RNA–Protein interactions for RNA: ENST00000466732.2

VPS13D-203, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 5

Gene VPS13D, Length 377 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-203ENST00000466732 IL15RAQ13261 267 aa2.38□□□□□ -2.03
VPS13D-203ENST00000466732 EBI3Q14213 229 aa2.38□□□□□ -2.03
VPS13D-203ENST00000466732 RALGAPA2Q2PPJ7 1873 aa2.38□□□□□ -2.03
VPS13D-203ENST00000466732 VMA21Q3ZAQ7 101 aa2.38□□□□□ -2.03
VPS13D-203ENST00000466732 FAM201AQ5SY85 155 aa2.38□□□□□ -2.03
VPS13D-203ENST00000466732 C12orf73Q69YU5 71 aa2.38□□□□□ -2.03
VPS13D-203ENST00000466732 TMEM136Q6ZRR5 245 aa2.38□□□□□ -2.03
VPS13D-203ENST00000466732 CYP2G1PQ6ZSU1 146 aa2.38□□□□□ -2.03
VPS13D-203ENST00000466732 RFLNAQ6ZTI6 216 aa2.38□□□□□ -2.03
VPS13D-203ENST00000466732 KRTAP5-2Q701N4 177 aa2.38□□□□□ -2.03
VPS13D-203ENST00000466732 PRSS41Q7RTY9 318 aa2.38□□□□□ -2.03
VPS13D-203ENST00000466732 LHFPL1Q86WI0 220 aa2.38□□□□□ -2.03
VPS13D-203ENST00000466732 RPS19BP1Q86WX3 136 aaKnown RBP2.38□□□□□ -2.03
VPS13D-203ENST00000466732 SGPP2Q8IWX5 399 aa2.38□□□□□ -2.03
VPS13D-203ENST00000466732 PIANPQ8IYJ0 282 aa2.38□□□□□ -2.03
VPS13D-203ENST00000466732 SLC25A45Q8N413 288 aa2.38□□□□□ -2.03
VPS13D-203ENST00000466732 NUP35Q8NFH5 326 aa2.38□□□□□ -2.03
VPS13D-203ENST00000466732 OR8B3Q8NGG8 313 aa2.38□□□□□ -2.03
VPS13D-203ENST00000466732 PHF3Q92576 2039 aaKnown RBP2.38□□□□□ -2.03
VPS13D-203ENST00000466732 ZC2HC1AQ96GY0 325 aa2.38□□□□□ -2.03
VPS13D-203ENST00000466732 OR8B2Q96RD0 313 aa2.38□□□□□ -2.03
VPS13D-203ENST00000466732 MRPL20Q9BYC9 149 aaKnown RBP2.38□□□□□ -2.03
VPS13D-203ENST00000466732 CMC2Q9NRP2 79 aa2.38□□□□□ -2.03
VPS13D-203ENST00000466732 LAMTOR3Q9UHA4 124 aa2.38□□□□□ -2.03
VPS13D-203ENST00000466732 NCOA6Q14686 2063 aaPredicted RBP2.38□□□□□ -2.03
VPS13D-203ENST00000466732 DSPPQ9NZW4 1301 aa2.38□□□□□ -2.03
VPS13D-203ENST00000466732 SSC5DA1L4H1 1573 aa2.37□□□□□ -2.03
VPS13D-203ENST00000466732 IGLV3-16A0A075B6K0 115 aa2.37□□□□□ -2.03
VPS13D-203ENST00000466732 IGHV1OR15-1A0A075B7D0 117 aa2.37□□□□□ -2.03
VPS13D-203ENST00000466732 A0A0J9YXY3 114 aa2.37□□□□□ -2.03
VPS13D-203ENST00000466732 A0A0U1RQV1 116 aa2.37□□□□□ -2.03
VPS13D-203ENST00000466732 TEX50A0A1B0GTY4 177 aa2.37□□□□□ -2.03
VPS13D-203ENST00000466732 OOSP1A8MZH6 123 aa2.37□□□□□ -2.03
VPS13D-203ENST00000466732 P01737 135 aa2.37□□□□□ -2.03
VPS13D-203ENST00000466732 IGHV3-48P01763 117 aa2.37□□□□□ -2.03
VPS13D-203ENST00000466732 TRACP01848 142 aa2.37□□□□□ -2.03
VPS13D-203ENST00000466732 RBP4P02753 201 aa2.37□□□□□ -2.03
VPS13D-203ENST00000466732 CD3DP04234 171 aa2.37□□□□□ -2.03
VPS13D-203ENST00000466732 OR5AL1P0C617 328 aa2.37□□□□□ -2.03
VPS13D-203ENST00000466732 FGF6P10767 208 aa2.37□□□□□ -2.03
VPS13D-203ENST00000466732 CRYGSP22914 178 aa2.37□□□□□ -2.03
VPS13D-203ENST00000466732 FKBP2P26885 142 aaKnown RBP2.37□□□□□ -2.03
VPS13D-203ENST00000466732 PRDX1Q06830 199 aaKnown RBP2.37□□□□□ -2.03
VPS13D-203ENST00000466732 Q56UQ5 140 aa2.37□□□□□ -2.03
VPS13D-203ENST00000466732 HES3Q5TGS1 186 aa2.37□□□□□ -2.03
VPS13D-203ENST00000466732 FKBP1CQ5VVH2 108 aa2.37□□□□□ -2.03
VPS13D-203ENST00000466732 NCBP2-AS2Q69YL0 99 aa2.37□□□□□ -2.03
VPS13D-203ENST00000466732 PVRIGQ6DKI7 326 aa2.37□□□□□ -2.03
VPS13D-203ENST00000466732 C2orf91Q6ZV80 131 aa2.37□□□□□ -2.03
VPS13D-203ENST00000466732 TCF23Q7RTU1 214 aa2.37□□□□□ -2.03
VPS13D-203ENST00000466732 AAED1Q7RTV5 226 aa2.37□□□□□ -2.03
VPS13D-203ENST00000466732 HSD11B1LQ7Z5J1 315 aa2.37□□□□□ -2.03
VPS13D-203ENST00000466732 TEN1Q86WV5 123 aa2.37□□□□□ -2.03
VPS13D-203ENST00000466732 ZCCHC24Q8N2G6 241 aaKnown RBP2.37□□□□□ -2.03
VPS13D-203ENST00000466732 ANKRD29Q8N6D5 301 aa2.37□□□□□ -2.03
VPS13D-203ENST00000466732 CLDND2Q8NHS1 167 aa2.37□□□□□ -2.03
VPS13D-203ENST00000466732 FAM213BQ8TBF2 198 aa2.37□□□□□ -2.03
VPS13D-203ENST00000466732 C2orf50Q96LR7 162 aa2.37□□□□□ -2.03
VPS13D-203ENST00000466732 FAM103A1Q9BTL3 118 aaKnown RBP2.37□□□□□ -2.03
VPS13D-203ENST00000466732 EMC6Q9BV81 110 aa2.37□□□□□ -2.03
VPS13D-203ENST00000466732 TMEM147Q9BVK8 224 aa2.37□□□□□ -2.03
VPS13D-203ENST00000466732 PLA2G2FQ9BZM2 168 aa2.37□□□□□ -2.03
VPS13D-203ENST00000466732 IMUPQ9GZP8 106 aa2.37□□□□□ -2.03
VPS13D-203ENST00000466732 NEUROG3Q9Y4Z2 214 aa2.37□□□□□ -2.03
VPS13D-203ENST00000466732 HES2Q9Y543 173 aa2.37□□□□□ -2.03
VPS13D-203ENST00000466732 DNAJC15Q9Y5T4 150 aa2.37□□□□□ -2.03
VPS13D-203ENST00000466732 SCN3AQ9NY46 2000 aa2.37□□□□□ -2.03
VPS13D-203ENST00000466732 LTBP1Q14766 1721 aa2.37□□□□□ -2.03
VPS13D-203ENST00000466732 KIAA2026Q5HYC2 2103 aa2.36□□□□□ -2.03
VPS13D-203ENST00000466732 C2orf16Q68DN1 1984 aa2.36□□□□□ -2.03
VPS13D-203ENST00000466732 TRAV27A0A087WT01 109 aa2.36□□□□□ -2.03
VPS13D-203ENST00000466732 TRAV13-1A0A0B4J241 112 aa2.36□□□□□ -2.03
VPS13D-203ENST00000466732 TRAV4A0A0B4J268 109 aa2.36□□□□□ -2.03
VPS13D-203ENST00000466732 TRBV7-7A0A0K0K1E9 115 aa2.36□□□□□ -2.03
VPS13D-203ENST00000466732 FAM240AA0A1B0GVK7 77 aa2.36□□□□□ -2.03
VPS13D-203ENST00000466732 RBAKDNA6NC62 111 aa2.36□□□□□ -2.03
VPS13D-203ENST00000466732 NCBP2LA6PVI3 153 aaKnown RBP2.36□□□□□ -2.03
VPS13D-203ENST00000466732 A8MT66 165 aa2.36□□□□□ -2.03
VPS13D-203ENST00000466732 A8MWL6 223 aa2.36□□□□□ -2.03
VPS13D-203ENST00000466732 NDUFC2-KCTD14E9PQ53 114 aa2.36□□□□□ -2.03
VPS13D-203ENST00000466732 M0R129 80 aa2.36□□□□□ -2.03
VPS13D-203ENST00000466732 FCN1O00602 326 aa2.36□□□□□ -2.03
VPS13D-203ENST00000466732 LYZL6O75951 148 aa2.36□□□□□ -2.03
VPS13D-203ENST00000466732 IGHG2P01859 326 aa2.36□□□□□ -2.03
VPS13D-203ENST00000466732 COX7CP15954 63 aa2.36□□□□□ -2.03
VPS13D-203ENST00000466732 HLA-DMBP28068 263 aa2.36□□□□□ -2.03
VPS13D-203ENST00000466732 MPV17P39210 176 aa2.36□□□□□ -2.03
VPS13D-203ENST00000466732 UBE2E1P51965 193 aa2.36□□□□□ -2.03
VPS13D-203ENST00000466732 RPL23P62829 140 aaKnown RBP2.36□□□□□ -2.03
VPS13D-203ENST00000466732 C12orf74Q32Q52 190 aa2.36□□□□□ -2.03
VPS13D-203ENST00000466732 TMEM52BQ4KMG9 183 aa2.36□□□□□ -2.03
VPS13D-203ENST00000466732 MRPL2Q5T653 305 aaKnown RBP2.36□□□□□ -2.03
VPS13D-203ENST00000466732 LINC01561Q8N1V8 128 aa2.36□□□□□ -2.03
VPS13D-203ENST00000466732 C3orf56Q8N813 242 aa2.36□□□□□ -2.03
VPS13D-203ENST00000466732 OR10AC1Q8NH08 325 aa2.36□□□□□ -2.03
VPS13D-203ENST00000466732 RPS4Y2Q8TD47 263 aa2.36□□□□□ -2.03
VPS13D-203ENST00000466732 BORCS8Q96FH0 119 aa2.36□□□□□ -2.03
VPS13D-203ENST00000466732 FMC1Q96HJ9 113 aa2.36□□□□□ -2.03
VPS13D-203ENST00000466732 UBE2E2Q96LR5 201 aa2.36□□□□□ -2.03
VPS13D-203ENST00000466732 AGPAT4-IT1Q9H0P7 198 aa2.36□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms