RNA–Protein interactions for RNA: ENST00000454830.6

CLK3-203, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 3,787 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-203ENST00000454830 MUC21A0A0G2JKD1 596 aa10.57□□□□□ -0.72
CLK3-203ENST00000454830 MUC21A0A140T8X8 626 aa10.57□□□□□ -0.72
CLK3-203ENST00000454830 FAM223BA6NKX1 122 aa10.57□□□□□ -0.72
CLK3-203ENST00000454830 MRPS12O15235 138 aaKnown RBP10.57□□□□□ -0.72
CLK3-203ENST00000454830 MUC21Q5SSG8 566 aa10.57□□□□□ -0.72
CLK3-203ENST00000454830 FAM223AQ8IWN6 122 aa10.57□□□□□ -0.72
CLK3-203ENST00000454830 MLST8Q9BVC4 326 aa10.57□□□□□ -0.72
CLK3-203ENST00000454830 TEX15Q9BXT5 2789 aa10.57□□□□□ -0.72
CLK3-203ENST00000454830 F2Z2F3 143 aa10.56□□□□□ -0.72
CLK3-203ENST00000454830 SERF1AO75920 110 aa10.56□□□□□ -0.72
CLK3-203ENST00000454830 SCGB1D1O95968 90 aa10.56□□□□□ -0.72
CLK3-203ENST00000454830 IGHG2P01859 326 aa10.56□□□□□ -0.72
CLK3-203ENST00000454830 OR4X2Q8NGF9 303 aa10.56□□□□□ -0.72
CLK3-203ENST00000454830 BEX4Q9NWD9 120 aaPredicted RBP10.56□□□□□ -0.72
CLK3-203ENST00000454830 BUB3O43684 328 aa10.56□□□□□ -0.72
CLK3-203ENST00000454830 NUPR1O60356 82 aa10.56□□□□□ -0.72
CLK3-203ENST00000454830 PMCHP20382 165 aa10.56□□□□□ -0.72
CLK3-203ENST00000454830 ZFAND3Q9H8U3 227 aa10.56□□□□□ -0.72
CLK3-203ENST00000454830 ZFP30Q9Y2G7 519 aa10.56□□□□□ -0.72
CLK3-203ENST00000454830 NTF3P20783 257 aa10.56□□□□□ -0.72
CLK3-203ENST00000454830 ERCC8Q13216 396 aa10.56□□□□□ -0.72
CLK3-203ENST00000454830 TMEM75Q8N9X5 138 aa10.56□□□□□ -0.72
CLK3-203ENST00000454830 VGLL1Q99990 258 aa10.56□□□□□ -0.72
CLK3-203ENST00000454830 NDFIP1Q9BT67 221 aa10.56□□□□□ -0.72
CLK3-203ENST00000454830 SMAD5-AS1Q9Y6J3 95 aa10.56□□□□□ -0.72
CLK3-203ENST00000454830 MTORP42345 2549 aa10.56□□□□□ -0.72
CLK3-203ENST00000454830 J3KRW8 73 aa10.55□□□□□ -0.72
CLK3-203ENST00000454830 IGLV2-11P01706 119 aa10.55□□□□□ -0.72
CLK3-203ENST00000454830 RAB9AP51151 201 aa10.55□□□□□ -0.72
CLK3-203ENST00000454830 COX19Q49B96 90 aa10.55□□□□□ -0.72
CLK3-203ENST00000454830 LCN12Q6JVE5 192 aa10.55□□□□□ -0.72
CLK3-203ENST00000454830 C16orf92Q96LL3 132 aa10.55□□□□□ -0.72
CLK3-203ENST00000454830 SLAQ13239 276 aa10.55□□□□□ -0.72
CLK3-203ENST00000454830 IL17RELQ6ZVW7 336 aa10.55□□□□□ -0.72
CLK3-203ENST00000454830 FOXA3P55318 350 aaPredicted RBP10.55□□□□□ -0.72
CLK3-203ENST00000454830 SMIM12Q96EX1 92 aa10.55□□□□□ -0.72
CLK3-203ENST00000454830 TIMM8BQ9Y5J9 83 aaPredicted RBP10.55□□□□□ -0.72
CLK3-203ENST00000454830 CD33P20138 364 aa10.54□□□□□ -0.72
CLK3-203ENST00000454830 UNQ9165/PRO28630Q6UXU0 137 aa10.54□□□□□ -0.72
CLK3-203ENST00000454830 BORCS7Q96B45 105 aa10.54□□□□□ -0.72
CLK3-203ENST00000454830 ORM1P02763 201 aa10.54□□□□□ -0.72
CLK3-203ENST00000454830 HBBP68871 147 aa10.54□□□□□ -0.72
CLK3-203ENST00000454830 IQCJQ1A5X6 159 aa10.54□□□□□ -0.72
CLK3-203ENST00000454830 RBPMS2Q6ZRY4 209 aaKnown RBP10.54□□□□□ -0.72
CLK3-203ENST00000454830 MBD6Q96DN6 1003 aa10.54□□□□□ -0.72
CLK3-203ENST00000454830 SORL1Q92673 2214 aa10.54□□□□□ -0.72
CLK3-203ENST00000454830 ZNF705DP0CH99 300 aaPredicted RBP10.54□□□□□ -0.72
CLK3-203ENST00000454830 ZNF705BP0CI00 300 aaPredicted RBP10.54□□□□□ -0.72
CLK3-203ENST00000454830 GTSF1Q8WW33 167 aa10.54□□□□□ -0.72
CLK3-203ENST00000454830 PRO1933Q9H354 126 aa10.54□□□□□ -0.72
CLK3-203ENST00000454830 ZNF492Q9P255 531 aa10.54□□□□□ -0.72
CLK3-203ENST00000454830 IGHV4-31P0DP07 118 aa10.53□□□□□ -0.72
CLK3-203ENST00000454830 S100A12P80511 92 aa10.53□□□□□ -0.72
CLK3-203ENST00000454830 FASNP49327 2511 aaKnown RBP10.53□□□□□ -0.72
CLK3-203ENST00000454830 TMEM189A5PLL7 270 aa10.53□□□□□ -0.72
CLK3-203ENST00000454830 IGF1P05019 195 aa10.53□□□□□ -0.72
CLK3-203ENST00000454830 SRD5A1P18405 259 aa10.53□□□□□ -0.72
CLK3-203ENST00000454830 AMTP48728 403 aa10.53□□□□□ -0.72
CLK3-203ENST00000454830 C10orf99Q6UWK7 81 aa10.53□□□□□ -0.72
CLK3-203ENST00000454830 A0A0G2JLM5 398 aa10.53□□□□□ -0.72
CLK3-203ENST00000454830 SERTM2A0A1B0GWG4 89 aa10.53□□□□□ -0.72
CLK3-203ENST00000454830 PRAC2D3DTV9 90 aa10.53□□□□□ -0.72
CLK3-203ENST00000454830 J3QLI3 93 aa10.53□□□□□ -0.72
CLK3-203ENST00000454830 KHDC1LQ5JSQ8 128 aa10.53□□□□□ -0.72
CLK3-203ENST00000454830 GSN-AS1Q9NRJ2 163 aa10.53□□□□□ -0.72
CLK3-203ENST00000454830 CLPSL1A2RUU4 121 aa10.52□□□□□ -0.72
CLK3-203ENST00000454830 C19orf71A6NCJ1 209 aa10.52□□□□□ -0.72
CLK3-203ENST00000454830 LOXL1Q08397 574 aaPredicted RBP10.52□□□□□ -0.72
CLK3-203ENST00000454830 COA6Q5JTJ3 125 aaKnown RBP10.52□□□□□ -0.72
CLK3-203ENST00000454830 WFDC3Q8IUB2 231 aa10.52□□□□□ -0.72
CLK3-203ENST00000454830 SIGLECL1Q8N7X8 197 aa10.52□□□□□ -0.72
CLK3-203ENST00000454830 USMG5Q96IX5 58 aa10.52□□□□□ -0.72
CLK3-203ENST00000454830 FLNAP21333 2647 aaKnown RBP10.52□□□□□ -0.72
CLK3-203ENST00000454830 SAPCD1Q5SSQ6 148 aa10.52□□□□□ -0.73
CLK3-203ENST00000454830 NPFFR1Q9GZQ6 430 aa10.52□□□□□ -0.73
CLK3-203ENST00000454830 RNASEKQ6P5S7 137 aaKnown RBP10.52□□□□□ -0.73
CLK3-203ENST00000454830 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.52□□□□□ -0.73
CLK3-203ENST00000454830 ZNF738Q8NE65 137 aa10.52□□□□□ -0.73
CLK3-203ENST00000454830 HOXA3O43365 443 aaPredicted RBP10.51□□□□□ -0.73
CLK3-203ENST00000454830 GDF5OSQ5U4N7 250 aa10.51□□□□□ -0.73
CLK3-203ENST00000454830 APCP25054 2843 aa10.51□□□□□ -0.73
CLK3-203ENST00000454830 SH2D1AO60880 128 aa10.51□□□□□ -0.73
CLK3-203ENST00000454830 PPIFP30405 207 aaKnown RBP10.51□□□□□ -0.73
CLK3-203ENST00000454830 C8orf86Q6ZUL3 223 aa10.51□□□□□ -0.73
CLK3-203ENST00000454830 OR4B1Q8NGF8 309 aa10.51□□□□□ -0.73
CLK3-203ENST00000454830 PRR25Q96S07 402 aa10.51□□□□□ -0.73
CLK3-203ENST00000454830 SLC50A1Q9BRV3 221 aa10.51□□□□□ -0.73
CLK3-203ENST00000454830 PRSS22Q9GZN4 317 aa10.51□□□□□ -0.73
CLK3-203ENST00000454830 KRTDAPP60985 99 aa10.51□□□□□ -0.73
CLK3-203ENST00000454830 TM4SF20Q53R12 229 aa10.51□□□□□ -0.73
CLK3-203ENST00000454830 FAM162BQ5T6X4 162 aa10.51□□□□□ -0.73
CLK3-203ENST00000454830 TMEM78Q5T7P6 136 aa10.51□□□□□ -0.73
CLK3-203ENST00000454830 FAM19A2Q8N3H0 131 aa10.51□□□□□ -0.73
CLK3-203ENST00000454830 ZFHX3Q15911 3703 aa10.51□□□□□ -0.73
CLK3-203ENST00000454830 TFPI2P48307 235 aa10.5□□□□□ -0.73
CLK3-203ENST00000454830 ITPR3Q14573 2671 aa10.5□□□□□ -0.73
CLK3-203ENST00000454830 HSBP1O75506 76 aa10.5□□□□□ -0.73
CLK3-203ENST00000454830 CSN3P07498 182 aa10.5□□□□□ -0.73
CLK3-203ENST00000454830 ARMS2P0C7Q2 107 aa10.5□□□□□ -0.73
CLK3-203ENST00000454830 WNK1Q9H4A3 2382 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms