RNA–Protein interactions for RNA: ENST00000464187.1

COL5A1-205, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 1,830 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-205ENST00000464187 PRSS22Q9GZN4 317 aa11.23□□□□□ -0.61
COL5A1-205ENST00000464187 RPP21Q9H633 154 aaKnown RBP11.23□□□□□ -0.61
COL5A1-205ENST00000464187 MTORP42345 2549 aa11.23□□□□□ -0.61
COL5A1-205ENST00000464187 TRBV6-1A0A0K0K1D8 114 aa11.23□□□□□ -0.61
COL5A1-205ENST00000464187 DNAJC9-AS1A6NH13 148 aa11.23□□□□□ -0.61
COL5A1-205ENST00000464187 ESDP10768 282 aa11.23□□□□□ -0.61
COL5A1-205ENST00000464187 C15orf32Q32M92 178 aa11.23□□□□□ -0.61
COL5A1-205ENST00000464187 KIAA1644Q3SXP7 199 aa11.23□□□□□ -0.61
COL5A1-205ENST00000464187 RASL11AQ6T310 242 aa11.23□□□□□ -0.61
COL5A1-205ENST00000464187 LYPD1Q8N2G4 141 aa11.23□□□□□ -0.61
COL5A1-205ENST00000464187 GNB4Q9HAV0 340 aa11.23□□□□□ -0.61
COL5A1-205ENST00000464187 ZNF331Q9NQX6 463 aaPredicted RBP11.23□□□□□ -0.61
COL5A1-205ENST00000464187 HIGD1CA8MV81 97 aa11.22□□□□□ -0.61
COL5A1-205ENST00000464187 BMPR1BO00238 502 aa11.22□□□□□ -0.61
COL5A1-205ENST00000464187 CTSGP08311 255 aa11.22□□□□□ -0.61
COL5A1-205ENST00000464187 GDF5OSQ5U4N7 250 aa11.22□□□□□ -0.61
COL5A1-205ENST00000464187 S100A7AQ86SG5 101 aa11.22□□□□□ -0.61
COL5A1-205ENST00000464187 PRNTQ86SH4 94 aa11.22□□□□□ -0.61
COL5A1-205ENST00000464187 TXN2Q99757 166 aa11.22□□□□□ -0.61
COL5A1-205ENST00000464187 ZNF580Q9UK33 172 aa11.22□□□□□ -0.61
COL5A1-205ENST00000464187 CT83Q5H943 113 aa11.21□□□□□ -0.61
COL5A1-205ENST00000464187 BAGE3Q86Y29 109 aa11.21□□□□□ -0.61
COL5A1-205ENST00000464187 TMEM75Q8N9X5 138 aa11.21□□□□□ -0.61
COL5A1-205ENST00000464187 VN1R17PQ8TDU5 208 aa11.21□□□□□ -0.61
COL5A1-205ENST00000464187 ZNF702PQ9H963 129 aa11.21□□□□□ -0.61
COL5A1-205ENST00000464187 ESM1Q9NQ30 184 aa11.21□□□□□ -0.61
COL5A1-205ENST00000464187 HIVEP1P15822 2718 aa11.21□□□□□ -0.61
COL5A1-205ENST00000464187 P01737 135 aa11.21□□□□□ -0.62
COL5A1-205ENST00000464187 APCSP02743 223 aa11.21□□□□□ -0.62
COL5A1-205ENST00000464187 SLAQ13239 276 aa11.21□□□□□ -0.62
COL5A1-205ENST00000464187 PDE6HQ13956 83 aa11.21□□□□□ -0.62
COL5A1-205ENST00000464187 TCF24Q7RTU0 167 aa11.21□□□□□ -0.62
COL5A1-205ENST00000464187 ZNF502Q8TBZ5 544 aa11.21□□□□□ -0.62
COL5A1-205ENST00000464187 A0A1B0GXF2 115 aa11.2□□□□□ -0.62
COL5A1-205ENST00000464187 NPIPB6E9PJ23 425 aa11.2□□□□□ -0.62
COL5A1-205ENST00000464187 SCGB2A1O75556 95 aa11.2□□□□□ -0.62
COL5A1-205ENST00000464187 PRB4P10163 310 aaPredicted RBP11.2□□□□□ -0.62
COL5A1-205ENST00000464187 SRIP30626 198 aa11.2□□□□□ -0.62
COL5A1-205ENST00000464187 TPPP2P59282 170 aa11.2□□□□□ -0.62
COL5A1-205ENST00000464187 CFHR3Q02985 330 aa11.2□□□□□ -0.62
COL5A1-205ENST00000464187 OR10J3Q5JRS4 329 aa11.2□□□□□ -0.62
COL5A1-205ENST00000464187 FAM181BA6NEQ2 426 aa11.19□□□□□ -0.62
COL5A1-205ENST00000464187 A8MWL6 223 aa11.19□□□□□ -0.62
COL5A1-205ENST00000464187 DIRC3C9JPN6 131 aa11.19□□□□□ -0.62
COL5A1-205ENST00000464187 H3BUA1 57 aa11.19□□□□□ -0.62
COL5A1-205ENST00000464187 M0R3E3 92 aa11.19□□□□□ -0.62
COL5A1-205ENST00000464187 TRGV3P03979 118 aa11.19□□□□□ -0.62
COL5A1-205ENST00000464187 GPR183P32249 361 aa11.19□□□□□ -0.62
COL5A1-205ENST00000464187 PKIAP61925 76 aa11.19□□□□□ -0.62
COL5A1-205ENST00000464187 ATP5L2Q7Z4Y8 100 aa11.19□□□□□ -0.62
COL5A1-205ENST00000464187 GTSF1Q8WW33 167 aa11.19□□□□□ -0.62
COL5A1-205ENST00000464187 ZNF785A8K8V0 405 aa11.19□□□□□ -0.62
COL5A1-205ENST00000464187 INAFM1C9JVW0 142 aa11.19□□□□□ -0.62
COL5A1-205ENST00000464187 BRI3O95415 125 aa11.19□□□□□ -0.62
COL5A1-205ENST00000464187 IGLV1-40P01703 118 aa11.19□□□□□ -0.62
COL5A1-205ENST00000464187 PAFAH1B2P68402 229 aa11.19□□□□□ -0.62
COL5A1-205ENST00000464187 PSG3Q16557 428 aa11.19□□□□□ -0.62
COL5A1-205ENST00000464187 C16orf54Q6UWD8 224 aa11.19□□□□□ -0.62
COL5A1-205ENST00000464187 Q8N2B8 174 aa11.19□□□□□ -0.62
COL5A1-205ENST00000464187 ZNF418Q8TF45 676 aaPredicted RBP11.19□□□□□ -0.62
COL5A1-205ENST00000464187 DAZAP1Q96EP5 407 aaKnown RBP11.19□□□□□ -0.62
COL5A1-205ENST00000464187 ZC2HC1AQ96GY0 325 aa11.19□□□□□ -0.62
COL5A1-205ENST00000464187 ASCL2Q99929 193 aa11.19□□□□□ -0.62
COL5A1-205ENST00000464187 KLK15Q9H2R5 256 aa11.19□□□□□ -0.62
COL5A1-205ENST00000464187 PRO1933Q9H354 126 aa11.19□□□□□ -0.62
COL5A1-205ENST00000464187 RABAC1Q9UI14 185 aa11.19□□□□□ -0.62
COL5A1-205ENST00000464187 PSG8Q9UQ74 426 aa11.19□□□□□ -0.62
COL5A1-205ENST00000464187 FAM223BA6NKX1 122 aa11.18□□□□□ -0.62
COL5A1-205ENST00000464187 PF4V1P10720 104 aa11.18□□□□□ -0.62
COL5A1-205ENST00000464187 ATP5G2Q06055 141 aa11.18□□□□□ -0.62
COL5A1-205ENST00000464187 Q6ZWC4 215 aa11.18□□□□□ -0.62
COL5A1-205ENST00000464187 FAM223AQ8IWN6 122 aa11.18□□□□□ -0.62
COL5A1-205ENST00000464187 EEF1AKMT3Q96AZ1 226 aa11.18□□□□□ -0.62
COL5A1-205ENST00000464187 RCHY1Q96PM5 261 aa11.18□□□□□ -0.62
COL5A1-205ENST00000464187 GFRA4Q9GZZ7 299 aa11.18□□□□□ -0.62
COL5A1-205ENST00000464187 SETXQ7Z333 2677 aaKnown RBP11.17□□□□□ -0.62
COL5A1-205ENST00000464187 IGHV3-35A0A0C4DH35 117 aa11.17□□□□□ -0.62
COL5A1-205ENST00000464187 K7EQM0 130 aa11.17□□□□□ -0.62
COL5A1-205ENST00000464187 RPL7P18124 248 aaKnown RBP11.17□□□□□ -0.62
COL5A1-205ENST00000464187 IQCJQ1A5X6 159 aa11.17□□□□□ -0.62
COL5A1-205ENST00000464187 OR4B1Q8NGF8 309 aa11.17□□□□□ -0.62
COL5A1-205ENST00000464187 CCDC140Q96MF4 163 aa11.17□□□□□ -0.62
COL5A1-205ENST00000464187 AAMDCQ9H7C9 122 aa11.17□□□□□ -0.62
COL5A1-205ENST00000464187 ZFAND3Q9H8U3 227 aa11.17□□□□□ -0.62
COL5A1-205ENST00000464187 ZFP30Q9Y2G7 519 aa11.17□□□□□ -0.62
COL5A1-205ENST00000464187 IGHV3OR16-8A0A075B7F1 116 aa11.16□□□□□ -0.62
COL5A1-205ENST00000464187 TRBV7-1A0A0A6YYK4 115 aa11.16□□□□□ -0.62
COL5A1-205ENST00000464187 TSTD3H0UI37 97 aa11.16□□□□□ -0.62
COL5A1-205ENST00000464187 IGHG4P01861 327 aa11.16□□□□□ -0.62
COL5A1-205ENST00000464187 CLEC3BP05452 202 aa11.16□□□□□ -0.62
COL5A1-205ENST00000464187 CAMPP49913 170 aa11.16□□□□□ -0.62
COL5A1-205ENST00000464187 RAB9AP51151 201 aa11.16□□□□□ -0.62
COL5A1-205ENST00000464187 HILS1P60008 231 aa11.16□□□□□ -0.62
COL5A1-205ENST00000464187 C10orf99Q6UWK7 81 aa11.16□□□□□ -0.62
COL5A1-205ENST00000464187 TOMM20LQ6UXN7 152 aa11.16□□□□□ -0.62
COL5A1-205ENST00000464187 LCNL1Q6ZST4 164 aa11.16□□□□□ -0.62
COL5A1-205ENST00000464187 KCNS1Q96KK3 526 aa11.16□□□□□ -0.62
COL5A1-205ENST00000464187 PGLYRP4Q96LB8 373 aa11.16□□□□□ -0.62
COL5A1-205ENST00000464187 SSBP4Q9BWG4 385 aaPredicted RBP11.16□□□□□ -0.62
COL5A1-205ENST00000464187 SMAD5-AS1Q9Y6J3 95 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms