RNA–Protein interactions for RNA: ENST00000460810.1

CCDC58-202, Transcript of coiled-coil domain containing 58, humanhuman

TSL 2

Gene CCDC58, Length 573 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-202ENST00000460810 TPT1P13693 172 aaKnown RBP1.84□□□□□ -2.11
CCDC58-202ENST00000460810 DSCR4P56555 118 aaPredicted RBP1.84□□□□□ -2.11
CCDC58-202ENST00000460810 QRFPP83859 136 aa1.84□□□□□ -2.11
CCDC58-202ENST00000460810 CDK6Q00534 326 aa1.84□□□□□ -2.11
CCDC58-202ENST00000460810 CLECL1Q8IZS7 167 aa1.84□□□□□ -2.11
CCDC58-202ENST00000460810 RNASE11Q8TAA1 199 aaKnown RBP1.84□□□□□ -2.11
CCDC58-202ENST00000460810 TMEM254Q8TBM7 123 aa1.84□□□□□ -2.11
CCDC58-202ENST00000460810 SFT2D1Q8WV19 159 aa1.84□□□□□ -2.11
CCDC58-202ENST00000460810 OR4C12Q96R67 309 aa1.84□□□□□ -2.11
CCDC58-202ENST00000460810 LPAR5Q9H1C0 372 aa1.84□□□□□ -2.11
CCDC58-202ENST00000460810 TPRKBQ9Y3C4 175 aa1.84□□□□□ -2.11
CCDC58-202ENST00000460810 SDK2Q58EX2 2172 aa1.83□□□□□ -2.12
CCDC58-202ENST00000460810 CCDC160A6NGH7 325 aa1.83□□□□□ -2.12
CCDC58-202ENST00000460810 E7EUB6 86 aa1.83□□□□□ -2.12
CCDC58-202ENST00000460810 C5orf67F2Z3F1 127 aa1.83□□□□□ -2.12
CCDC58-202ENST00000460810 SLC25A4P12235 298 aa1.83□□□□□ -2.12
CCDC58-202ENST00000460810 DNAJB13P59910 316 aa1.83□□□□□ -2.12
CCDC58-202ENST00000460810 NUMA1Q14980 2115 aa1.83□□□□□ -2.12
CCDC58-202ENST00000460810 Q6ZRN7 208 aaPredicted RBP1.83□□□□□ -2.12
CCDC58-202ENST00000460810 FP248Q71RG6 208 aaPredicted RBP1.83□□□□□ -2.12
CCDC58-202ENST00000460810 MUCL1Q96DR8 90 aa1.83□□□□□ -2.12
CCDC58-202ENST00000460810 ERG28Q9UKR5 140 aa1.83□□□□□ -2.12
CCDC58-202ENST00000460810 CHCHD2Q9Y6H1 151 aaPredicted RBP1.83□□□□□ -2.12
CCDC58-202ENST00000460810 KDM5CP41229 1560 aa1.83□□□□□ -2.12
CCDC58-202ENST00000460810 HIVEP2P31629 2446 aa1.82□□□□□ -2.12
CCDC58-202ENST00000460810 COL1A1P02452 1464 aaPredicted RBP1.82□□□□□ -2.12
CCDC58-202ENST00000460810 MYH10P35580 1976 aa1.82□□□□□ -2.12
CCDC58-202ENST00000460810 TRAV16A0A0A6YYK6 109 aaPredicted RBP1.82□□□□□ -2.12
CCDC58-202ENST00000460810 A0A1B0GV90 55 aa1.82□□□□□ -2.12
CCDC58-202ENST00000460810 TCRBV4S1A1TA0A5B7 111 aa1.82□□□□□ -2.12
CCDC58-202ENST00000460810 SMIM24O75264 130 aa1.82□□□□□ -2.12
CCDC58-202ENST00000460810 TSPAN19P0C672 248 aa1.82□□□□□ -2.12
CCDC58-202ENST00000460810 BRS3P32247 399 aa1.82□□□□□ -2.12
CCDC58-202ENST00000460810 AKR1D1P51857 326 aa1.82□□□□□ -2.12
CCDC58-202ENST00000460810 SNRPD3P62318 126 aaKnown RBP1.82□□□□□ -2.12
CCDC58-202ENST00000460810 BLCAPP62952 87 aa1.82□□□□□ -2.12
CCDC58-202ENST00000460810 RPL13AP3Q6NVV1 102 aa1.82□□□□□ -2.12
CCDC58-202ENST00000460810 Q8TAT8 98 aa1.82□□□□□ -2.12
CCDC58-202ENST00000460810 PSMF1Q92530 271 aa1.82□□□□□ -2.12
CCDC58-202ENST00000460810 Q96M85 177 aa1.82□□□□□ -2.12
CCDC58-202ENST00000460810 NABP2Q9BQ15 211 aa1.82□□□□□ -2.12
CCDC58-202ENST00000460810 PRG4Q92954 1404 aaPredicted RBP1.82□□□□□ -2.12
CCDC58-202ENST00000460810 SMARCA2P51531 1590 aa1.81□□□□□ -2.12
CCDC58-202ENST00000460810 SCRIBQ14160 1630 aa1.81□□□□□ -2.12
CCDC58-202ENST00000460810 A0A087WSZ3 146 aa1.81□□□□□ -2.12
CCDC58-202ENST00000460810 TRAV27A0A087WT01 109 aa1.81□□□□□ -2.12
CCDC58-202ENST00000460810 TRAV14DV4A0A0A6YYC5 116 aa1.81□□□□□ -2.12
CCDC58-202ENST00000460810 TRAV10A0A0B4J240 114 aa1.81□□□□□ -2.12
CCDC58-202ENST00000460810 FAM236AA0A1B0GUQ0 79 aa1.81□□□□□ -2.12
CCDC58-202ENST00000460810 FAM236BA0A1B0GV22 79 aa1.81□□□□□ -2.12
CCDC58-202ENST00000460810 C9orf170A2RU37 121 aa1.81□□□□□ -2.12
CCDC58-202ENST00000460810 MIF4GDA9UHW6 222 aaKnown RBP1.81□□□□□ -2.12
CCDC58-202ENST00000460810 J3QRE1 110 aa1.81□□□□□ -2.12
CCDC58-202ENST00000460810 SULT1C4O75897 302 aa1.81□□□□□ -2.12
CCDC58-202ENST00000460810 CD2P06729 351 aa1.81□□□□□ -2.12
CCDC58-202ENST00000460810 SAA1P0DJI8 122 aaPredicted RBP1.81□□□□□ -2.12
CCDC58-202ENST00000460810 CCL4P13236 92 aa1.81□□□□□ -2.12
CCDC58-202ENST00000460810 NCS1P62166 190 aa1.81□□□□□ -2.12
CCDC58-202ENST00000460810 RPS25P62851 125 aaKnown RBP1.81□□□□□ -2.12
CCDC58-202ENST00000460810 C1orf137Q5JT78 98 aa1.81□□□□□ -2.12
CCDC58-202ENST00000460810 HAGHLQ6PII5 290 aaPredicted RBP1.81□□□□□ -2.12
CCDC58-202ENST00000460810 TMEM91Q6ZNR0 172 aa1.81□□□□□ -2.12
CCDC58-202ENST00000460810 ARPINQ7Z6K5 226 aa1.81□□□□□ -2.12
CCDC58-202ENST00000460810 OR4C6Q8NH72 309 aa1.81□□□□□ -2.12
CCDC58-202ENST00000460810 MAGOHBQ96A72 148 aaKnown RBP1.81□□□□□ -2.12
CCDC58-202ENST00000460810 TP53RKQ96S44 253 aa1.81□□□□□ -2.12
CCDC58-202ENST00000460810 COMMD3Q9UBI1 195 aa1.81□□□□□ -2.12
CCDC58-202ENST00000460810 VIRMAQ69YN4 1812 aaKnown RBP1.81□□□□□ -2.12
CCDC58-202ENST00000460810 DISP2A7MBM2 1401 aa1.81□□□□□ -2.12
CCDC58-202ENST00000460810 K7ERU9 68 aa1.8□□□□□ -2.12
CCDC58-202ENST00000460810 CD14P08571 375 aa1.8□□□□□ -2.12
CCDC58-202ENST00000460810 HLA-DRB4P13762 266 aa1.8□□□□□ -2.12
CCDC58-202ENST00000460810 ZNF833PQ6ZTB9 187 aa1.8□□□□□ -2.12
CCDC58-202ENST00000460810 COA5Q86WW8 74 aa1.8□□□□□ -2.12
CCDC58-202ENST00000460810 CTAGE3PQ8IX95 158 aa1.8□□□□□ -2.12
CCDC58-202ENST00000460810 LINC00269Q8N2A0 174 aa1.8□□□□□ -2.12
CCDC58-202ENST00000460810 FAM19A2Q8N3H0 131 aa1.8□□□□□ -2.12
CCDC58-202ENST00000460810 C1orf54Q8WWF1 131 aa1.8□□□□□ -2.12
CCDC58-202ENST00000460810 DNAJC15Q9Y5T4 150 aa1.8□□□□□ -2.12
CCDC58-202ENST00000460810 HLA-DRB4X5D2U9 266 aa1.8□□□□□ -2.12
CCDC58-202ENST00000460810 LOC107986453A0A1B0GWG9 222 aa1.79□□□□□ -2.12
CCDC58-202ENST00000460810 LINC00587B1AMM8 73 aa1.79□□□□□ -2.12
CCDC58-202ENST00000460810 J3QR89 54 aa1.79□□□□□ -2.12
CCDC58-202ENST00000460810 ERC2-IT1O76042 136 aa1.79□□□□□ -2.12
CCDC58-202ENST00000460810 TRACP01848 142 aa1.79□□□□□ -2.12
CCDC58-202ENST00000460810 CD3DP04234 171 aa1.79□□□□□ -2.12
CCDC58-202ENST00000460810 GPX1P07203 203 aa1.79□□□□□ -2.12
CCDC58-202ENST00000460810 RNASE3P12724 160 aaKnown RBP1.79□□□□□ -2.12
CCDC58-202ENST00000460810 CIRBPQ14011 172 aaKnown RBP1.79□□□□□ -2.12
CCDC58-202ENST00000460810 WHAMMP3Q1A5X7 153 aa1.79□□□□□ -2.12
CCDC58-202ENST00000460810 C10orf55Q5SWW7 151 aa1.79□□□□□ -2.12
CCDC58-202ENST00000460810 KRTAP26-1Q6PEX3 210 aa1.79□□□□□ -2.12
CCDC58-202ENST00000460810 TEN1Q86WV5 123 aa1.79□□□□□ -2.12
CCDC58-202ENST00000460810 MMGT1Q8N4V1 131 aa1.79□□□□□ -2.12
CCDC58-202ENST00000460810 NAA38Q9BRA0 125 aaKnown RBP1.79□□□□□ -2.12
CCDC58-202ENST00000460810 CST11Q9H112 138 aa1.79□□□□□ -2.12
CCDC58-202ENST00000460810 ARHGAP31Q2M1Z3 1444 aa1.79□□□□□ -2.12
CCDC58-202ENST00000460810 STRCP1A6NGW2 1772 aa1.79□□□□□ -2.12
CCDC58-202ENST00000460810 MGAMO43451 1857 aa1.79□□□□□ -2.12
CCDC58-202ENST00000460810 MPDZO75970 2070 aa1.79□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms