RNA–Protein interactions for RNA: ENST00000466171.1

CCDC93-205, Transcript of coiled-coil domain containing 93, humanhuman

TSL 3

Gene CCDC93, Length 477 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-205ENST00000466171 LIMD2Q9BT23 127 aa0.44□□□□□ -2.34
CCDC93-205ENST00000466171 TCEAL2Q9H3H9 227 aaPredicted RBP0.44□□□□□ -2.34
CCDC93-205ENST00000466171 BOLA2Q9H3K6 86 aa0.44□□□□□ -2.34
CCDC93-205ENST00000466171 LAMTOR3Q9UHA4 124 aa0.44□□□□□ -2.34
CCDC93-205ENST00000466171 NAT8BQ9UHF3 227 aa0.44□□□□□ -2.34
CCDC93-205ENST00000466171 TPRKBQ9Y3C4 175 aa0.44□□□□□ -2.34
CCDC93-205ENST00000466171 TRPM1Q7Z4N2 1603 aa0.44□□□□□ -2.34
CCDC93-205ENST00000466171 YTHDC2Q9H6S0 1430 aaKnown RBP0.44□□□□□ -2.34
CCDC93-205ENST00000466171 MYLKQ15746 1914 aa0.44□□□□□ -2.34
CCDC93-205ENST00000466171 RFX7Q2KHR2 1363 aa0.44□□□□□ -2.34
CCDC93-205ENST00000466171 PLXNA4Q9HCM2 1894 aa0.44□□□□□ -2.34
CCDC93-205ENST00000466171 SIP14410 1827 aa0.43□□□□□ -2.34
CCDC93-205ENST00000466171 LAMA4Q16363 1823 aa0.43□□□□□ -2.34
CCDC93-205ENST00000466171 KIAA1549Q9HCM3 1950 aa0.43□□□□□ -2.34
CCDC93-205ENST00000466171 CASP8AP2Q9UKL3 1982 aa0.43□□□□□ -2.34
CCDC93-205ENST00000466171 NUPR2A6NF83 97 aa0.43□□□□□ -2.34
CCDC93-205ENST00000466171 H7BYZ3 331 aa0.43□□□□□ -2.34
CCDC93-205ENST00000466171 IGLV3-1P01715 115 aa0.43□□□□□ -2.34
CCDC93-205ENST00000466171 CD14P08571 375 aa0.43□□□□□ -2.34
CCDC93-205ENST00000466171 FABP4P15090 132 aa0.43□□□□□ -2.34
CCDC93-205ENST00000466171 S100A11P31949 105 aa0.43□□□□□ -2.34
CCDC93-205ENST00000466171 SPATA45Q537H7 98 aa0.43□□□□□ -2.34
CCDC93-205ENST00000466171 HRCT1Q6UXD1 115 aa0.43□□□□□ -2.34
CCDC93-205ENST00000466171 TEX29Q8N6K0 151 aa0.43□□□□□ -2.34
CCDC93-205ENST00000466171 OR5H6Q8NGV6 325 aa0.43□□□□□ -2.34
CCDC93-205ENST00000466171 GRPEL2Q8TAA5 225 aa0.43□□□□□ -2.34
CCDC93-205ENST00000466171 EFCAB11Q9BUY7 163 aa0.43□□□□□ -2.34
CCDC93-205ENST00000466171 CCDC32Q9BV29 185 aa0.43□□□□□ -2.34
CCDC93-205ENST00000466171 CST11Q9H112 138 aa0.43□□□□□ -2.34
CCDC93-205ENST00000466171 TAF9BQ9HBM6 251 aa0.43□□□□□ -2.34
CCDC93-205ENST00000466171 IL20Q9NYY1 176 aa0.43□□□□□ -2.34
CCDC93-205ENST00000466171 NUBP2Q9Y5Y2 271 aa0.43□□□□□ -2.34
CCDC93-205ENST00000466171 V9GYQ6 96 aa0.43□□□□□ -2.34
CCDC93-205ENST00000466171 ERBINQ96RT1 1412 aa0.43□□□□□ -2.34
CCDC93-205ENST00000466171 RTL9Q8NET4 1388 aa0.43□□□□□ -2.34
CCDC93-205ENST00000466171 NISCHQ9Y2I1 1504 aa0.43□□□□□ -2.34
CCDC93-205ENST00000466171 EML5Q05BV3 1969 aa0.43□□□□□ -2.34
CCDC93-205ENST00000466171 HEATR1Q9H583 2144 aaKnown RBP0.43□□□□□ -2.34
CCDC93-205ENST00000466171 TRAPPC8Q9Y2L5 1435 aa0.42□□□□□ -2.34
CCDC93-205ENST00000466171 C3orf85A0A1B0GTC6 90 aa0.42□□□□□ -2.34
CCDC93-205ENST00000466171 A0A1B0GV72 72 aa0.42□□□□□ -2.34
CCDC93-205ENST00000466171 A0A1W2PPM0 123 aa0.42□□□□□ -2.34
CCDC93-205ENST00000466171 PRB4P10163 310 aaPredicted RBP0.42□□□□□ -2.34
CCDC93-205ENST00000466171 SDC2P34741 201 aa0.42□□□□□ -2.34
CCDC93-205ENST00000466171 NDUFA6P56556 154 aa0.42□□□□□ -2.34
CCDC93-205ENST00000466171 MIR22HGQ0VDD5 57 aa0.42□□□□□ -2.34
CCDC93-205ENST00000466171 NEDD8Q15843 81 aa0.42□□□□□ -2.34
CCDC93-205ENST00000466171 TMEM78Q5T7P6 136 aa0.42□□□□□ -2.34
CCDC93-205ENST00000466171 LINC00575Q6W349 94 aa0.42□□□□□ -2.34
CCDC93-205ENST00000466171 CASC2Q6XLA1 102 aa0.42□□□□□ -2.34
CCDC93-205ENST00000466171 FOXI2Q6ZQN5 318 aa0.42□□□□□ -2.34
CCDC93-205ENST00000466171 ZCCHC23Q6ZST2 131 aa0.42□□□□□ -2.34
CCDC93-205ENST00000466171 PHF5AQ7RTV0 110 aaKnown RBP0.42□□□□□ -2.34
CCDC93-205ENST00000466171 SBSPONQ8IVN8 264 aa0.42□□□□□ -2.34
CCDC93-205ENST00000466171 OR4B1Q8NGF8 309 aa0.42□□□□□ -2.34
CCDC93-205ENST00000466171 OR5AK2Q8NH90 309 aa0.42□□□□□ -2.34
CCDC93-205ENST00000466171 CLEC2BQ92478 149 aa0.42□□□□□ -2.34
CCDC93-205ENST00000466171 ISOC1Q96CN7 298 aa0.42□□□□□ -2.34
CCDC93-205ENST00000466171 RMND5BQ96G75 393 aaPredicted RBP0.42□□□□□ -2.34
CCDC93-205ENST00000466171 PRELID3AQ96N28 172 aa0.42□□□□□ -2.34
CCDC93-205ENST00000466171 SELENOSQ9BQE4 189 aa0.42□□□□□ -2.34
CCDC93-205ENST00000466171 LRTM1Q9HBL6 345 aa0.42□□□□□ -2.34
CCDC93-205ENST00000466171 NIT2Q9NQR4 276 aa0.42□□□□□ -2.34
CCDC93-205ENST00000466171 ATPIF1Q9UII2 106 aa0.42□□□□□ -2.34
CCDC93-205ENST00000466171 ADGBQ8N7X0 1667 aa0.42□□□□□ -2.34
CCDC93-205ENST00000466171 MYH2Q9UKX2 1941 aa0.42□□□□□ -2.34
CCDC93-205ENST00000466171 KIAA1107Q9UPP5 1409 aa0.41□□□□□ -2.34
CCDC93-205ENST00000466171 PBRM1Q86U86 1689 aa0.41□□□□□ -2.34
CCDC93-205ENST00000466171 A0A1W2PRE2 83 aa0.41□□□□□ -2.34
CCDC93-205ENST00000466171 E7EQ34 232 aa0.41□□□□□ -2.34
CCDC93-205ENST00000466171 BCL2P10415 239 aa0.41□□□□□ -2.34
CCDC93-205ENST00000466171 RPL37AP61513 92 aaKnown RBP0.41□□□□□ -2.34
CCDC93-205ENST00000466171 MRPS36P82909 103 aaKnown RBP0.41□□□□□ -2.34
CCDC93-205ENST00000466171 OCIAD2Q56VL3 154 aa0.41□□□□□ -2.34
CCDC93-205ENST00000466171 GLIPR1L1Q6UWM5 242 aa0.41□□□□□ -2.34
CCDC93-205ENST00000466171 LINC00305Q7Z4B0 112 aa0.41□□□□□ -2.34
CCDC93-205ENST00000466171 Q86TA4 180 aa0.41□□□□□ -2.34
CCDC93-205ENST00000466171 OR10AC1Q8NH08 325 aa0.41□□□□□ -2.34
CCDC93-205ENST00000466171 MCEEQ96PE7 176 aa0.41□□□□□ -2.34
CCDC93-205ENST00000466171 HSPB8Q9UJY1 196 aa0.41□□□□□ -2.34
CCDC93-205ENST00000466171 TRAPPC2LQ9UL33 140 aa0.41□□□□□ -2.34
CCDC93-205ENST00000466171 BOKQ9UMX3 212 aaPredicted RBP0.41□□□□□ -2.34
CCDC93-205ENST00000466171 LAMTOR2Q9Y2Q5 125 aa0.41□□□□□ -2.34
CCDC93-205ENST00000466171 ZNF469Q96JG9 3925 aaPredicted RBP0.41□□□□□ -2.34
CCDC93-205ENST00000466171 MYH3P11055 1940 aa0.4□□□□□ -2.34
CCDC93-205ENST00000466171 DLC1Q96QB1 1528 aa0.4□□□□□ -2.35
CCDC93-205ENST00000466171 LOC107984156A0A0G2JMH3 177 aa0.4□□□□□ -2.35
CCDC93-205ENST00000466171 PGRMC1O00264 195 aaKnown RBP0.4□□□□□ -2.35
CCDC93-205ENST00000466171 IFNA21P01568 189 aa0.4□□□□□ -2.35
CCDC93-205ENST00000466171 TRACP01848 142 aa0.4□□□□□ -2.35
CCDC93-205ENST00000466171 TPT1P13693 172 aaKnown RBP0.4□□□□□ -2.35
CCDC93-205ENST00000466171 FXYD4P59646 89 aa0.4□□□□□ -2.35
CCDC93-205ENST00000466171 MAXP61244 160 aa0.4□□□□□ -2.35
CCDC93-205ENST00000466171 LINC00299Q6ZSB3 139 aa0.4□□□□□ -2.35
CCDC93-205ENST00000466171 SMIM15Q7Z3B0 74 aa0.4□□□□□ -2.35
CCDC93-205ENST00000466171 ARL17AQ8IVW1 177 aa0.4□□□□□ -2.35
CCDC93-205ENST00000466171 LINC00269Q8N2A0 174 aa0.4□□□□□ -2.35
CCDC93-205ENST00000466171 DIRC1Q969H9 104 aa0.4□□□□□ -2.35
CCDC93-205ENST00000466171 AP1S3Q96PC3 154 aa0.4□□□□□ -2.35
CCDC93-205ENST00000466171 FKBP11Q9NYL4 201 aa0.4□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 85.5 ms