RNA–Protein interactions for RNA: ENST00000453744.6

UBE2D3-210, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 3,990 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-210ENST00000453744 SPRY4Q9C004 299 aa11.03□□□□□ -0.64
UBE2D3-210ENST00000453744 PSMB11A5LHX3 300 aa11.03□□□□□ -0.64
UBE2D3-210ENST00000453744 C19orf71A6NCJ1 209 aa11.03□□□□□ -0.64
UBE2D3-210ENST00000453744 NPYP01303 97 aa11.03□□□□□ -0.64
UBE2D3-210ENST00000453744 CR1LQ2VPA4 569 aa11.03□□□□□ -0.64
UBE2D3-210ENST00000453744 ZC2HC1BQ5TFG8 222 aa11.03□□□□□ -0.64
UBE2D3-210ENST00000453744 MLST8Q9BVC4 326 aa11.03□□□□□ -0.64
UBE2D3-210ENST00000453744 LOC107984156A0A0G2JMH3 177 aa11.02□□□□□ -0.64
UBE2D3-210ENST00000453744 MRPL51Q4U2R6 128 aaKnown RBP11.02□□□□□ -0.64
UBE2D3-210ENST00000453744 SCGB1D4Q6XE38 83 aa11.02□□□□□ -0.64
UBE2D3-210ENST00000453744 ARL17AQ8IVW1 177 aa11.02□□□□□ -0.64
UBE2D3-210ENST00000453744 FAM169BQ8N8A8 192 aa11.02□□□□□ -0.64
UBE2D3-210ENST00000453744 PRSS22Q9GZN4 317 aa11.02□□□□□ -0.65
UBE2D3-210ENST00000453744 ABCA2Q9BZC7 2435 aa11.02□□□□□ -0.65
UBE2D3-210ENST00000453744 IGHV1-8P0DP01 117 aa11.02□□□□□ -0.65
UBE2D3-210ENST00000453744 RPL11P62913 178 aaKnown RBP11.02□□□□□ -0.65
UBE2D3-210ENST00000453744 OR5A1Q8NGJ0 315 aa11.02□□□□□ -0.65
UBE2D3-210ENST00000453744 JMJD8Q96S16 334 aa11.02□□□□□ -0.65
UBE2D3-210ENST00000453744 KLF12Q9Y4X4 402 aa11.02□□□□□ -0.65
UBE2D3-210ENST00000453744 IGKV3-7A0A075B6H7 116 aa11.01□□□□□ -0.65
UBE2D3-210ENST00000453744 AMTNQ6UX39 209 aa11.01□□□□□ -0.65
UBE2D3-210ENST00000453744 ADAMTSL5Q6ZMM2 481 aa11.01□□□□□ -0.65
UBE2D3-210ENST00000453744 TEX48A0A1B0GUV7 120 aa11.01□□□□□ -0.65
UBE2D3-210ENST00000453744 A0A1W2PPM0 123 aa11.01□□□□□ -0.65
UBE2D3-210ENST00000453744 FAM104BQ5XKR9 115 aa11.01□□□□□ -0.65
UBE2D3-210ENST00000453744 BMI1P35226 326 aa11.01□□□□□ -0.65
UBE2D3-210ENST00000453744 SPANXN1Q5VSR9 72 aa11.01□□□□□ -0.65
UBE2D3-210ENST00000453744 Q6AWC8 147 aa11.01□□□□□ -0.65
UBE2D3-210ENST00000453744 DKK4Q9UBT3 224 aa11.01□□□□□ -0.65
UBE2D3-210ENST00000453744 TRBV19A0A075B6N1 114 aa11.01□□□□□ -0.65
UBE2D3-210ENST00000453744 A0A1B0GWB2 263 aa11.01□□□□□ -0.65
UBE2D3-210ENST00000453744 S100A4P26447 101 aaKnown RBP11.01□□□□□ -0.65
UBE2D3-210ENST00000453744 SRSF9Q13242 221 aaKnown RBP eCLIP11.01□□□□□ -0.65
UBE2D3-210ENST00000453744 ETDBQ3ZM63 59 aa11.01□□□□□ -0.65
UBE2D3-210ENST00000453744 C2orf91Q6ZV80 131 aa11.01□□□□□ -0.65
UBE2D3-210ENST00000453744 ARHGAP32A7KAX9 2087 aa11□□□□□ -0.65
UBE2D3-210ENST00000453744 TGFAP01135 160 aa11□□□□□ -0.65
UBE2D3-210ENST00000453744 C22orf34Q6ZV56 151 aa11□□□□□ -0.65
UBE2D3-210ENST00000453744 MSRB1Q9NZV6 116 aa11□□□□□ -0.65
UBE2D3-210ENST00000453744 ANKRD11Q6UB99 2663 aaPredicted RBP11□□□□□ -0.65
UBE2D3-210ENST00000453744 ANKHD1Q8IWZ3 2542 aaKnown RBP11□□□□□ -0.65
UBE2D3-210ENST00000453744 COL6A3P12111 3177 aa11□□□□□ -0.65
UBE2D3-210ENST00000453744 CRXO43186 299 aaPredicted RBP11□□□□□ -0.65
UBE2D3-210ENST00000453744 SIGMAR1Q99720 223 aa11□□□□□ -0.65
UBE2D3-210ENST00000453744 SPOCK3Q9BQ16 436 aa11□□□□□ -0.65
UBE2D3-210ENST00000453744 A0A1B0GW15 77 aa11□□□□□ -0.65
UBE2D3-210ENST00000453744 TMEM178BH3BS89 294 aa11□□□□□ -0.65
UBE2D3-210ENST00000453744 ZNF479Q96JC4 524 aa11□□□□□ -0.65
UBE2D3-210ENST00000453744 CHAC1Q9BUX1 264 aa11□□□□□ -0.65
UBE2D3-210ENST00000453744 IGHV1-3A0A0C4DH29 117 aa10.99□□□□□ -0.65
UBE2D3-210ENST00000453744 TIMM23O14925 209 aa10.99□□□□□ -0.65
UBE2D3-210ENST00000453744 CLEC3BP05452 202 aa10.99□□□□□ -0.65
UBE2D3-210ENST00000453744 GATA1P15976 413 aaPredicted RBP10.99□□□□□ -0.65
UBE2D3-210ENST00000453744 MFAP4P55083 255 aa10.99□□□□□ -0.65
UBE2D3-210ENST00000453744 GFRALQ6UXV0 394 aa10.99□□□□□ -0.65
UBE2D3-210ENST00000453744 ZNF502Q8TBZ5 544 aa10.99□□□□□ -0.65
UBE2D3-210ENST00000453744 TSSC4Q9Y5U2 329 aaPredicted RBP10.99□□□□□ -0.65
UBE2D3-210ENST00000453744 IGLV3-9A0A075B6K5 115 aa10.99□□□□□ -0.65
UBE2D3-210ENST00000453744 GATA4P43694 442 aa10.99□□□□□ -0.65
UBE2D3-210ENST00000453744 ADIPOQQ15848 244 aa10.99□□□□□ -0.65
UBE2D3-210ENST00000453744 ECSCRQ19T08 205 aa10.99□□□□□ -0.65
UBE2D3-210ENST00000453744 ASCL5Q7RTU5 278 aa10.99□□□□□ -0.65
UBE2D3-210ENST00000453744 TMEM158Q8WZ71 300 aa10.99□□□□□ -0.65
UBE2D3-210ENST00000453744 NDUFS7O75251 213 aa10.99□□□□□ -0.65
UBE2D3-210ENST00000453744 IGKCP01834 107 aa10.99□□□□□ -0.65
UBE2D3-210ENST00000453744 HLA-DMBP28068 263 aa10.99□□□□□ -0.65
UBE2D3-210ENST00000453744 FXYD2P54710 66 aa10.99□□□□□ -0.65
UBE2D3-210ENST00000453744 CLEC2AQ6UVW9 174 aa10.99□□□□□ -0.65
UBE2D3-210ENST00000453744 C7orf69Q9H7B7 122 aa10.99□□□□□ -0.65
UBE2D3-210ENST00000453744 RALYQ9UKM9 306 aaKnown RBP10.99□□□□□ -0.65
UBE2D3-210ENST00000453744 C19orf67A6NJJ6 358 aa10.98□□□□□ -0.65
UBE2D3-210ENST00000453744 CDX4O14627 284 aaPredicted RBP10.98□□□□□ -0.65
UBE2D3-210ENST00000453744 LGALS9BQ3B8N2 356 aa10.98□□□□□ -0.65
UBE2D3-210ENST00000453744 LGALS9CQ6DKI2 356 aa10.98□□□□□ -0.65
UBE2D3-210ENST00000453744 TTC9CQ8N5M4 171 aa10.98□□□□□ -0.65
UBE2D3-210ENST00000453744 WFDC12Q8WWY7 111 aa10.98□□□□□ -0.65
UBE2D3-210ENST00000453744 TRAV40A0A0B4J280 105 aa10.98□□□□□ -0.65
UBE2D3-210ENST00000453744 H3BVH4 76 aa10.98□□□□□ -0.65
UBE2D3-210ENST00000453744 RPL7P18124 248 aaKnown RBP10.98□□□□□ -0.65
UBE2D3-210ENST00000453744 ZNF883P0CG24 379 aa10.98□□□□□ -0.65
UBE2D3-210ENST00000453744 SHANK2-AS3Q9BTD1 123 aa10.98□□□□□ -0.65
UBE2D3-210ENST00000453744 SCGB1C2P0DMR2 95 aa10.97□□□□□ -0.65
UBE2D3-210ENST00000453744 ZNF418Q8TF45 676 aaPredicted RBP10.97□□□□□ -0.65
UBE2D3-210ENST00000453744 H3BMG7 143 aa10.97□□□□□ -0.65
UBE2D3-210ENST00000453744 IGLV2-23P01705 113 aa10.97□□□□□ -0.65
UBE2D3-210ENST00000453744 AZU1P20160 251 aa10.97□□□□□ -0.65
UBE2D3-210ENST00000453744 LOXP28300 417 aaPredicted RBP10.97□□□□□ -0.65
UBE2D3-210ENST00000453744 MYCNOSP40205 109 aa10.97□□□□□ -0.65
UBE2D3-210ENST00000453744 SEM1Q6ZVN7 128 aa10.97□□□□□ -0.65
UBE2D3-210ENST00000453744 SH2D6Q7Z4S9 175 aa10.97□□□□□ -0.65
UBE2D3-210ENST00000453744 CTSZQ9UBR2 303 aa10.97□□□□□ -0.65
UBE2D3-210ENST00000453744 TLN2Q9Y4G6 2542 aa10.97□□□□□ -0.65
UBE2D3-210ENST00000453744 IGKV1-17P01599 117 aa10.97□□□□□ -0.65
UBE2D3-210ENST00000453744 MGPP08493 103 aa10.97□□□□□ -0.65
UBE2D3-210ENST00000453744 ERCC8Q13216 396 aa10.97□□□□□ -0.65
UBE2D3-210ENST00000453744 DPM2O94777 84 aa10.96□□□□□ -0.65
UBE2D3-210ENST00000453744 FTH1P19P0C7X4 201 aa10.96□□□□□ -0.65
UBE2D3-210ENST00000453744 RPS20P60866 119 aaKnown RBP10.96□□□□□ -0.65
UBE2D3-210ENST00000453744 NPFFR1Q9GZQ6 430 aa10.96□□□□□ -0.65
UBE2D3-210ENST00000453744 NCOR1P1Q9H4R4 102 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms