RNA–Protein interactions for RNA: ENST00000454555.2

LINC00343-203, long intergenic non-protein coding RNA 343, humanhuman

TSL 2 BASIC

Gene LINC00343, Length 1,765 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00343-203ENST00000454555 SCRT2Q9NQ03 307 aa10.46□□□□□ -0.74
LINC00343-203ENST00000454555 CSMD1Q96PZ7 3565 aa10.46□□□□□ -0.74
LINC00343-203ENST00000454555 TRBV19A0A075B6N1 114 aa10.45□□□□□ -0.74
LINC00343-203ENST00000454555 IGHV1-3A0A0C4DH29 117 aa10.45□□□□□ -0.74
LINC00343-203ENST00000454555 CYSRT1A8MQ03 144 aa10.45□□□□□ -0.74
LINC00343-203ENST00000454555 H3BRN7 92 aa10.45□□□□□ -0.74
LINC00343-203ENST00000454555 I3L2K1 104 aa10.45□□□□□ -0.74
LINC00343-203ENST00000454555 ZFP36P26651 326 aaKnown RBP10.45□□□□□ -0.74
LINC00343-203ENST00000454555 ZNF493Q6ZR52 646 aa10.45□□□□□ -0.74
LINC00343-203ENST00000454555 OR10AG1Q8NH19 301 aa10.45□□□□□ -0.74
LINC00343-203ENST00000454555 AP5S1Q9NUS5 200 aa10.45□□□□□ -0.74
LINC00343-203ENST00000454555 AKAP9Q99996 3911 aa10.45□□□□□ -0.74
LINC00343-203ENST00000454555 BUB1B-PAK6H3BSN5 160 aa10.44□□□□□ -0.74
LINC00343-203ENST00000454555 TOX4O94842 621 aa10.44□□□□□ -0.74
LINC00343-203ENST00000454555 GOLT1AQ6ZVE7 132 aa10.44□□□□□ -0.74
LINC00343-203ENST00000454555 DEFB125Q8N687 156 aa10.44□□□□□ -0.74
LINC00343-203ENST00000454555 KIR3DL3Q8N743 410 aa10.44□□□□□ -0.74
LINC00343-203ENST00000454555 LY6G5BQ8NDX9 201 aa10.44□□□□□ -0.74
LINC00343-203ENST00000454555 SRSF12Q8WXF0 261 aaKnown RBP10.44□□□□□ -0.74
LINC00343-203ENST00000454555 LOC105371242A0A075B767 164 aa10.44□□□□□ -0.74
LINC00343-203ENST00000454555 PPIAL4CA0A0B4J2A2 164 aa10.44□□□□□ -0.74
LINC00343-203ENST00000454555 SH2D7A6NKC9 451 aaPredicted RBP10.44□□□□□ -0.74
LINC00343-203ENST00000454555 B4DSR2 109 aa10.44□□□□□ -0.74
LINC00343-203ENST00000454555 PLGLAQ15195 96 aa10.44□□□□□ -0.74
LINC00343-203ENST00000454555 PSG3Q16557 428 aa10.44□□□□□ -0.74
LINC00343-203ENST00000454555 BVES-AS1Q5T3Y7 98 aa10.44□□□□□ -0.74
LINC00343-203ENST00000454555 PRNTQ86SH4 94 aa10.44□□□□□ -0.74
LINC00343-203ENST00000454555 OR4C5Q8NGB2 326 aa10.44□□□□□ -0.74
LINC00343-203ENST00000454555 RITA1Q96K30 269 aa10.44□□□□□ -0.74
LINC00343-203ENST00000454555 SGK494Q96LW2 274 aa10.44□□□□□ -0.74
LINC00343-203ENST00000454555 CD5LO43866 347 aa10.43□□□□□ -0.74
LINC00343-203ENST00000454555 PSMG4Q5JS54 123 aa10.43□□□□□ -0.74
LINC00343-203ENST00000454555 ASPHD1Q5U4P2 390 aa10.43□□□□□ -0.74
LINC00343-203ENST00000454555 FA2HQ7L5A8 372 aa10.43□□□□□ -0.74
LINC00343-203ENST00000454555 LINC01356Q8N9X3 169 aa10.43□□□□□ -0.74
LINC00343-203ENST00000454555 MAPK1IP1LQ8NDC0 245 aa10.43□□□□□ -0.74
LINC00343-203ENST00000454555 ZNF48Q96MX3 618 aaPredicted RBP10.43□□□□□ -0.74
LINC00343-203ENST00000454555 VPS13CQ709C8 3753 aa10.42□□□□□ -0.74
LINC00343-203ENST00000454555 NOTCH2Q04721 2471 aa10.42□□□□□ -0.74
LINC00343-203ENST00000454555 MSMBP08118 114 aa10.42□□□□□ -0.74
LINC00343-203ENST00000454555 CT45A10P0DMU9 189 aa10.42□□□□□ -0.74
LINC00343-203ENST00000454555 IGHV4-31P0DP07 118 aa10.42□□□□□ -0.74
LINC00343-203ENST00000454555 S100A7P31151 101 aa10.42□□□□□ -0.74
LINC00343-203ENST00000454555 CDKN1BP46527 198 aa10.42□□□□□ -0.74
LINC00343-203ENST00000454555 COX8CQ7Z4L0 72 aa10.42□□□□□ -0.74
LINC00343-203ENST00000454555 OR1N2Q8NGR9 330 aa10.42□□□□□ -0.74
LINC00343-203ENST00000454555 RPEQ96AT9 228 aa10.42□□□□□ -0.74
LINC00343-203ENST00000454555 PSG8Q9UQ74 426 aa10.42□□□□□ -0.74
LINC00343-203ENST00000454555 CCDC168Q8NDH2 2452 aa10.42□□□□□ -0.74
LINC00343-203ENST00000454555 NUDT3O95989 172 aa10.42□□□□□ -0.74
LINC00343-203ENST00000454555 IGKV1-17P01599 117 aa10.42□□□□□ -0.74
LINC00343-203ENST00000454555 PPIAL4GP0DN37 164 aa10.42□□□□□ -0.74
LINC00343-203ENST00000454555 COX8AP10176 69 aa10.42□□□□□ -0.74
LINC00343-203ENST00000454555 SEC11AP67812 179 aa10.42□□□□□ -0.74
LINC00343-203ENST00000454555 MPV17L2Q567V2 206 aa10.42□□□□□ -0.74
LINC00343-203ENST00000454555 RUSC1-AS1Q66K80 236 aa10.42□□□□□ -0.74
LINC00343-203ENST00000454555 SIGLEC15Q6ZMC9 328 aa10.42□□□□□ -0.74
LINC00343-203ENST00000454555 NPFFR1Q9GZQ6 430 aa10.42□□□□□ -0.74
LINC00343-203ENST00000454555 MALRD1Q5VYJ5 2156 aa10.41□□□□□ -0.74
LINC00343-203ENST00000454555 IGHV3-72A0A0B4J1Y9 119 aa10.41□□□□□ -0.74
LINC00343-203ENST00000454555 SCGB2A1O75556 95 aa10.41□□□□□ -0.74
LINC00343-203ENST00000454555 VAMP3Q15836 100 aa10.41□□□□□ -0.74
LINC00343-203ENST00000454555 ZC2HC1AQ96GY0 325 aa10.41□□□□□ -0.74
LINC00343-203ENST00000454555 ZNF747Q9BV97 191 aa10.41□□□□□ -0.74
LINC00343-203ENST00000454555 TMUB1Q9BVT8 246 aa10.41□□□□□ -0.74
LINC00343-203ENST00000454555 AAMDCQ9H7C9 122 aa10.41□□□□□ -0.74
LINC00343-203ENST00000454555 NAV3Q8IVL0 2385 aa10.4□□□□□ -0.74
LINC00343-203ENST00000454555 WI2-2373I1.2A0A1W2PRP0 233 aa10.4□□□□□ -0.74
LINC00343-203ENST00000454555 hDV102S1A0JD36 115 aa10.4□□□□□ -0.74
LINC00343-203ENST00000454555 TAX1BP3O14907 124 aa10.4□□□□□ -0.74
LINC00343-203ENST00000454555 SMAD7O15105 426 aaKnown RBP10.4□□□□□ -0.74
LINC00343-203ENST00000454555 GATA3P23771 443 aa10.4□□□□□ -0.74
LINC00343-203ENST00000454555 PCP4P48539 62 aa10.4□□□□□ -0.74
LINC00343-203ENST00000454555 PSG9Q00887 426 aa10.4□□□□□ -0.74
LINC00343-203ENST00000454555 EXOC3-AS1Q8N2X6 119 aa10.4□□□□□ -0.74
LINC00343-203ENST00000454555 PRSS3P2Q8NHM4 247 aa10.4□□□□□ -0.74
LINC00343-203ENST00000454555 RNF125Q96EQ8 232 aa10.4□□□□□ -0.74
LINC00343-203ENST00000454555 U3KQK5 164 aa10.4□□□□□ -0.74
LINC00343-203ENST00000454555 TRAV8-1A0A0A6YYK1 113 aa10.39□□□□□ -0.75
LINC00343-203ENST00000454555 LY6LH3BQJ8 138 aa10.39□□□□□ -0.75
LINC00343-203ENST00000454555 K7EIM0 57 aa10.39□□□□□ -0.75
LINC00343-203ENST00000454555 M0QZ24 198 aa10.39□□□□□ -0.75
LINC00343-203ENST00000454555 ARMS2P0C7Q2 107 aa10.39□□□□□ -0.75
LINC00343-203ENST00000454555 CNTFRP26992 372 aa10.39□□□□□ -0.75
LINC00343-203ENST00000454555 RBX1P62877 108 aa10.39□□□□□ -0.75
LINC00343-203ENST00000454555 LGALS9BQ3B8N2 356 aa10.39□□□□□ -0.75
LINC00343-203ENST00000454555 SAPCD1Q5SSQ6 148 aa10.39□□□□□ -0.75
LINC00343-203ENST00000454555 LGALS9CQ6DKI2 356 aa10.39□□□□□ -0.75
LINC00343-203ENST00000454555 C1orf122Q6ZSJ8 110 aa10.39□□□□□ -0.75
LINC00343-203ENST00000454555 PEF1Q9UBV8 284 aaKnown RBP10.39□□□□□ -0.75
LINC00343-203ENST00000454555 M0R1W7 72 aa10.39□□□□□ -0.75
LINC00343-203ENST00000454555 MRPS12O15235 138 aaKnown RBP10.39□□□□□ -0.75
LINC00343-203ENST00000454555 TGFAP01135 160 aa10.39□□□□□ -0.75
LINC00343-203ENST00000454555 GPR183P32249 361 aa10.39□□□□□ -0.75
LINC00343-203ENST00000454555 SRSF2Q01130 221 aaKnown RBP10.39□□□□□ -0.75
LINC00343-203ENST00000454555 PAX8Q06710 450 aa10.39□□□□□ -0.75
LINC00343-203ENST00000454555 LINC00173Q6ZV60 143 aa10.39□□□□□ -0.75
LINC00343-203ENST00000454555 ZNF491Q8N8L2 437 aa10.39□□□□□ -0.75
LINC00343-203ENST00000454555 ZNF414Q96IQ9 312 aa10.39□□□□□ -0.75
LINC00343-203ENST00000454555 FBXL15Q9H469 300 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms