RNA–Protein interactions for RNA: ENST00000461115.5

IFT88-204, Transcript of intraflagellar transport 88, humanhuman

TSL 2

Gene IFT88, Length 1,440 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-204ENST00000461115 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.34□□□□□ -1.07
IFT88-204ENST00000461115 LINC00322Q6ZN03 302 aaPredicted RBP8.34□□□□□ -1.07
IFT88-204ENST00000461115 GOLT1AQ6ZVE7 132 aa8.34□□□□□ -1.07
IFT88-204ENST00000461115 TSKUQ8WUA8 353 aa8.34□□□□□ -1.07
IFT88-204ENST00000461115 KLK15Q9H2R5 256 aa8.34□□□□□ -1.07
IFT88-204ENST00000461115 MAP1AP78559 2803 aaPredicted RBP8.34□□□□□ -1.07
IFT88-204ENST00000461115 CELSR1Q9NYQ6 3014 aa8.33□□□□□ -1.08
IFT88-204ENST00000461115 ZNF705GA8MUZ8 300 aaPredicted RBP8.33□□□□□ -1.08
IFT88-204ENST00000461115 LINC00518Q8N0U6 118 aa8.33□□□□□ -1.08
IFT88-204ENST00000461115 NHLRC2Q8NBF2 726 aa8.33□□□□□ -1.08
IFT88-204ENST00000461115 GLMPQ8WWB7 406 aa8.33□□□□□ -1.08
IFT88-204ENST00000461115 ZNF702PQ9H963 129 aa8.33□□□□□ -1.08
IFT88-204ENST00000461115 PPP1R14DQ9NXH3 145 aa8.33□□□□□ -1.08
IFT88-204ENST00000461115 PSG8Q9UQ74 426 aa8.33□□□□□ -1.08
IFT88-204ENST00000461115 TEX15Q9BXT5 2789 aa8.33□□□□□ -1.08
IFT88-204ENST00000461115 PDZD2O15018 2839 aa8.32□□□□□ -1.08
IFT88-204ENST00000461115 CSMD2Q7Z408 3487 aa8.32□□□□□ -1.08
IFT88-204ENST00000461115 TRAV8-1A0A0A6YYK1 113 aa8.32□□□□□ -1.08
IFT88-204ENST00000461115 IFITM10A6NMD0 228 aa8.32□□□□□ -1.08
IFT88-204ENST00000461115 K7EMT4 169 aa8.32□□□□□ -1.08
IFT88-204ENST00000461115 M0R3E3 92 aa8.32□□□□□ -1.08
IFT88-204ENST00000461115 CSN1S1P47710 185 aa8.32□□□□□ -1.08
IFT88-204ENST00000461115 WDR73Q6P4I2 378 aa8.32□□□□□ -1.08
IFT88-204ENST00000461115 ATP5L2Q7Z4Y8 100 aa8.32□□□□□ -1.08
IFT88-204ENST00000461115 GPHB5Q86YW7 130 aa8.32□□□□□ -1.08
IFT88-204ENST00000461115 WFDC11Q8NEX6 87 aa8.32□□□□□ -1.08
IFT88-204ENST00000461115 RPP21Q9H633 154 aaKnown RBP8.32□□□□□ -1.08
IFT88-204ENST00000461115 NAT8BQ9UHF3 227 aa8.32□□□□□ -1.08
IFT88-204ENST00000461115 TRAPPC1Q9Y5R8 145 aa8.32□□□□□ -1.08
IFT88-204ENST00000461115 A8MWL6 223 aa8.31□□□□□ -1.08
IFT88-204ENST00000461115 CHEK1O14757 476 aa8.31□□□□□ -1.08
IFT88-204ENST00000461115 TRBV12-3P01733 135 aa8.31□□□□□ -1.08
IFT88-204ENST00000461115 ELANEP08246 267 aa8.31□□□□□ -1.08
IFT88-204ENST00000461115 PF4V1P10720 104 aa8.31□□□□□ -1.08
IFT88-204ENST00000461115 NDUFA6P56556 154 aa8.31□□□□□ -1.08
IFT88-204ENST00000461115 KRTAP1-1Q07627 177 aa8.31□□□□□ -1.08
IFT88-204ENST00000461115 FOXE3Q13461 319 aa8.31□□□□□ -1.08
IFT88-204ENST00000461115 SAPCD1Q5SSQ6 148 aa8.31□□□□□ -1.08
IFT88-204ENST00000461115 TMEM136Q6ZRR5 245 aa8.31□□□□□ -1.08
IFT88-204ENST00000461115 HIST3H2BBQ8N257 126 aa8.31□□□□□ -1.08
IFT88-204ENST00000461115 OR4X2Q8NGF9 303 aa8.31□□□□□ -1.08
IFT88-204ENST00000461115 NPFFR1Q9GZQ6 430 aa8.31□□□□□ -1.08
IFT88-204ENST00000461115 TRAV8-2A0A0B4J237 113 aa8.3□□□□□ -1.08
IFT88-204ENST00000461115 IGHV3-35A0A0C4DH35 117 aa8.3□□□□□ -1.08
IFT88-204ENST00000461115 A0A1B0GXF2 115 aa8.3□□□□□ -1.08
IFT88-204ENST00000461115 APOHP02749 345 aaPredicted RBP8.3□□□□□ -1.08
IFT88-204ENST00000461115 SRSF2Q01130 221 aaKnown RBP8.3□□□□□ -1.08
IFT88-204ENST00000461115 CIARTQ8N365 385 aaPredicted RBP8.3□□□□□ -1.08
IFT88-204ENST00000461115 NUP35Q8NFH5 326 aa8.3□□□□□ -1.08
IFT88-204ENST00000461115 WFDC12Q8WWY7 111 aa8.3□□□□□ -1.08
IFT88-204ENST00000461115 ZC2HC1AQ96GY0 325 aa8.3□□□□□ -1.08
IFT88-204ENST00000461115 SGK494Q96LW2 274 aa8.3□□□□□ -1.08
IFT88-204ENST00000461115 NEU1Q99519 415 aa8.3□□□□□ -1.08
IFT88-204ENST00000461115 GNB4Q9HAV0 340 aa8.3□□□□□ -1.08
IFT88-204ENST00000461115 PEF1Q9UBV8 284 aaKnown RBP8.3□□□□□ -1.08
IFT88-204ENST00000461115 RPH3ALQ9UNE2 315 aa8.3□□□□□ -1.08
IFT88-204ENST00000461115 CCDC168Q8NDH2 2452 aa8.3□□□□□ -1.08
IFT88-204ENST00000461115 A0A1W2PS18 150 aa8.29□□□□□ -1.08
IFT88-204ENST00000461115 SOCS3O14543 225 aa8.29□□□□□ -1.08
IFT88-204ENST00000461115 P01737 135 aa8.29□□□□□ -1.08
IFT88-204ENST00000461115 HLA-DQA1P01909 254 aa8.29□□□□□ -1.08
IFT88-204ENST00000461115 CRIP1P50238 77 aa8.29□□□□□ -1.08
IFT88-204ENST00000461115 LCN12Q6JVE5 192 aa8.29□□□□□ -1.08
IFT88-204ENST00000461115 UNQ9165/PRO28630Q6UXU0 137 aa8.29□□□□□ -1.08
IFT88-204ENST00000461115 PRNTQ86SH4 94 aa8.29□□□□□ -1.08
IFT88-204ENST00000461115 PRR25Q96S07 402 aa8.29□□□□□ -1.08
IFT88-204ENST00000461115 TLN2Q9Y4G6 2542 aa8.29□□□□□ -1.08
IFT88-204ENST00000461115 MXRA5Q9NR99 2828 aa8.29□□□□□ -1.08
IFT88-204ENST00000461115 ZNF469Q96JG9 3925 aaPredicted RBP8.29□□□□□ -1.08
IFT88-204ENST00000461115 IGHV3OR16-8A0A075B7F1 116 aa8.29□□□□□ -1.08
IFT88-204ENST00000461115 HOXA3O43365 443 aaPredicted RBP8.29□□□□□ -1.08
IFT88-204ENST00000461115 CD5LO43866 347 aa8.29□□□□□ -1.08
IFT88-204ENST00000461115 CA1P00915 261 aaPredicted RBP8.29□□□□□ -1.08
IFT88-204ENST00000461115 FRMD6-AS1P0C7T7 363 aa8.29□□□□□ -1.08
IFT88-204ENST00000461115 SMIM6P0DI80 62 aa8.29□□□□□ -1.08
IFT88-204ENST00000461115 ESDP10768 282 aa8.29□□□□□ -1.08
IFT88-204ENST00000461115 CBLN1P23435 193 aa8.29□□□□□ -1.08
IFT88-204ENST00000461115 Q0VG73 95 aa8.29□□□□□ -1.08
IFT88-204ENST00000461115 TMEM95Q3KNT9 176 aa8.29□□□□□ -1.08
IFT88-204ENST00000461115 HIST2H2BCQ6DN03 193 aa8.29□□□□□ -1.08
IFT88-204ENST00000461115 GBGT1Q8N5D6 347 aa8.29□□□□□ -1.08
IFT88-204ENST00000461115 GATD1Q8NB37 220 aa8.29□□□□□ -1.08
IFT88-204ENST00000461115 GTSF1Q8WW33 167 aa8.29□□□□□ -1.08
IFT88-204ENST00000461115 DAZAP1Q96EP5 407 aaKnown RBP8.29□□□□□ -1.08
IFT88-204ENST00000461115 UBE2E2Q96LR5 201 aa8.29□□□□□ -1.08
IFT88-204ENST00000461115 MRPL18Q9H0U6 180 aaKnown RBP8.29□□□□□ -1.08
IFT88-204ENST00000461115 SERTAD4Q9NUC0 356 aa8.29□□□□□ -1.08
IFT88-204ENST00000461115 UNC79Q9P2D8 2635 aa8.28□□□□□ -1.08
IFT88-204ENST00000461115 IGHV7-4-1A0A0J9YVY3 117 aa8.28□□□□□ -1.08
IFT88-204ENST00000461115 XKRY2A2RUG3 117 aa8.28□□□□□ -1.08
IFT88-204ENST00000461115 HIGD1CA8MV81 97 aa8.28□□□□□ -1.08
IFT88-204ENST00000461115 A8MWP6 167 aa8.28□□□□□ -1.08
IFT88-204ENST00000461115 SNURFLB1AK76 121 aa8.28□□□□□ -1.08
IFT88-204ENST00000461115 SMAD7O15105 426 aaKnown RBP8.28□□□□□ -1.08
IFT88-204ENST00000461115 SLC35B1P78383 322 aa8.28□□□□□ -1.08
IFT88-204ENST00000461115 DNLZQ5SXM8 178 aa8.28□□□□□ -1.08
IFT88-204ENST00000461115 PRR27Q6MZM9 219 aa8.28□□□□□ -1.08
IFT88-204ENST00000461115 RBPMS2Q6ZRY4 209 aaKnown RBP8.28□□□□□ -1.08
IFT88-204ENST00000461115 C9orf47Q6ZRZ4 202 aa8.28□□□□□ -1.08
IFT88-204ENST00000461115 Q71RC1 249 aaPredicted RBP8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms