RNA–Protein interactions for RNA: ENST00000464001.1

ITGB1-208, Transcript of integrin subunit beta 1, humanhuman

TSL 2

Gene ITGB1, Length 316 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-208ENST00000464001 FAM215AQ9Y5M1 114 aa2.2□□□□□ -2.06
ITGB1-208ENST00000464001 ZFYVE16Q7Z3T8 1539 aa2.2□□□□□ -2.06
ITGB1-208ENST00000464001 EML5Q05BV3 1969 aa2.19□□□□□ -2.06
ITGB1-208ENST00000464001 WNK3Q9BYP7 1800 aa2.19□□□□□ -2.06
ITGB1-208ENST00000464001 ZNF609O15014 1411 aa2.19□□□□□ -2.06
ITGB1-208ENST00000464001 RIC1Q4ADV7 1423 aa2.19□□□□□ -2.06
ITGB1-208ENST00000464001 MICAL3Q7RTP6 2002 aa2.19□□□□□ -2.06
ITGB1-208ENST00000464001 TRAV3A0A0B4J244 114 aa2.19□□□□□ -2.06
ITGB1-208ENST00000464001 C7orf71A4D174 169 aa2.19□□□□□ -2.06
ITGB1-208ENST00000464001 BBIP1A8MTZ0 92 aa2.19□□□□□ -2.06
ITGB1-208ENST00000464001 H7C2G1 150 aa2.19□□□□□ -2.06
ITGB1-208ENST00000464001 CCL25O15444 150 aa2.19□□□□□ -2.06
ITGB1-208ENST00000464001 GNRH2O43555 120 aa2.19□□□□□ -2.06
ITGB1-208ENST00000464001 IGKV1-17P01599 117 aa2.19□□□□□ -2.06
ITGB1-208ENST00000464001 ZNF14P17017 642 aaPredicted RBP2.19□□□□□ -2.06
ITGB1-208ENST00000464001 CLLU1Q5K131 121 aa2.19□□□□□ -2.06
ITGB1-208ENST00000464001 ZNF880Q6PDB4 577 aa2.19□□□□□ -2.06
ITGB1-208ENST00000464001 IZUMO2Q6UXV1 221 aa2.19□□□□□ -2.06
ITGB1-208ENST00000464001 DPPA3Q6W0C5 159 aa2.19□□□□□ -2.06
ITGB1-208ENST00000464001 TMEM136Q6ZRR5 245 aa2.19□□□□□ -2.06
ITGB1-208ENST00000464001 OR4B1Q8NGF8 309 aa2.19□□□□□ -2.06
ITGB1-208ENST00000464001 CIB3Q96Q77 187 aaPredicted RBP2.19□□□□□ -2.06
ITGB1-208ENST00000464001 OR8B2Q96RD0 313 aa2.19□□□□□ -2.06
ITGB1-208ENST00000464001 RETNLBQ9BQ08 111 aa2.19□□□□□ -2.06
ITGB1-208ENST00000464001 BCL2L10Q9HD36 194 aa2.19□□□□□ -2.06
ITGB1-208ENST00000464001 LSM2Q9Y333 95 aaKnown RBP2.19□□□□□ -2.06
ITGB1-208ENST00000464001 TIMM9Q9Y5J7 89 aa2.19□□□□□ -2.06
ITGB1-208ENST00000464001 DNAJC15Q9Y5T4 150 aa2.19□□□□□ -2.06
ITGB1-208ENST00000464001 ABCC10Q5T3U5 1492 aa2.19□□□□□ -2.06
ITGB1-208ENST00000464001 ADGRB1O14514 1584 aa2.19□□□□□ -2.06
ITGB1-208ENST00000464001 NAIPQ13075 1403 aa2.18□□□□□ -2.06
ITGB1-208ENST00000464001 MCM3APO60318 1980 aa2.18□□□□□ -2.06
ITGB1-208ENST00000464001 KIAA1551Q9HCM1 1747 aa2.18□□□□□ -2.06
ITGB1-208ENST00000464001 A0A0D9SG52 128 aa2.18□□□□□ -2.06
ITGB1-208ENST00000464001 TRBV10-2A0A0K0K1G8 114 aa2.18□□□□□ -2.06
ITGB1-208ENST00000464001 B4DSR2 109 aa2.18□□□□□ -2.06
ITGB1-208ENST00000464001 CD3DP04234 171 aa2.18□□□□□ -2.06
ITGB1-208ENST00000464001 ZNF705BP0CI00 300 aaPredicted RBP2.18□□□□□ -2.06
ITGB1-208ENST00000464001 NFYAP23511 347 aaPredicted RBP2.18□□□□□ -2.06
ITGB1-208ENST00000464001 ZNF93P35789 620 aaPredicted RBP2.18□□□□□ -2.06
ITGB1-208ENST00000464001 NCMAPQ5T1S8 102 aa2.18□□□□□ -2.06
ITGB1-208ENST00000464001 AAED1Q7RTV5 226 aa2.18□□□□□ -2.06
ITGB1-208ENST00000464001 Q8IYB0 196 aa2.18□□□□□ -2.06
ITGB1-208ENST00000464001 FAM216BQ8N7L0 139 aa2.18□□□□□ -2.06
ITGB1-208ENST00000464001 CHCHD1Q96BP2 118 aaKnown RBP2.18□□□□□ -2.06
ITGB1-208ENST00000464001 DPH3Q96FX2 82 aa2.18□□□□□ -2.06
ITGB1-208ENST00000464001 MCEEQ96PE7 176 aa2.18□□□□□ -2.06
ITGB1-208ENST00000464001 IGKV1D-42A0A075B6H8 117 aa2.17□□□□□ -2.06
ITGB1-208ENST00000464001 IGLV3-12A0A075B6K2 115 aa2.17□□□□□ -2.06
ITGB1-208ENST00000464001 SYNGR2O43760 224 aa2.17□□□□□ -2.06
ITGB1-208ENST00000464001 OR1I1O60431 355 aa2.17□□□□□ -2.06
ITGB1-208ENST00000464001 ZNF737O75373 536 aa2.17□□□□□ -2.06
ITGB1-208ENST00000464001 CD14P08571 375 aa2.17□□□□□ -2.06
ITGB1-208ENST00000464001 COX6A1P12074 109 aa2.17□□□□□ -2.06
ITGB1-208ENST00000464001 FABP4P15090 132 aa2.17□□□□□ -2.06
ITGB1-208ENST00000464001 FUSP35637 526 aaKnown RBP eCLIP2.17□□□□□ -2.06
ITGB1-208ENST00000464001 SS18Q15532 418 aa2.17□□□□□ -2.06
ITGB1-208ENST00000464001 NNATQ16517 81 aa2.17□□□□□ -2.06
ITGB1-208ENST00000464001 IGFL1Q6UW32 110 aa2.17□□□□□ -2.06
ITGB1-208ENST00000464001 Q6ZQT0 140 aa2.17□□□□□ -2.06
ITGB1-208ENST00000464001 Q6ZS52 159 aa2.17□□□□□ -2.06
ITGB1-208ENST00000464001 SLC35E3Q7Z769 313 aa2.17□□□□□ -2.06
ITGB1-208ENST00000464001 C8orf59Q8N0T1 100 aaPredicted RBP2.17□□□□□ -2.06
ITGB1-208ENST00000464001 CLEC2BQ92478 149 aa2.17□□□□□ -2.06
ITGB1-208ENST00000464001 POP5Q969H6 163 aaKnown RBP2.17□□□□□ -2.06
ITGB1-208ENST00000464001 CCDC167Q9P0B6 97 aa2.17□□□□□ -2.06
ITGB1-208ENST00000464001 HHLA3Q9XRX5 114 aa2.17□□□□□ -2.06
ITGB1-208ENST00000464001 A2ML1A8K2U0 1454 aa2.17□□□□□ -2.06
ITGB1-208ENST00000464001 PLA2R1Q13018 1463 aa2.17□□□□□ -2.06
ITGB1-208ENST00000464001 MGAMO43451 1857 aa2.17□□□□□ -2.06
ITGB1-208ENST00000464001 DOCK1Q14185 1865 aa2.17□□□□□ -2.06
ITGB1-208ENST00000464001 KIAA1107Q9UPP5 1409 aa2.17□□□□□ -2.06
ITGB1-208ENST00000464001 PLXNA2O75051 1894 aa2.16□□□□□ -2.06
ITGB1-208ENST00000464001 NRKQ7Z2Y5 1582 aa2.16□□□□□ -2.06
ITGB1-208ENST00000464001 TRAV30A0A087WSZ9 112 aa2.16□□□□□ -2.06
ITGB1-208ENST00000464001 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.16□□□□□ -2.06
ITGB1-208ENST00000464001 IGHV1-18A0A0C4DH31 117 aa2.16□□□□□ -2.06
ITGB1-208ENST00000464001 TMEM218A2RU14 115 aa2.16□□□□□ -2.06
ITGB1-208ENST00000464001 IFITM5A6NNB3 132 aa2.16□□□□□ -2.06
ITGB1-208ENST00000464001 FNDC10F2Z333 226 aa2.16□□□□□ -2.06
ITGB1-208ENST00000464001 RPL36A-HNRNPH2H7BZ11 118 aa2.16□□□□□ -2.06
ITGB1-208ENST00000464001 M0R143 59 aa2.16□□□□□ -2.06
ITGB1-208ENST00000464001 CDC42EP2O14613 210 aa2.16□□□□□ -2.06
ITGB1-208ENST00000464001 PITX3O75364 302 aa2.16□□□□□ -2.06
ITGB1-208ENST00000464001 IFNA17P01571 189 aa2.16□□□□□ -2.06
ITGB1-208ENST00000464001 IGLV1-51P01701 117 aa2.16□□□□□ -2.06
ITGB1-208ENST00000464001 CD2P06729 351 aa2.16□□□□□ -2.06
ITGB1-208ENST00000464001 CTSDP07339 412 aaPredicted RBP2.16□□□□□ -2.06
ITGB1-208ENST00000464001 PYYP10082 97 aa2.16□□□□□ -2.06
ITGB1-208ENST00000464001 SLC25A4P12235 298 aa2.16□□□□□ -2.06
ITGB1-208ENST00000464001 TPT1P13693 172 aaKnown RBP2.16□□□□□ -2.06
ITGB1-208ENST00000464001 HIST1H1BP16401 226 aaKnown RBP2.16□□□□□ -2.06
ITGB1-208ENST00000464001 FXYD2P54710 66 aa2.16□□□□□ -2.06
ITGB1-208ENST00000464001 PKIAP61925 76 aa2.16□□□□□ -2.06
ITGB1-208ENST00000464001 CCL4L1Q8NHW4 92 aa2.16□□□□□ -2.06
ITGB1-208ENST00000464001 MRPL57Q9BQC6 102 aaKnown RBP2.16□□□□□ -2.06
ITGB1-208ENST00000464001 SLC35B3Q9H1N7 401 aa2.16□□□□□ -2.06
ITGB1-208ENST00000464001 DUSP21Q9H596 190 aa2.16□□□□□ -2.06
ITGB1-208ENST00000464001 COL24A1Q17RW2 1714 aa2.16□□□□□ -2.06
ITGB1-208ENST00000464001 ANK1P16157 1881 aa2.16□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms