RNA–Protein interactions for RNA: ENST00000447216.2

TRAPPC4-203, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 980 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-203ENST00000447216 CMC4P56277 68 aaPredicted RBP13.34□□□□□ -0.27
TRAPPC4-203ENST00000447216 LYPD1Q8N2G4 141 aa13.34□□□□□ -0.27
TRAPPC4-203ENST00000447216 RPUSD4Q96CM3 377 aaKnown RBP13.34□□□□□ -0.27
TRAPPC4-203ENST00000447216 CITED4Q96RK1 184 aa13.34□□□□□ -0.27
TRAPPC4-203ENST00000447216 GGTLC3B5MD39 225 aa13.33□□□□□ -0.28
TRAPPC4-203ENST00000447216 ZNF705DP0CH99 300 aaPredicted RBP13.33□□□□□ -0.28
TRAPPC4-203ENST00000447216 ZNF705BP0CI00 300 aaPredicted RBP13.33□□□□□ -0.28
TRAPPC4-203ENST00000447216 SUMO1P63165 101 aaKnown RBP13.33□□□□□ -0.28
TRAPPC4-203ENST00000447216 GDF5OSQ5U4N7 250 aa13.33□□□□□ -0.28
TRAPPC4-203ENST00000447216 ZNF767PQ75MW2 155 aa13.33□□□□□ -0.28
TRAPPC4-203ENST00000447216 FAM110AQ9BQ89 295 aa13.33□□□□□ -0.28
TRAPPC4-203ENST00000447216 RPH3ALQ9UNE2 315 aa13.33□□□□□ -0.28
TRAPPC4-203ENST00000447216 A0A1W2PRE2 83 aa13.32□□□□□ -0.28
TRAPPC4-203ENST00000447216 SLC25A5P05141 298 aaKnown RBP13.32□□□□□ -0.28
TRAPPC4-203ENST00000447216 ATP5G3P48201 142 aa13.32□□□□□ -0.28
TRAPPC4-203ENST00000447216 GNG5P63218 68 aa13.32□□□□□ -0.28
TRAPPC4-203ENST00000447216 ACTL10Q5JWF8 245 aa13.32□□□□□ -0.28
TRAPPC4-203ENST00000447216 CST9LP1Q5W188 147 aa13.32□□□□□ -0.28
TRAPPC4-203ENST00000447216 LYPD6BQ8NI32 183 aa13.32□□□□□ -0.28
TRAPPC4-203ENST00000447216 SRD5A3Q9H8P0 318 aa13.32□□□□□ -0.28
TRAPPC4-203ENST00000447216 CLEC5AQ9NY25 188 aa13.32□□□□□ -0.28
TRAPPC4-203ENST00000447216 PRELID1Q9Y255 219 aa13.32□□□□□ -0.28
TRAPPC4-203ENST00000447216 K7EIL1 84 aa13.31□□□□□ -0.28
TRAPPC4-203ENST00000447216 PPT1P50897 306 aa13.31□□□□□ -0.28
TRAPPC4-203ENST00000447216 HAGHQ16775 308 aa13.31□□□□□ -0.28
TRAPPC4-203ENST00000447216 MRPL53Q96EL3 112 aaKnown RBP13.31□□□□□ -0.28
TRAPPC4-203ENST00000447216 FOXI2Q6ZQN5 318 aa13.3□□□□□ -0.28
TRAPPC4-203ENST00000447216 SAV1Q9H4B6 383 aaPredicted RBP13.3□□□□□ -0.28
TRAPPC4-203ENST00000447216 MANBALQ9NQG1 85 aa13.3□□□□□ -0.28
TRAPPC4-203ENST00000447216 IGKV2-40A0A087WW87 121 aaPredicted RBP13.29□□□□□ -0.28
TRAPPC4-203ENST00000447216 A0A0J9YX75 114 aa13.29□□□□□ -0.28
TRAPPC4-203ENST00000447216 IGKV2D-40P01614 121 aaPredicted RBP13.29□□□□□ -0.28
TRAPPC4-203ENST00000447216 IGKV3-20P01619 116 aa13.29□□□□□ -0.28
TRAPPC4-203ENST00000447216 CSN1S1P47710 185 aa13.29□□□□□ -0.28
TRAPPC4-203ENST00000447216 HIST1H1AQ02539 215 aaPredicted RBP13.29□□□□□ -0.28
TRAPPC4-203ENST00000447216 EBLN2Q6P2I7 272 aa13.29□□□□□ -0.28
TRAPPC4-203ENST00000447216 OR8A1Q8NGG7 326 aa13.29□□□□□ -0.28
TRAPPC4-203ENST00000447216 CMTM2Q8TAZ6 248 aa13.29□□□□□ -0.28
TRAPPC4-203ENST00000447216 TUBA4BQ9H853 241 aa13.29□□□□□ -0.28
TRAPPC4-203ENST00000447216 ARL2-SNX15V9GYD0 113 aa13.29□□□□□ -0.28
TRAPPC4-203ENST00000447216 DIRC3C9JPN6 131 aa13.28□□□□□ -0.28
TRAPPC4-203ENST00000447216 IFNA1P01562 189 aa13.28□□□□□ -0.28
TRAPPC4-203ENST00000447216 IGHV4-30-4P0DP06 118 aa13.28□□□□□ -0.28
TRAPPC4-203ENST00000447216 HLA-DRB4P13762 266 aa13.28□□□□□ -0.28
TRAPPC4-203ENST00000447216 RPL35AP18077 110 aaKnown RBP13.28□□□□□ -0.28
TRAPPC4-203ENST00000447216 RAB14P61106 215 aa13.28□□□□□ -0.28
TRAPPC4-203ENST00000447216 ERCC8Q13216 396 aa13.28□□□□□ -0.28
TRAPPC4-203ENST00000447216 GOLT1AQ6ZVE7 132 aa13.28□□□□□ -0.28
TRAPPC4-203ENST00000447216 STHQ8IWL8 128 aa13.28□□□□□ -0.28
TRAPPC4-203ENST00000447216 C5orf17Q8NAS9 161 aa13.28□□□□□ -0.28
TRAPPC4-203ENST00000447216 HLA-DRB4X5D2U9 266 aa13.28□□□□□ -0.28
TRAPPC4-203ENST00000447216 LOC102723971A0A1B0GUV8 181 aa13.27□□□□□ -0.29
TRAPPC4-203ENST00000447216 RBMY1BA6NDE4 496 aaKnown RBP13.27□□□□□ -0.29
TRAPPC4-203ENST00000447216 RBMY1EA6NEQ0 496 aaKnown RBP13.27□□□□□ -0.29
TRAPPC4-203ENST00000447216 C11orf94C9JXX5 98 aa13.27□□□□□ -0.29
TRAPPC4-203ENST00000447216 H3BMM0 161 aa13.27□□□□□ -0.29
TRAPPC4-203ENST00000447216 RBMY1DP0C7P1 496 aaKnown RBP13.27□□□□□ -0.29
TRAPPC4-203ENST00000447216 BCL2P10415 239 aa13.27□□□□□ -0.29
TRAPPC4-203ENST00000447216 CNN1P51911 297 aaKnown RBP13.27□□□□□ -0.29
TRAPPC4-203ENST00000447216 PMS2P11Q13670 270 aa13.27□□□□□ -0.29
TRAPPC4-203ENST00000447216 CCDC28AQ8IWP9 274 aa13.27□□□□□ -0.29
TRAPPC4-203ENST00000447216 OR4B1Q8NGF8 309 aa13.27□□□□□ -0.29
TRAPPC4-203ENST00000447216 OR10J6PQ8NGY7 276 aa13.27□□□□□ -0.29
TRAPPC4-203ENST00000447216 RXFP4Q8TDU9 374 aa13.27□□□□□ -0.29
TRAPPC4-203ENST00000447216 RARRES2Q99969 163 aa13.27□□□□□ -0.29
TRAPPC4-203ENST00000447216 VGLL1Q99990 258 aa13.27□□□□□ -0.29
TRAPPC4-203ENST00000447216 EPDR1Q9UM22 224 aa13.27□□□□□ -0.29
TRAPPC4-203ENST00000447216 TRPT1Q86TN4 253 aaKnown RBP13.26□□□□□ -0.29
TRAPPC4-203ENST00000447216 NKX6-2Q9C056 277 aaPredicted RBP13.26□□□□□ -0.29
TRAPPC4-203ENST00000447216 RBFOX3A6NFN3 312 aa13.25□□□□□ -0.29
TRAPPC4-203ENST00000447216 PEX7O00628 323 aa13.25□□□□□ -0.29
TRAPPC4-203ENST00000447216 RGS13O14921 159 aa13.25□□□□□ -0.29
TRAPPC4-203ENST00000447216 DUSP14O95147 198 aaKnown RBP13.25□□□□□ -0.29
TRAPPC4-203ENST00000447216 TCRAP04437 139 aa13.25□□□□□ -0.29
TRAPPC4-203ENST00000447216 DEFA6Q01524 100 aa13.25□□□□□ -0.29
TRAPPC4-203ENST00000447216 TOR2AQ5JU69 321 aa13.25□□□□□ -0.29
TRAPPC4-203ENST00000447216 CLLU1Q5K131 121 aa13.25□□□□□ -0.29
TRAPPC4-203ENST00000447216 ASCL2Q99929 193 aa13.25□□□□□ -0.29
TRAPPC4-203ENST00000447216 VAX2Q9UIW0 290 aa13.25□□□□□ -0.29
TRAPPC4-203ENST00000447216 SCO2A0A1W2PP80 73 aa13.24□□□□□ -0.29
TRAPPC4-203ENST00000447216 NPIPB6E9PJ23 425 aa13.24□□□□□ -0.29
TRAPPC4-203ENST00000447216 FXYD7P58549 80 aa13.24□□□□□ -0.29
TRAPPC4-203ENST00000447216 MEF2BQ02080 365 aaPredicted RBP13.24□□□□□ -0.29
TRAPPC4-203ENST00000447216 DEFB121Q5J5C9 76 aa13.24□□□□□ -0.29
TRAPPC4-203ENST00000447216 SGK494Q96LW2 274 aa13.24□□□□□ -0.29
TRAPPC4-203ENST00000447216 AGPAT4-IT1Q9H0P7 198 aa13.24□□□□□ -0.29
TRAPPC4-203ENST00000447216 TRAV8-1A0A0A6YYK1 113 aa13.23□□□□□ -0.29
TRAPPC4-203ENST00000447216 TRAV34A0A0B4J273 112 aa13.23□□□□□ -0.29
TRAPPC4-203ENST00000447216 ZNF506Q5JVG8 444 aa13.23□□□□□ -0.29
TRAPPC4-203ENST00000447216 ARL6IP6Q8N6S5 226 aa13.23□□□□□ -0.29
TRAPPC4-203ENST00000447216 MRAPQ8TCY5 172 aa13.23□□□□□ -0.29
TRAPPC4-203ENST00000447216 LINC00479Q96M42 142 aa13.23□□□□□ -0.29
TRAPPC4-203ENST00000447216 FAM210AQ96ND0 272 aa13.23□□□□□ -0.29
TRAPPC4-203ENST00000447216 ATG101Q9BSB4 218 aa13.23□□□□□ -0.29
TRAPPC4-203ENST00000447216 LOC102724200A0A096LPH7 203 aaPredicted RBP13.22□□□□□ -0.29
TRAPPC4-203ENST00000447216 A8MTW9 85 aa13.22□□□□□ -0.29
TRAPPC4-203ENST00000447216 FRMD6-AS1P0C7T7 363 aa13.22□□□□□ -0.29
TRAPPC4-203ENST00000447216 CT45A10P0DMU9 189 aa13.22□□□□□ -0.29
TRAPPC4-203ENST00000447216 AMTNQ6UX39 209 aa13.22□□□□□ -0.29
TRAPPC4-203ENST00000447216 C9orf47Q6ZRZ4 202 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms