RNA–Protein interactions for RNA: ENST00000445369.2

CLDN9-201, Transcript of claudin 9, humanhuman

APPRIS P1 BASIC

Gene CLDN9, Length 2,050 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN9-201ENST00000445369 SSTP61278 116 aa13.83□□□□□ -0.2
CLDN9-201ENST00000445369 CCDC140Q96MF4 163 aa13.83□□□□□ -0.2
CLDN9-201ENST00000445369 PRR25Q96S07 402 aa13.83□□□□□ -0.2
CLDN9-201ENST00000445369 CLEC5AQ9NY25 188 aa13.83□□□□□ -0.2
CLDN9-201ENST00000445369 LINC01548A6NM66 108 aa13.82□□□□□ -0.2
CLDN9-201ENST00000445369 G3V318 75 aa13.82□□□□□ -0.2
CLDN9-201ENST00000445369 M0QZK8 103 aa13.82□□□□□ -0.2
CLDN9-201ENST00000445369 LINC00614P0C842 121 aa13.82□□□□□ -0.2
CLDN9-201ENST00000445369 SAPCD1Q5SSQ6 148 aa13.82□□□□□ -0.2
CLDN9-201ENST00000445369 DMRTA1Q5VZB9 504 aa13.82□□□□□ -0.2
CLDN9-201ENST00000445369 C5orf56Q8N8D9 126 aa13.82□□□□□ -0.2
CLDN9-201ENST00000445369 CLEC3BP05452 202 aa13.81□□□□□ -0.2
CLDN9-201ENST00000445369 IGLC3P0DOY3 106 aa13.81□□□□□ -0.2
CLDN9-201ENST00000445369 RELQ04864 619 aaPredicted RBP13.81□□□□□ -0.2
CLDN9-201ENST00000445369 ATOH7Q8N100 152 aa13.81□□□□□ -0.2
CLDN9-201ENST00000445369 A0A087X0K7 114 aa13.81□□□□□ -0.2
CLDN9-201ENST00000445369 TMEM189A5PLL7 270 aa13.81□□□□□ -0.2
CLDN9-201ENST00000445369 HLA-DMBP28068 263 aa13.81□□□□□ -0.2
CLDN9-201ENST00000445369 PAX8Q06710 450 aa13.81□□□□□ -0.2
CLDN9-201ENST00000445369 ABCA2Q9BZC7 2435 aa13.8□□□□□ -0.2
CLDN9-201ENST00000445369 BUB3O43684 328 aa13.8□□□□□ -0.2
CLDN9-201ENST00000445369 RAB9AP51151 201 aa13.8□□□□□ -0.2
CLDN9-201ENST00000445369 IGFL4Q6B9Z1 124 aa13.8□□□□□ -0.2
CLDN9-201ENST00000445369 ZNF493Q6ZR52 646 aa13.8□□□□□ -0.2
CLDN9-201ENST00000445369 SPATA12Q7Z6I5 190 aa13.8□□□□□ -0.2
CLDN9-201ENST00000445369 VGLL1Q99990 258 aa13.8□□□□□ -0.2
CLDN9-201ENST00000445369 TMEM70Q9BUB7 260 aa13.8□□□□□ -0.2
CLDN9-201ENST00000445369 UQCR10Q9UDW1 63 aa13.8□□□□□ -0.2
CLDN9-201ENST00000445369 CLPSL1A2RUU4 121 aa13.79□□□□□ -0.2
CLDN9-201ENST00000445369 CRXO43186 299 aaPredicted RBP13.79□□□□□ -0.2
CLDN9-201ENST00000445369 Q8TAT8 98 aa13.79□□□□□ -0.2
CLDN9-201ENST00000445369 TPPP3Q9BW30 176 aa13.79□□□□□ -0.2
CLDN9-201ENST00000445369 GOSR1O95249 250 aa13.79□□□□□ -0.2
CLDN9-201ENST00000445369 MAJINQ3KP22 176 aa13.79□□□□□ -0.2
CLDN9-201ENST00000445369 CYB5R2Q6BCY4 276 aa13.79□□□□□ -0.2
CLDN9-201ENST00000445369 CLEC19AQ6UXS0 136 aa13.79□□□□□ -0.2
CLDN9-201ENST00000445369 KLHDC1Q8N7A1 406 aa13.79□□□□□ -0.2
CLDN9-201ENST00000445369 EEF1AKMT3Q96AZ1 226 aa13.79□□□□□ -0.2
CLDN9-201ENST00000445369 LYZL1Q6UWQ5 148 aa13.78□□□□□ -0.2
CLDN9-201ENST00000445369 TRAV9-2A0A087WT02 112 aa13.78□□□□□ -0.2
CLDN9-201ENST00000445369 TMSB15BA0A087X1C1 80 aa13.78□□□□□ -0.2
CLDN9-201ENST00000445369 LEPROTL1O95214 131 aa13.78□□□□□ -0.2
CLDN9-201ENST00000445369 ZNF80P51504 273 aaPredicted RBP13.78□□□□□ -0.2
CLDN9-201ENST00000445369 ZNF138P52744 262 aa13.78□□□□□ -0.2
CLDN9-201ENST00000445369 LINC00173Q6ZV60 143 aa13.78□□□□□ -0.2
CLDN9-201ENST00000445369 MOB4Q9Y3A3 225 aa13.78□□□□□ -0.2
CLDN9-201ENST00000445369 PKD1L2Q7Z442 2459 aa13.77□□□□□ -0.2
CLDN9-201ENST00000445369 TRBV7-1A0A0A6YYK4 115 aa13.77□□□□□ -0.21
CLDN9-201ENST00000445369 C19orf54Q5BKX5 351 aa13.77□□□□□ -0.21
CLDN9-201ENST00000445369 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.77□□□□□ -0.21
CLDN9-201ENST00000445369 TMEM219Q86XT9 240 aa13.77□□□□□ -0.21
CLDN9-201ENST00000445369 AKAP6Q13023 2319 aa13.77□□□□□ -0.21
CLDN9-201ENST00000445369 IGHV1-69DA0A0B4J2H0 117 aa13.76□□□□□ -0.21
CLDN9-201ENST00000445369 IGHV1-69P01742 117 aa13.76□□□□□ -0.21
CLDN9-201ENST00000445369 OR5AL1P0C617 328 aa13.76□□□□□ -0.21
CLDN9-201ENST00000445369 SVEP1Q4LDE5 3571 aa13.76□□□□□ -0.21
CLDN9-201ENST00000445369 IGHV3OR16-10A0A075B7F0 116 aa13.76□□□□□ -0.21
CLDN9-201ENST00000445369 IGHV4-61A0A0C4DH41 118 aa13.76□□□□□ -0.21
CLDN9-201ENST00000445369 C20orf202A1L168 122 aa13.76□□□□□ -0.21
CLDN9-201ENST00000445369 SYS1-DBNDD2H3BUS1 97 aa13.76□□□□□ -0.21
CLDN9-201ENST00000445369 BMI1P35226 326 aa13.76□□□□□ -0.21
CLDN9-201ENST00000445369 RPS20P60866 119 aaKnown RBP13.76□□□□□ -0.21
CLDN9-201ENST00000445369 PIFOQ8TCI5 191 aa13.76□□□□□ -0.21
CLDN9-201ENST00000445369 PIMREGQ9BSJ6 248 aa13.76□□□□□ -0.21
CLDN9-201ENST00000445369 TMEM213A2RRL7 107 aa13.75□□□□□ -0.21
CLDN9-201ENST00000445369 TCAPO15273 167 aa13.75□□□□□ -0.21
CLDN9-201ENST00000445369 CRIP2P52943 208 aaPredicted RBP13.75□□□□□ -0.21
CLDN9-201ENST00000445369 SLC50A1Q9BRV3 221 aa13.75□□□□□ -0.21
CLDN9-201ENST00000445369 RPLP1P05386 114 aaKnown RBP13.75□□□□□ -0.21
CLDN9-201ENST00000445369 CSN3P07498 182 aa13.75□□□□□ -0.21
CLDN9-201ENST00000445369 SRSF2Q01130 221 aaKnown RBP13.75□□□□□ -0.21
CLDN9-201ENST00000445369 PSMG3-AS1Q96PY0 264 aa13.75□□□□□ -0.21
CLDN9-201ENST00000445369 U3KQK5 164 aa13.75□□□□□ -0.21
CLDN9-201ENST00000445369 TRAV40A0A0B4J280 105 aa13.74□□□□□ -0.21
CLDN9-201ENST00000445369 RBAKDNA6NC62 111 aa13.74□□□□□ -0.21
CLDN9-201ENST00000445369 PRAC2D3DTV9 90 aa13.74□□□□□ -0.21
CLDN9-201ENST00000445369 IGLC6P0CF74 106 aa13.74□□□□□ -0.21
CLDN9-201ENST00000445369 Q6ZN92 141 aa13.74□□□□□ -0.21
CLDN9-201ENST00000445369 ZNF575Q86XF7 245 aa13.74□□□□□ -0.21
CLDN9-201ENST00000445369 TRAV41A0A0B4J266 112 aa13.73□□□□□ -0.21
CLDN9-201ENST00000445369 IGHV3-66A0A0C4DH42 116 aa13.73□□□□□ -0.21
CLDN9-201ENST00000445369 IGLL1P15814 213 aa13.73□□□□□ -0.21
CLDN9-201ENST00000445369 HNRNPA3P51991 378 aaKnown RBP13.73□□□□□ -0.21
CLDN9-201ENST00000445369 FAM104BQ5XKR9 115 aa13.73□□□□□ -0.21
CLDN9-201ENST00000445369 RNF182Q8N6D2 247 aa13.73□□□□□ -0.21
CLDN9-201ENST00000445369 C10orf105Q8TEF2 133 aa13.73□□□□□ -0.21
CLDN9-201ENST00000445369 ATP6V0BQ99437 205 aa13.73□□□□□ -0.21
CLDN9-201ENST00000445369 CCL19Q99731 98 aa13.73□□□□□ -0.21
CLDN9-201ENST00000445369 AP5S1Q9NUS5 200 aa13.73□□□□□ -0.21
CLDN9-201ENST00000445369 ASH1LQ9NR48 2969 aaKnown RBP13.73□□□□□ -0.21
CLDN9-201ENST00000445369 OR4C46A6NHA9 309 aa13.73□□□□□ -0.21
CLDN9-201ENST00000445369 ATP5G2Q06055 141 aa13.73□□□□□ -0.21
CLDN9-201ENST00000445369 ERCC8Q13216 396 aa13.73□□□□□ -0.21
CLDN9-201ENST00000445369 BRD3OSQ6XYD6 125 aa13.73□□□□□ -0.21
CLDN9-201ENST00000445369 FER1L6-AS1Q8NA97 138 aa13.73□□□□□ -0.21
CLDN9-201ENST00000445369 METTL26Q96S19 204 aa13.73□□□□□ -0.21
CLDN9-201ENST00000445369 MEGF9Q9H1U4 602 aa13.73□□□□□ -0.21
CLDN9-201ENST00000445369 U3KQE9 123 aa13.73□□□□□ -0.21
CLDN9-201ENST00000445369 AMN1Q8IY45 258 aa13.72□□□□□ -0.21
CLDN9-201ENST00000445369 FAM223BA6NKX1 122 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms