A9 579 aaKnown RBP5.65□□□□□ -1.5
CCDC93-207ENST00000474006 DNHD1Q96M86 4753 aa5.64□□□□□ -1.51
CCDC93-207ENST00000474006 A0A1W2PRE2 83 aa5.64□□□□□ -1.51
CCDC93-207ENST00000474006 CD7P09564 240 aa5.64□□□□□ -1.51
CCDC93-207ENST00000474006 ZNF688P0C7X2 276 aa5.64□□□□□ -1.51
CCDC93-207ENST00000474006 PRB4P10163 310 aaPredicted RBP5.64□□□□□ -1.51
CCDC93-207ENST00000474006 PTTG1IPP53801 180 aa5.64□□□□□ -1.51
CCDC93-207ENST00000474006 CMC4P56277 68 aaPredicted RBP5.64□□□□□ -1.51
CCDC93-207ENST00000474006 DEFB131AP59861 70 aa5.64□□□□□ -1.51
CCDC93-207ENST00000474006 SNRPD3P62318 126 aaKnown RBP5.64□□□□□ -1.51
CCDC93-207ENST00000474006 EGFEM1PQ0D2K5 195 aa5.64□□□□□ -1.51
CCDC93-207ENST00000474006 PSMG4Q5JS54 123 aa5.64□□□□□ -1.51
CCDC93-207ENST00000474006 CST9LP1Q5W188 147 aa5.64□□□□□ -1.51
CCDC93-207ENST00000474006 RARRES2Q99969 163 aa5.64□□□□□ -1.51
CCDC93-207ENST00000474006 AAMDCQ9H7C9 122 aa5.64□□□□□ -1.51
CCDC93-207ENST00000474006 OTORQ9NRC9 128 aa5.64□□□□□ -1.51
CCDC93-207ENST00000474006 CLEC5AQ9NY25 188 aa5.64□□□□□ -1.51
CCDC93-207ENST00000474006 ZMAT5Q9UDW3 170 aaKnown RBP5.64□□□□□ -1.51
CCDC93-207ENST00000474006 PKD1L1Q8TDX9 2849 aa5.64□□□□□ -1.51
CCDC93-207ENST00000474006 RBFOX3A6NFN3 312 aa5.63□□□□□ -1.51
CCDC93-207ENST00000474006 PRAC2D3DTV9 90 aa5.63□□□□□ -1.51
CCDC93-207ENST00000474006 M0R3E3 92 aa5.63□□□□□ -1.51
CCDC93-207ENST00000474006 CSN1S1P47710 185 aa5.63□□□□□ -1.51
CCDC93-207ENST00000474006 DEFB1P60022 68 aa5.63□□□□□ -1.51
CCDC93-207ENST00000474006 HAGHQ16775 308 aa5.63□□□□□ -1.51
CCDC93-207ENST00000474006 APRG1Q8IVJ8 170 aa5.63□□□□□ -1.51
CCDC93-207ENST00000474006 CCDC28AQ8IWP9 274 aa5.63□□□□□ -1.51
CCDC93-207ENST00000474006 RXFP4Q8TDU9 374 aa5.63□□□□□ -1.51
CCDC93-207ENST00000474006 RPUSD4Q96CM3 377 aaKnown RBP5.63□□□□□ -1.51
CCDC93-207ENST00000474006 NKX6-2Q9C056 277 aaPredicted RBP5.63□□□□□ -1.51
CCDC93-207ENST00000474006 MANBALQ9NQG1 85 aa5.63□□□□□ -1.51
CCDC93-207ENST00000474006 EPDR1Q9UM22 224 aa5.63□□□□□ -1.51
CCDC93-207ENST00000474006 PRELID1Q9Y255 219 aa5.63□□□□□ -1.51
CCDC93-207ENST00000474006 KNCNA6PVL3 124 aa5.62□□□□□ -1.51
CCDC93-207ENST00000474006 OR11H12B2RN74 326 aa5.62□□□□□ -1.51
CCDC93-207ENST00000474006 GGTLC3B5MD39 225 aa5.62□□□□□ -1.51
CCDC93-207ENST00000474006 DIRC3C9JPN6 131 aa5.62□□□□□ -1.51
CCDC93-207ENST00000474006 C11orf94C9JXX5 98 aa5.62□□□□□ -1.51
CCDC93-207ENST00000474006 IFNA1P01562 189 aa5.62□□□□□ -1.51
CCDC93-207ENST00000474006 SLC25A5P05141 298 aaKnown RBP5.62□□□□□ -1.51
CCDC93-207ENST00000474006 ZNF705DP0CH99 300 aaPredicted RBP5.62□□□□□ -1.51
CCDC93-207ENST00000474006 ZNF705BP0CI00 300 aaPredicted RBP5.62□□□□□ -1.51
CCDC93-207ENST00000474006 BCL2P10415 239 aa5.62□□□□□ -1.51
CCDC93-207ENST00000474006 ATP5G3P48201 142 aa5.62□□□□□ -1.51
CCDC93-207ENST00000474006 CD81P60033 236 aa5.62□□□□□ -1.51
CCDC93-207ENST00000474006 GNG5P63218 68 aa5.62□□□□□ -1.51
CCDC93-207ENST00000474006 KRTAP19-4Q3LI73 84 aa5.62□□□□□ -1.51
CCDC93-207ENST00000474006 ODF3L2Q3SX64 289 aa5.62□□□□□ -1.51
CCDC93-207ENST00000474006 GTSCR1Q86UQ5 136 aa5.62□□□□□ -1.51
CCDC93-207ENST00000474006 DEFB125Q8N687 156 aa5.62□□□□□ -1.51
CCDC93-207ENST00000474006 ZNF738Q8NE65 137 aa5.62□□□□□ -1.51
CCDC93-207ENST00000474006 CMTM2Q8TAZ6 248 aa5.62□□□□□ -1.51
CCDC93-207ENST00000474006 MRPL53Q96EL3 112 aaKnown RBP5.62□□□□□ -1.51
CCDC93-207ENST00000474006 FAM210AQ96ND0 272 aa5.62□□□□□ -1.51
CCDC93-207ENST00000474006 PRR25Q96S07 402 aa5.62□□□□□ -1.51
CCDC93-207ENST00000474006 FAM110AQ9BQ89 295 aa5.62□□□□□ -1.51
CCDC93-207ENST00000474006 EIF5A2Q9GZV4 153 aaKnown RBP5.62□□□□□ -1.51
CCDC93-207ENST00000474006 MAP6D1Q9H9H5 199 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms