RNA–Protein interactions for RNA: ENST00000461608.1

HDAC6-212, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-212ENST00000461608 ROCK2O75116 1388 aaKnown RBP1.07□□□□□ -2.24
HDAC6-212ENST00000461608 FMN1Q68DA7 1419 aa1.06□□□□□ -2.24
HDAC6-212ENST00000461608 CNTLNQ9NXG0 1405 aa1.06□□□□□ -2.24
HDAC6-212ENST00000461608 TRAPPC8Q9Y2L5 1435 aa1.06□□□□□ -2.24
HDAC6-212ENST00000461608 MYO5CQ9NQX4 1742 aa1.06□□□□□ -2.24
HDAC6-212ENST00000461608 HEATR5AQ86XA9 2040 aa1.06□□□□□ -2.24
HDAC6-212ENST00000461608 CCDC88CQ9P219 2028 aa1.06□□□□□ -2.24
HDAC6-212ENST00000461608 NUMA1Q14980 2115 aa1.06□□□□□ -2.24
HDAC6-212ENST00000461608 KDM5CP41229 1560 aa1.06□□□□□ -2.24
HDAC6-212ENST00000461608 SAMD9Q5K651 1589 aa1.06□□□□□ -2.24
HDAC6-212ENST00000461608 TRAV3A0A0B4J244 114 aa1.06□□□□□ -2.24
HDAC6-212ENST00000461608 H3BMG7 143 aa1.06□□□□□ -2.24
HDAC6-212ENST00000461608 GGCTO75223 188 aaKnown RBP1.06□□□□□ -2.24
HDAC6-212ENST00000461608 CST7O76096 145 aa1.06□□□□□ -2.24
HDAC6-212ENST00000461608 DPM2O94777 84 aa1.06□□□□□ -2.24
HDAC6-212ENST00000461608 UBL3O95164 117 aa1.06□□□□□ -2.24
HDAC6-212ENST00000461608 IGF2P01344 180 aa1.06□□□□□ -2.24
HDAC6-212ENST00000461608 LINC00694P0DN24 101 aa1.06□□□□□ -2.24
HDAC6-212ENST00000461608 RNASE4P34096 147 aaKnown RBP1.06□□□□□ -2.24
HDAC6-212ENST00000461608 SDC2P34741 201 aa1.06□□□□□ -2.24
HDAC6-212ENST00000461608 DYNLT3P51808 116 aa1.06□□□□□ -2.24
HDAC6-212ENST00000461608 UBE2BP63146 152 aa1.06□□□□□ -2.24
HDAC6-212ENST00000461608 HBBP68871 147 aa1.06□□□□□ -2.24
HDAC6-212ENST00000461608 PSG9Q00887 426 aa1.06□□□□□ -2.24
HDAC6-212ENST00000461608 VMA21Q3ZAQ7 101 aa1.06□□□□□ -2.24
HDAC6-212ENST00000461608 GLYATL3Q5SZD4 288 aa1.06□□□□□ -2.24
HDAC6-212ENST00000461608 PRR15Q8IV56 129 aa1.06□□□□□ -2.24
HDAC6-212ENST00000461608 PDZD9Q8IXQ8 264 aa1.06□□□□□ -2.24
HDAC6-212ENST00000461608 OR51A4Q8NGJ6 313 aa1.06□□□□□ -2.24
HDAC6-212ENST00000461608 OR4K15Q8NH41 348 aa1.06□□□□□ -2.24
HDAC6-212ENST00000461608 C4orf3Q8WVX3 66 aa1.06□□□□□ -2.24
HDAC6-212ENST00000461608 ZNF714Q96N38 554 aa1.06□□□□□ -2.24
HDAC6-212ENST00000461608 C12orf57Q99622 126 aa1.06□□□□□ -2.24
HDAC6-212ENST00000461608 HIST1H2BLQ99880 126 aa1.06□□□□□ -2.24
HDAC6-212ENST00000461608 SLC50A1Q9BRV3 221 aa1.06□□□□□ -2.24
HDAC6-212ENST00000461608 LXNQ9BS40 222 aa1.06□□□□□ -2.24
HDAC6-212ENST00000461608 PRADC1Q9BSG0 188 aa1.06□□□□□ -2.24
HDAC6-212ENST00000461608 NPCDR1Q9BY65 106 aa1.06□□□□□ -2.24
HDAC6-212ENST00000461608 CBLN4Q9NTU7 201 aa1.06□□□□□ -2.24
HDAC6-212ENST00000461608 CALML5Q9NZT1 146 aa1.06□□□□□ -2.24
HDAC6-212ENST00000461608 ERG28Q9UKR5 140 aa1.06□□□□□ -2.24
HDAC6-212ENST00000461608 MYO3AQ8NEV4 1616 aa1.06□□□□□ -2.24
HDAC6-212ENST00000461608 OVOS2A0A0G2JMS6 1433 aa1.06□□□□□ -2.24
HDAC6-212ENST00000461608 SCAPERQ9BY12 1400 aa1.06□□□□□ -2.24
HDAC6-212ENST00000461608 TCOF1Q13428 1488 aaKnown RBP1.05□□□□□ -2.24
HDAC6-212ENST00000461608 ZNF518AQ6AHZ1 1483 aa1.05□□□□□ -2.24
HDAC6-212ENST00000461608 MLH3Q9UHC1 1453 aa1.05□□□□□ -2.24
HDAC6-212ENST00000461608 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP1.05□□□□□ -2.24
HDAC6-212ENST00000461608 DIP2CQ9Y2E4 1556 aa1.05□□□□□ -2.24
HDAC6-212ENST00000461608 CEP170BQ9Y4F5 1589 aaPredicted RBP1.05□□□□□ -2.24
HDAC6-212ENST00000461608 DEPDC5O75140 1603 aa1.05□□□□□ -2.24
HDAC6-212ENST00000461608 ABCA6Q8N139 1617 aa1.05□□□□□ -2.24
HDAC6-212ENST00000461608 RNF17Q9BXT8 1623 aaKnown RBP1.05□□□□□ -2.24
HDAC6-212ENST00000461608 ALKQ9UM73 1620 aa1.05□□□□□ -2.24
HDAC6-212ENST00000461608 CLTCQ00610 1675 aaKnown RBP1.05□□□□□ -2.24
HDAC6-212ENST00000461608 CUL9Q8IWT3 2517 aa1.05□□□□□ -2.24
HDAC6-212ENST00000461608 IGKV3-7A0A075B6H7 116 aa1.05□□□□□ -2.24
HDAC6-212ENST00000461608 A0A096LPI6 279 aa1.05□□□□□ -2.24
HDAC6-212ENST00000461608 TRGV10A0A0A0MS01 117 aa1.05□□□□□ -2.24
HDAC6-212ENST00000461608 TRAV13-1A0A0B4J241 112 aa1.05□□□□□ -2.24
HDAC6-212ENST00000461608 TRAV5A0A0B4J249 113 aa1.05□□□□□ -2.24
HDAC6-212ENST00000461608 TMEM212A6NML5 194 aa1.05□□□□□ -2.24
HDAC6-212ENST00000461608 MIF4GDA9UHW6 222 aaKnown RBP1.05□□□□□ -2.24
HDAC6-212ENST00000461608 FAM25AB3EWG3 89 aa1.05□□□□□ -2.24
HDAC6-212ENST00000461608 FAM25CB3EWG5 89 aa1.05□□□□□ -2.24
HDAC6-212ENST00000461608 FAM25GB3EWG6 89 aa1.05□□□□□ -2.24
HDAC6-212ENST00000461608 M0R129 80 aa1.05□□□□□ -2.24
HDAC6-212ENST00000461608 NDUFB3O43676 98 aa1.05□□□□□ -2.24
HDAC6-212ENST00000461608 MT-ND6P03923 174 aa1.05□□□□□ -2.24
HDAC6-212ENST00000461608 ASAH2BP0C7U1 165 aa1.05□□□□□ -2.24
HDAC6-212ENST00000461608 IGLC6P0CF74 106 aa1.05□□□□□ -2.24
HDAC6-212ENST00000461608 S100PP25815 95 aa1.05□□□□□ -2.24
HDAC6-212ENST00000461608 BRS3P32247 399 aa1.05□□□□□ -2.24
HDAC6-212ENST00000461608 FOXA3P55318 350 aaPredicted RBP1.05□□□□□ -2.24
HDAC6-212ENST00000461608 NDUFA6P56556 154 aa1.05□□□□□ -2.24
HDAC6-212ENST00000461608 MAXP61244 160 aa1.05□□□□□ -2.24
HDAC6-212ENST00000461608 RPS25P62851 125 aaKnown RBP1.05□□□□□ -2.24
HDAC6-212ENST00000461608 MORN2Q502X0 79 aa1.05□□□□□ -2.24
HDAC6-212ENST00000461608 C10orf55Q5SWW7 151 aa1.05□□□□□ -2.24
HDAC6-212ENST00000461608 EIF5AL1Q6IS14 154 aaKnown RBP1.05□□□□□ -2.24
HDAC6-212ENST00000461608 Q6ZSA8 131 aa1.05□□□□□ -2.24
HDAC6-212ENST00000461608 C3orf56Q8N813 242 aa1.05□□□□□ -2.24
HDAC6-212ENST00000461608 C10orf105Q8TEF2 133 aa1.05□□□□□ -2.24
HDAC6-212ENST00000461608 AQP3Q92482 292 aa1.05□□□□□ -2.24
HDAC6-212ENST00000461608 GGACTQ9BVM4 153 aa1.05□□□□□ -2.24
HDAC6-212ENST00000461608 TAF9BQ9HBM6 251 aa1.05□□□□□ -2.24
HDAC6-212ENST00000461608 SPANXCQ9NY87 97 aa1.05□□□□□ -2.24
HDAC6-212ENST00000461608 CEP152O94986 1710 aa1.05□□□□□ -2.24
HDAC6-212ENST00000461608 KIDINS220Q9ULH0 1771 aa1.05□□□□□ -2.24
HDAC6-212ENST00000461608 XIRP1Q702N8 1843 aaKnown RBP1.05□□□□□ -2.24
HDAC6-212ENST00000461608 OTOGLQ3ZCN5 2332 aa1.05□□□□□ -2.24
HDAC6-212ENST00000461608 MYH3P11055 1940 aa1.05□□□□□ -2.24
HDAC6-212ENST00000461608 A2ML1A8K2U0 1454 aa1.05□□□□□ -2.24
HDAC6-212ENST00000461608 PRXQ9BXM0 1461 aa1.05□□□□□ -2.24
HDAC6-212ENST00000461608 SHANK2Q9UPX8 1470 aa1.05□□□□□ -2.24
HDAC6-212ENST00000461608 PCDH15Q96QU1 1955 aa1.05□□□□□ -2.24
HDAC6-212ENST00000461608 COL4A1P02462 1669 aa1.04□□□□□ -2.24
HDAC6-212ENST00000461608 IQGAP1P46940 1657 aa1.04□□□□□ -2.24
HDAC6-212ENST00000461608 ADGBQ8N7X0 1667 aa1.04□□□□□ -2.24
HDAC6-212ENST00000461608 ITSN2Q9NZM3 1697 aa1.04□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms