RNA–Protein interactions for RNA: ENST00000468925.1

SF3B1-207, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 510 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-207ENST00000468925 SPAG17Q6Q759 2223 aa3.86□□□□□ -1.79
SF3B1-207ENST00000468925 MUC6Q6W4X9 2439 aa3.85□□□□□ -1.79
SF3B1-207ENST00000468925 BAHCC1Q9P281 2608 aa3.85□□□□□ -1.79
SF3B1-207ENST00000468925 UNC79Q9P2D8 2635 aa3.85□□□□□ -1.79
SF3B1-207ENST00000468925 TRAV2A0A0B4J234 112 aa3.85□□□□□ -1.79
SF3B1-207ENST00000468925 LILRA5A6NI73 299 aa3.85□□□□□ -1.79
SF3B1-207ENST00000468925 H3BT86 120 aa3.85□□□□□ -1.79
SF3B1-207ENST00000468925 FCGR3BO75015 233 aa3.85□□□□□ -1.79
SF3B1-207ENST00000468925 NGFP01138 241 aa3.85□□□□□ -1.79
SF3B1-207ENST00000468925 PRSS1P07477 247 aa3.85□□□□□ -1.79
SF3B1-207ENST00000468925 PSMB2P49721 201 aa3.85□□□□□ -1.79
SF3B1-207ENST00000468925 INSL3P51460 131 aa3.85□□□□□ -1.79
SF3B1-207ENST00000468925 TMEM258P61165 79 aa3.85□□□□□ -1.79
SF3B1-207ENST00000468925 ERHP84090 104 aaKnown RBP3.85□□□□□ -1.79
SF3B1-207ENST00000468925 PAX8Q06710 450 aa3.85□□□□□ -1.79
SF3B1-207ENST00000468925 DIAPH2-AS1Q14236 149 aa3.85□□□□□ -1.79
SF3B1-207ENST00000468925 ATXN8Q156A1 80 aa3.85□□□□□ -1.79
SF3B1-207ENST00000468925 C3AR1Q16581 482 aa3.85□□□□□ -1.79
SF3B1-207ENST00000468925 C10orf113Q5VZT2 155 aa3.85□□□□□ -1.79
SF3B1-207ENST00000468925 FAM104BQ5XKR9 115 aa3.85□□□□□ -1.79
SF3B1-207ENST00000468925 ACP7Q6ZNF0 438 aa3.85□□□□□ -1.79
SF3B1-207ENST00000468925 C10orf126Q8N4M7 172 aa3.85□□□□□ -1.79
SF3B1-207ENST00000468925 DEFB123Q8N688 67 aa3.85□□□□□ -1.79
SF3B1-207ENST00000468925 TIMD4Q96H15 378 aa3.85□□□□□ -1.79
SF3B1-207ENST00000468925 FAM167A-AS1Q96KT0 104 aa3.85□□□□□ -1.79
SF3B1-207ENST00000468925 S1PR3Q99500 378 aa3.85□□□□□ -1.79
SF3B1-207ENST00000468925 MRPL20Q9BYC9 149 aaKnown RBP3.85□□□□□ -1.79
SF3B1-207ENST00000468925 PRRG4Q9BZD6 226 aa3.85□□□□□ -1.79
SF3B1-207ENST00000468925 PRO3102Q9H379 93 aa3.85□□□□□ -1.79
SF3B1-207ENST00000468925 PPDPFQ9H3Y8 114 aa3.85□□□□□ -1.79
SF3B1-207ENST00000468925 OTORQ9NRC9 128 aa3.85□□□□□ -1.79
SF3B1-207ENST00000468925 TMEM14BQ9NUH8 114 aa3.85□□□□□ -1.79
SF3B1-207ENST00000468925 CCL26Q9Y258 94 aa3.85□□□□□ -1.79
SF3B1-207ENST00000468925 F11RQ9Y624 299 aaKnown RBP3.85□□□□□ -1.79
SF3B1-207ENST00000468925 PGPA6NDG6 321 aa3.84□□□□□ -1.79
SF3B1-207ENST00000468925 C17orf98A8MV24 154 aa3.84□□□□□ -1.79
SF3B1-207ENST00000468925 SLC25A20O43772 301 aa3.84□□□□□ -1.79
SF3B1-207ENST00000468925 ZFAND5O76080 213 aa3.84□□□□□ -1.79
SF3B1-207ENST00000468925 CRYGDP07320 174 aa3.84□□□□□ -1.79
SF3B1-207ENST00000468925 CRYGAP11844 174 aa3.84□□□□□ -1.79
SF3B1-207ENST00000468925 SLC25A16P16260 332 aa3.84□□□□□ -1.79
SF3B1-207ENST00000468925 ZNF32P17041 273 aa3.84□□□□□ -1.79
SF3B1-207ENST00000468925 IFI27P40305 119 aaPredicted RBP3.84□□□□□ -1.79
SF3B1-207ENST00000468925 TNFRSF4P43489 277 aa3.84□□□□□ -1.79
SF3B1-207ENST00000468925 HERVK_113P61574 105 aa3.84□□□□□ -1.79
SF3B1-207ENST00000468925 PRCDQ00LT1 54 aa3.84□□□□□ -1.79
SF3B1-207ENST00000468925 DEFB121Q5J5C9 76 aa3.84□□□□□ -1.79
SF3B1-207ENST00000468925 C9orf153Q5TBE3 101 aa3.84□□□□□ -1.79
SF3B1-207ENST00000468925 ZC2HC1BQ5TFG8 222 aa3.84□□□□□ -1.79
SF3B1-207ENST00000468925 Q6ZR03 302 aa3.84□□□□□ -1.79
SF3B1-207ENST00000468925 COX8CQ7Z4L0 72 aa3.84□□□□□ -1.79
SF3B1-207ENST00000468925 ANKRD29Q8N6D5 301 aa3.84□□□□□ -1.79
SF3B1-207ENST00000468925 TMEM75Q8N9X5 138 aa3.84□□□□□ -1.79
SF3B1-207ENST00000468925 COPS9Q8WXC6 57 aa3.84□□□□□ -1.79
SF3B1-207ENST00000468925 ZC2HC1AQ96GY0 325 aa3.84□□□□□ -1.79
SF3B1-207ENST00000468925 CARD19Q96LW7 228 aa3.84□□□□□ -1.79
SF3B1-207ENST00000468925 DUX3Q96PT4 197 aa3.84□□□□□ -1.79
SF3B1-207ENST00000468925 GPHA2Q96T91 129 aa3.84□□□□□ -1.79
SF3B1-207ENST00000468925 LINC01587Q99440 93 aa3.84□□□□□ -1.79
SF3B1-207ENST00000468925 KIR2DL4Q99706 377 aa3.84□□□□□ -1.79
SF3B1-207ENST00000468925 AAMDCQ9H7C9 122 aa3.84□□□□□ -1.79
SF3B1-207ENST00000468925 TMEM14CQ9P0S9 112 aa3.84□□□□□ -1.79
SF3B1-207ENST00000468925 CHCHD2Q9Y6H1 151 aaPredicted RBP3.84□□□□□ -1.79
SF3B1-207ENST00000468925 TNRC6BQ9UPQ9 1833 aaKnown RBP3.84□□□□□ -1.8
SF3B1-207ENST00000468925 NCOR1O75376 2440 aa3.83□□□□□ -1.8
SF3B1-207ENST00000468925 CHD8Q9HCK8 2581 aa3.83□□□□□ -1.8
SF3B1-207ENST00000468925 CFAP54Q96N23 3096 aa3.83□□□□□ -1.8
SF3B1-207ENST00000468925 IGHV3OR15-7A0A075B7D8 119 aa3.83□□□□□ -1.8
SF3B1-207ENST00000468925 A0A096LNJ9 63 aa3.83□□□□□ -1.8
SF3B1-207ENST00000468925 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.83□□□□□ -1.8
SF3B1-207ENST00000468925 LOC107984156A0A0G2JMH3 177 aa3.83□□□□□ -1.8
SF3B1-207ENST00000468925 C5orf63A6NC05 138 aa3.83□□□□□ -1.8
SF3B1-207ENST00000468925 NDUFC2-KCTD14E9PQ53 114 aa3.83□□□□□ -1.8
SF3B1-207ENST00000468925 F5H768 121 aa3.83□□□□□ -1.8
SF3B1-207ENST00000468925 H7C1H1 209 aa3.83□□□□□ -1.8
SF3B1-207ENST00000468925 K7ERJ3 54 aa3.83□□□□□ -1.8
SF3B1-207ENST00000468925 SS18L1O75177 396 aaPredicted RBP3.83□□□□□ -1.8
SF3B1-207ENST00000468925 TCRAP04437 139 aa3.83□□□□□ -1.8
SF3B1-207ENST00000468925 CECR9P0C854 216 aa3.83□□□□□ -1.8
SF3B1-207ENST00000468925 DEFA4P12838 97 aa3.83□□□□□ -1.8
SF3B1-207ENST00000468925 CA6P23280 308 aa3.83□□□□□ -1.8
SF3B1-207ENST00000468925 CKS2P33552 79 aa3.83□□□□□ -1.8
SF3B1-207ENST00000468925 TEX36Q5VZQ5 186 aa3.83□□□□□ -1.8
SF3B1-207ENST00000468925 HIST2H2BCQ6DN03 193 aa3.83□□□□□ -1.8
SF3B1-207ENST00000468925 HIST2H2BDQ6DRA6 164 aa3.83□□□□□ -1.8
SF3B1-207ENST00000468925 FAM19A5Q7Z5A7 132 aaPredicted RBP3.83□□□□□ -1.8
SF3B1-207ENST00000468925 ARL17AQ8IVW1 177 aa3.83□□□□□ -1.8
SF3B1-207ENST00000468925 AMN1Q8IY45 258 aa3.83□□□□□ -1.8
SF3B1-207ENST00000468925 THAP8Q8NA92 274 aa3.83□□□□□ -1.8
SF3B1-207ENST00000468925 FAM57AQ8TBR7 257 aa3.83□□□□□ -1.8
SF3B1-207ENST00000468925 BAALCQ8WXS3 180 aa3.83□□□□□ -1.8
SF3B1-207ENST00000468925 FXYD5Q96DB9 178 aa3.83□□□□□ -1.8
SF3B1-207ENST00000468925 SIRPDQ9H106 197 aa3.83□□□□□ -1.8
SF3B1-207ENST00000468925 TANC2Q9HCD6 1990 aa3.82□□□□□ -1.8
SF3B1-207ENST00000468925 TRAV4A0A0B4J268 109 aa3.82□□□□□ -1.8
SF3B1-207ENST00000468925 TRBV10-2A0A0K0K1G8 114 aa3.82□□□□□ -1.8
SF3B1-207ENST00000468925 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP3.82□□□□□ -1.8
SF3B1-207ENST00000468925 WI2-2373I1.2A0A1W2PRP0 233 aa3.82□□□□□ -1.8
SF3B1-207ENST00000468925 D6R8Y8 96 aa3.82□□□□□ -1.8
SF3B1-207ENST00000468925 F8VRH5 84 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 90.9 ms