RNA–Protein interactions for RNA: ENST00000467272.6

UBR4-211, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 891 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-211ENST00000467272 LRCOL1A6NCL2 159 aa8.22□□□□□ -1.09
UBR4-211ENST00000467272 KRTAP29-1A8MX34 341 aaPredicted RBP8.22□□□□□ -1.09
UBR4-211ENST00000467272 KLLNB2CW77 178 aa8.22□□□□□ -1.09
UBR4-211ENST00000467272 H3BQ15 152 aa8.22□□□□□ -1.09
UBR4-211ENST00000467272 RGS5O15539 181 aa8.22□□□□□ -1.09
UBR4-211ENST00000467272 CCNKO75909 580 aa8.22□□□□□ -1.09
UBR4-211ENST00000467272 IFNA5P01569 189 aa8.22□□□□□ -1.09
UBR4-211ENST00000467272 OR5G3P0C626 314 aa8.22□□□□□ -1.09
UBR4-211ENST00000467272 IL18Q14116 193 aa8.22□□□□□ -1.09
UBR4-211ENST00000467272 ANXA2RQ3ZCQ2 193 aa8.22□□□□□ -1.09
UBR4-211ENST00000467272 PXDC1Q5TGL8 231 aa8.22□□□□□ -1.09
UBR4-211ENST00000467272 Q6ZSN1 163 aa8.22□□□□□ -1.09
UBR4-211ENST00000467272 TMEM37Q8WXS4 190 aa8.22□□□□□ -1.09
UBR4-211ENST00000467272 TRIM63Q969Q1 353 aa8.22□□□□□ -1.09
UBR4-211ENST00000467272 ST6GAL2Q96JF0 529 aa8.22□□□□□ -1.09
UBR4-211ENST00000467272 ARL6Q9H0F7 186 aa8.22□□□□□ -1.09
UBR4-211ENST00000467272 GSN-AS1Q9NRJ2 163 aa8.22□□□□□ -1.09
UBR4-211ENST00000467272 TRAV12-3A0A0B4J271 114 aa8.21□□□□□ -1.1
UBR4-211ENST00000467272 FAM229AH3BQW9 127 aa8.21□□□□□ -1.1
UBR4-211ENST00000467272 SFT2D2O95562 160 aa8.21□□□□□ -1.1
UBR4-211ENST00000467272 PPP1R1AQ13522 171 aa8.21□□□□□ -1.1
UBR4-211ENST00000467272 LINC00305Q7Z4B0 112 aa8.21□□□□□ -1.1
UBR4-211ENST00000467272 ZNF680Q8NEM1 530 aa8.21□□□□□ -1.1
UBR4-211ENST00000467272 LRRC20Q8TCA0 184 aa8.21□□□□□ -1.1
UBR4-211ENST00000467272 DIRAS2Q96HU8 199 aa8.21□□□□□ -1.1
UBR4-211ENST00000467272 SMIM8Q96KF7 97 aa8.21□□□□□ -1.1
UBR4-211ENST00000467272 NPVFQ9HCQ7 196 aa8.21□□□□□ -1.1
UBR4-211ENST00000467272 MCUBQ9NWR8 336 aa8.21□□□□□ -1.1
UBR4-211ENST00000467272 RSL24D1Q9UHA3 163 aaKnown RBP8.21□□□□□ -1.1
UBR4-211ENST00000467272 RNF24Q9Y225 148 aa8.21□□□□□ -1.1
UBR4-211ENST00000467272 FUT9Q9Y231 359 aa8.21□□□□□ -1.1
UBR4-211ENST00000467272 TRGV2A0A075B6R0 118 aa8.2□□□□□ -1.1
UBR4-211ENST00000467272 SNRPCP09234 159 aaKnown RBP8.2□□□□□ -1.1
UBR4-211ENST00000467272 LEPP41159 167 aa8.2□□□□□ -1.1
UBR4-211ENST00000467272 CRYBA4P53673 196 aa8.2□□□□□ -1.1
UBR4-211ENST00000467272 TCL1AP56279 114 aa8.2□□□□□ -1.1
UBR4-211ENST00000467272 POLR2GP62487 172 aaKnown RBP eCLIP8.2□□□□□ -1.1
UBR4-211ENST00000467272 HAMPP81172 84 aa8.2□□□□□ -1.1
UBR4-211ENST00000467272 FHL2Q14192 279 aa8.2□□□□□ -1.1
UBR4-211ENST00000467272 S100A7AQ86SG5 101 aa8.2□□□□□ -1.1
UBR4-211ENST00000467272 BPIFA4PQ86YQ2 179 aa8.2□□□□□ -1.1
UBR4-211ENST00000467272 DYNC2LI1Q8TCX1 351 aa8.2□□□□□ -1.1
UBR4-211ENST00000467272 MSRB1Q9NZV6 116 aa8.2□□□□□ -1.1
UBR4-211ENST00000467272 KLF12Q9Y4X4 402 aa8.2□□□□□ -1.1
UBR4-211ENST00000467272 PXMP4Q9Y6I8 212 aa8.2□□□□□ -1.1
UBR4-211ENST00000467272 ICOSQ9Y6W8 199 aa8.2□□□□□ -1.1
UBR4-211ENST00000467272 H3BTX0 84 aa8.19□□□□□ -1.1
UBR4-211ENST00000467272 PAX4O43316 350 aa8.19□□□□□ -1.1
UBR4-211ENST00000467272 SLC25A5P05141 298 aaKnown RBP8.19□□□□□ -1.1
UBR4-211ENST00000467272 HOXB5P09067 269 aa8.19□□□□□ -1.1
UBR4-211ENST00000467272 ANXA7P20073 488 aaKnown RBP8.19□□□□□ -1.1
UBR4-211ENST00000467272 SLC38A11Q08AI6 406 aa8.19□□□□□ -1.1
UBR4-211ENST00000467272 ARL16Q0P5N6 197 aa8.19□□□□□ -1.1
UBR4-211ENST00000467272 OPCMLQ14982 345 aa8.19□□□□□ -1.1
UBR4-211ENST00000467272 VGLL1Q99990 258 aa8.19□□□□□ -1.1
UBR4-211ENST00000467272 FAM30AQ9NZY2 134 aa8.19□□□□□ -1.1
UBR4-211ENST00000467272 CCDC59Q9P031 241 aaKnown RBP8.19□□□□□ -1.1
UBR4-211ENST00000467272 PRO0255Q9UI72 69 aa8.19□□□□□ -1.1
UBR4-211ENST00000467272 RNF213Q63HN8 5207 aa8.18□□□□□ -1.1
UBR4-211ENST00000467272 TRGV1A0A0A0MS02 117 aa8.18□□□□□ -1.1
UBR4-211ENST00000467272 SMCO3A2RU48 225 aa8.18□□□□□ -1.1
UBR4-211ENST00000467272 C7orf71A4D174 169 aa8.18□□□□□ -1.1
UBR4-211ENST00000467272 ZNF253O75346 499 aa8.18□□□□□ -1.1
UBR4-211ENST00000467272 CRISP2P16562 243 aa8.18□□□□□ -1.1
UBR4-211ENST00000467272 VAMP1P23763 118 aa8.18□□□□□ -1.1
UBR4-211ENST00000467272 CD300CQ08708 224 aa8.18□□□□□ -1.1
UBR4-211ENST00000467272 IBA57Q5T440 356 aaKnown RBP8.18□□□□□ -1.1
UBR4-211ENST00000467272 WFDC10BQ8IUB3 73 aa8.18□□□□□ -1.1
UBR4-211ENST00000467272 IQCF2Q8IXL9 164 aa8.18□□□□□ -1.1
UBR4-211ENST00000467272 NTN5Q8WTR8 489 aaPredicted RBP8.18□□□□□ -1.1
UBR4-211ENST00000467272 MRPL53Q96EL3 112 aaKnown RBP8.18□□□□□ -1.1
UBR4-211ENST00000467272 SLC25A21Q9BQT8 299 aaPredicted RBP8.18□□□□□ -1.1
UBR4-211ENST00000467272 SLIRPQ9GZT3 109 aaKnown RBP8.18□□□□□ -1.1
UBR4-211ENST00000467272 PSENENQ9NZ42 101 aa8.18□□□□□ -1.1
UBR4-211ENST00000467272 LY96Q9Y6Y9 160 aa8.18□□□□□ -1.1
UBR4-211ENST00000467272 TRAV9-2A0A087WT02 112 aa8.17□□□□□ -1.1
UBR4-211ENST00000467272 J3QL48 77 aa8.17□□□□□ -1.1
UBR4-211ENST00000467272 AGPAT2O15120 278 aa8.17□□□□□ -1.1
UBR4-211ENST00000467272 C1QBP02746 253 aa8.17□□□□□ -1.1
UBR4-211ENST00000467272 TNFSF8P32971 234 aa8.17□□□□□ -1.1
UBR4-211ENST00000467272 RRAS2P62070 204 aaPredicted RBP8.17□□□□□ -1.1
UBR4-211ENST00000467272 MRPL23Q16540 153 aaKnown RBP8.17□□□□□ -1.1
UBR4-211ENST00000467272 GUK1Q16774 197 aa8.17□□□□□ -1.1
UBR4-211ENST00000467272 Q6ZSA8 131 aa8.17□□□□□ -1.1
UBR4-211ENST00000467272 NEGR1Q7Z3B1 354 aa8.17□□□□□ -1.1
UBR4-211ENST00000467272 ZNF546Q86UE3 836 aa8.17□□□□□ -1.1
UBR4-211ENST00000467272 EIF4E3Q8N5X7 224 aaKnown RBP8.17□□□□□ -1.1
UBR4-211ENST00000467272 DEDD2Q8WXF8 326 aa8.17□□□□□ -1.1
UBR4-211ENST00000467272 MGST2Q99735 147 aa8.17□□□□□ -1.1
UBR4-211ENST00000467272 GGACTQ9BVM4 153 aa8.17□□□□□ -1.1
UBR4-211ENST00000467272 TP53TG3Q9ULZ0 132 aa8.17□□□□□ -1.1
UBR4-211ENST00000467272 HHLA3Q9XRX5 114 aa8.17□□□□□ -1.1
UBR4-211ENST00000467272 J3KRW8 73 aa8.16□□□□□ -1.1
UBR4-211ENST00000467272 K7EQD1 137 aa8.16□□□□□ -1.1
UBR4-211ENST00000467272 PRAF2O60831 178 aa8.16□□□□□ -1.1
UBR4-211ENST00000467272 NDUFB4O95168 129 aa8.16□□□□□ -1.1
UBR4-211ENST00000467272 NMBP08949 121 aa8.16□□□□□ -1.1
UBR4-211ENST00000467272 OR4E1P0C645 316 aa8.16□□□□□ -1.1
UBR4-211ENST00000467272 METTL15P1P0C7V9 234 aa8.16□□□□□ -1.1
UBR4-211ENST00000467272 TAS2R30P59541 319 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms