RNA–Protein interactions for RNA: ENST00000464938.1

NUCKS1-202, Transcript of nuclear casein kinase and cyclin dependent kinase substrate 1, humanhuman

TSL 2

Gene NUCKS1, Length 228 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1-202ENST00000464938 TECPR2O15040 1411 aa0.2□□□□□ -2.38
NUCKS1-202ENST00000464938 TRAPPC8Q9Y2L5 1435 aa0.2□□□□□ -2.38
NUCKS1-202ENST00000464938 CITO14578 2027 aa0.2□□□□□ -2.38
NUCKS1-202ENST00000464938 SNRNP200O75643 2136 aaKnown RBP0.19□□□□□ -2.38
NUCKS1-202ENST00000464938 MYO5AQ9Y4I1 1855 aaKnown RBP0.19□□□□□ -2.38
NUCKS1-202ENST00000464938 A6NN06 94 aa0.19□□□□□ -2.38
NUCKS1-202ENST00000464938 PRH1P02810 166 aa0.19□□□□□ -2.38
NUCKS1-202ENST00000464938 RPL35P42766 123 aaKnown RBP0.19□□□□□ -2.38
NUCKS1-202ENST00000464938 TAS2R41P59536 307 aa0.19□□□□□ -2.38
NUCKS1-202ENST00000464938 BASP1P80723 227 aaKnown RBP0.19□□□□□ -2.38
NUCKS1-202ENST00000464938 CIRBPQ14011 172 aaKnown RBP0.19□□□□□ -2.38
NUCKS1-202ENST00000464938 RTL8BQ17RB0 113 aa0.19□□□□□ -2.38
NUCKS1-202ENST00000464938 SPATA45Q537H7 98 aa0.19□□□□□ -2.38
NUCKS1-202ENST00000464938 FOXI2Q6ZQN5 318 aa0.19□□□□□ -2.38
NUCKS1-202ENST00000464938 LINC00299Q6ZSB3 139 aa0.19□□□□□ -2.38
NUCKS1-202ENST00000464938 ZCCHC23Q6ZST2 131 aa0.19□□□□□ -2.38
NUCKS1-202ENST00000464938 ATOH7Q8N100 152 aa0.19□□□□□ -2.38
NUCKS1-202ENST00000464938 OR10AC1Q8NH08 325 aa0.19□□□□□ -2.38
NUCKS1-202ENST00000464938 DIRC1Q969H9 104 aa0.19□□□□□ -2.38
NUCKS1-202ENST00000464938 LRTM1Q9HBL6 345 aa0.19□□□□□ -2.38
NUCKS1-202ENST00000464938 OTORQ9NRC9 128 aa0.19□□□□□ -2.38
NUCKS1-202ENST00000464938 MED12Q93074 2177 aa0.19□□□□□ -2.38
NUCKS1-202ENST00000464938 MUC4Q99102 2169 aa0.19□□□□□ -2.38
NUCKS1-202ENST00000464938 PTPRFP10586 1907 aa0.19□□□□□ -2.38
NUCKS1-202ENST00000464938 KCPQ6ZWJ8 1503 aa0.18□□□□□ -2.38
NUCKS1-202ENST00000464938 TCOF1Q13428 1488 aaKnown RBP0.18□□□□□ -2.38
NUCKS1-202ENST00000464938 A0A0J9YY99 117 aa0.18□□□□□ -2.38
NUCKS1-202ENST00000464938 TRDV1A0A1B0GX56 115 aa0.18□□□□□ -2.38
NUCKS1-202ENST00000464938 H7BYZ3 331 aa0.18□□□□□ -2.38
NUCKS1-202ENST00000464938 GPR31O00270 319 aa0.18□□□□□ -2.38
NUCKS1-202ENST00000464938 LYRM1O43325 122 aa0.18□□□□□ -2.38
NUCKS1-202ENST00000464938 CST7O76096 145 aa0.18□□□□□ -2.38
NUCKS1-202ENST00000464938 CD14P08571 375 aa0.18□□□□□ -2.38
NUCKS1-202ENST00000464938 KRTAP2-3P0C7H8 128 aa0.18□□□□□ -2.38
NUCKS1-202ENST00000464938 GLRXP35754 106 aa0.18□□□□□ -2.38
NUCKS1-202ENST00000464938 CRYBA4P53673 196 aa0.18□□□□□ -2.38
NUCKS1-202ENST00000464938 TCTAP57738 103 aa0.18□□□□□ -2.38
NUCKS1-202ENST00000464938 MIR22HGQ0VDD5 57 aa0.18□□□□□ -2.38
NUCKS1-202ENST00000464938 SPINK9Q5DT21 86 aa0.18□□□□□ -2.38
NUCKS1-202ENST00000464938 IFT20Q8IY31 132 aa0.18□□□□□ -2.38
NUCKS1-202ENST00000464938 KRTAP2-4Q9BYR9 128 aa0.18□□□□□ -2.38
NUCKS1-202ENST00000464938 KRTAP2-1Q9BYU5 128 aa0.18□□□□□ -2.38
NUCKS1-202ENST00000464938 WFDC10AQ9H1F0 79 aa0.18□□□□□ -2.38
NUCKS1-202ENST00000464938 TCEAL2Q9H3H9 227 aaPredicted RBP0.18□□□□□ -2.38
NUCKS1-202ENST00000464938 BIN3Q9NQY0 253 aa0.18□□□□□ -2.38
NUCKS1-202ENST00000464938 IL20Q9NYY1 176 aa0.18□□□□□ -2.38
NUCKS1-202ENST00000464938 MYH2Q9UKX2 1941 aa0.18□□□□□ -2.38
NUCKS1-202ENST00000464938 CTTNBP2Q8WZ74 1663 aa0.18□□□□□ -2.38
NUCKS1-202ENST00000464938 E5RI56 91 aa0.17□□□□□ -2.38
NUCKS1-202ENST00000464938 PPP5D1E7EU14 171 aa0.17□□□□□ -2.38
NUCKS1-202ENST00000464938 PDE6GP18545 87 aa0.17□□□□□ -2.38
NUCKS1-202ENST00000464938 SERPINB1P30740 379 aa0.17□□□□□ -2.38
NUCKS1-202ENST00000464938 PPP1R2P41236 205 aa0.17□□□□□ -2.38
NUCKS1-202ENST00000464938 TMEM78Q5T7P6 136 aa0.17□□□□□ -2.38
NUCKS1-202ENST00000464938 STX19Q8N4C7 294 aa0.17□□□□□ -2.38
NUCKS1-202ENST00000464938 BORCS8Q96FH0 119 aa0.17□□□□□ -2.38
NUCKS1-202ENST00000464938 MCEEQ96PE7 176 aa0.17□□□□□ -2.38
NUCKS1-202ENST00000464938 SMR3AQ99954 134 aa0.17□□□□□ -2.38
NUCKS1-202ENST00000464938 LIMD2Q9BT23 127 aa0.17□□□□□ -2.38
NUCKS1-202ENST00000464938 CST11Q9H112 138 aa0.17□□□□□ -2.38
NUCKS1-202ENST00000464938 LAMTOR3Q9UHA4 124 aa0.17□□□□□ -2.38
NUCKS1-202ENST00000464938 NUBP2Q9Y5Y2 271 aa0.17□□□□□ -2.38
NUCKS1-202ENST00000464938 USP54Q70EL1 1684 aa0.17□□□□□ -2.38
NUCKS1-202ENST00000464938 NAV3Q8IVL0 2385 aa0.16□□□□□ -2.38
NUCKS1-202ENST00000464938 H3BQV1 296 aa0.16□□□□□ -2.38
NUCKS1-202ENST00000464938 KPNA4O00629 521 aaPredicted RBP0.16□□□□□ -2.38
NUCKS1-202ENST00000464938 IGHV3-30P01768 117 aa0.16□□□□□ -2.38
NUCKS1-202ENST00000464938 IGHV3-30-5P0DP03 117 aa0.16□□□□□ -2.38
NUCKS1-202ENST00000464938 CCL4P13236 92 aa0.16□□□□□ -2.38
NUCKS1-202ENST00000464938 FABP4P15090 132 aa0.16□□□□□ -2.38
NUCKS1-202ENST00000464938 RPL37AP61513 92 aaKnown RBP0.16□□□□□ -2.38
NUCKS1-202ENST00000464938 PPP1R2P3Q6NXS1 205 aa0.16□□□□□ -2.38
NUCKS1-202ENST00000464938 C3orf33Q6P1S2 294 aa0.16□□□□□ -2.38
NUCKS1-202ENST00000464938 NEK7Q8TDX7 302 aa0.16□□□□□ -2.38
NUCKS1-202ENST00000464938 OR4C12Q96R67 309 aa0.16□□□□□ -2.38
NUCKS1-202ENST00000464938 GID8Q9NWU2 228 aa0.16□□□□□ -2.38
NUCKS1-202ENST00000464938 PLAC8Q9NZF1 115 aa0.16□□□□□ -2.38
NUCKS1-202ENST00000464938 SMPXQ9UHP9 88 aa0.16□□□□□ -2.38
NUCKS1-202ENST00000464938 FANCMQ8IYD8 2048 aa0.16□□□□□ -2.38
NUCKS1-202ENST00000464938 WDR97A6NE52 1622 aa0.16□□□□□ -2.38
NUCKS1-202ENST00000464938 ANKRD31Q8N7Z5 1873 aa0.16□□□□□ -2.38
NUCKS1-202ENST00000464938 ZFC3H1O60293 1989 aaKnown RBP0.15□□□□□ -2.38
NUCKS1-202ENST00000464938 MYH3P11055 1940 aa0.15□□□□□ -2.39
NUCKS1-202ENST00000464938 CHD3Q12873 2000 aaKnown RBP0.15□□□□□ -2.39
NUCKS1-202ENST00000464938 ZDBF2Q9HCK1 2354 aa0.15□□□□□ -2.39
NUCKS1-202ENST00000464938 TRAV23DV6A0A075B6W5 121 aa0.15□□□□□ -2.39
NUCKS1-202ENST00000464938 TRBV30A0A0K0K1B3 111 aa0.15□□□□□ -2.39
NUCKS1-202ENST00000464938 GABARAPH6UMI1 98 aa0.15□□□□□ -2.39
NUCKS1-202ENST00000464938 GNG10P50151 68 aa0.15□□□□□ -2.39
NUCKS1-202ENST00000464938 FXYD4P59646 89 aa0.15□□□□□ -2.39
NUCKS1-202ENST00000464938 MRPS36P82909 103 aaKnown RBP0.15□□□□□ -2.39
NUCKS1-202ENST00000464938 DIAPH2-AS1Q14236 149 aa0.15□□□□□ -2.39
NUCKS1-202ENST00000464938 OCIAD2Q56VL3 154 aa0.15□□□□□ -2.39
NUCKS1-202ENST00000464938 C10orf99Q6UWK7 81 aa0.15□□□□□ -2.39
NUCKS1-202ENST00000464938 ZGRF1Q86YA3 2104 aa0.15□□□□□ -2.39
NUCKS1-202ENST00000464938 C10orf111Q8N326 155 aa0.15□□□□□ -2.39
NUCKS1-202ENST00000464938 FAM24BQ8N5W8 94 aa0.15□□□□□ -2.39
NUCKS1-202ENST00000464938 ISOC1Q96CN7 298 aa0.15□□□□□ -2.39
NUCKS1-202ENST00000464938 EFCAB11Q9BUY7 163 aa0.15□□□□□ -2.39
NUCKS1-202ENST00000464938 NAT8BQ9UHF3 227 aa0.15□□□□□ -2.39
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms