RNA–Protein interactions for RNA: ENST00000440293.5

HDAC7-213, Transcript of histone deacetylase 7, human

TSL 4

Gene HDAC7, Length 580 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDAC7-213	ENST00000440293	LGALS9C	Q6DKI2	356 aa		13.08	□□□□□ -0.32
HDAC7-213	ENST00000440293	BLNK	Q8WV28	456 aa		13.08	□□□□□ -0.32
HDAC7-213	ENST00000440293	RNF141	Q8WVD5	230 aa		13.08	□□□□□ -0.32
HDAC7-213	ENST00000440293	C11orf68	Q9H3H3	251 aa	Known RBP	13.08	□□□□□ -0.32
HDAC7-213	ENST00000440293	PRELID1	Q9Y255	219 aa		13.08	□□□□□ -0.32
HDAC7-213	ENST00000440293		X6R8D5	127 aa		13.08	□□□□□ -0.32
HDAC7-213	ENST00000440293	FRAS1	Q86XX4	4008 aa		13.08	□□□□□ -0.32
HDAC7-213	ENST00000440293		A0A1W2PPV4	95 aa		13.07	□□□□□ -0.32
HDAC7-213	ENST00000440293	SMLR1	H3BR10	107 aa		13.07	□□□□□ -0.32
HDAC7-213	ENST00000440293	OR7C2	O60412	319 aa		13.07	□□□□□ -0.32
HDAC7-213	ENST00000440293	ATP6V0C	P27449	155 aa		13.07	□□□□□ -0.32
HDAC7-213	ENST00000440293	OR10G4	Q8NGN3	311 aa		13.07	□□□□□ -0.32
HDAC7-213	ENST00000440293	OR10G9	Q8NGN4	311 aa		13.07	□□□□□ -0.32
HDAC7-213	ENST00000440293	OR10G7	Q8NGN6	311 aa		13.07	□□□□□ -0.32
HDAC7-213	ENST00000440293	OR10J6P	Q8NGY7	276 aa		13.07	□□□□□ -0.32
HDAC7-213	ENST00000440293	PSMG3	Q9BT73	122 aa	Predicted RBP	13.07	□□□□□ -0.32
HDAC7-213	ENST00000440293	PRAC2	D3DTV9	90 aa		13.06	□□□□□ -0.32
HDAC7-213	ENST00000440293	TAAR5	O14804	337 aa		13.06	□□□□□ -0.32
HDAC7-213	ENST00000440293	ARPC5	O15511	151 aa		13.06	□□□□□ -0.32
HDAC7-213	ENST00000440293	OR10J4	P0C629	311 aa		13.06	□□□□□ -0.32
HDAC7-213	ENST00000440293	SERF2	P84101	59 aa		13.06	□□□□□ -0.32
HDAC7-213	ENST00000440293	KHDC3L	Q587J8	217 aa		13.06	□□□□□ -0.32
HDAC7-213	ENST00000440293	RPL7L1	Q6DKI1	246 aa	Known RBP	13.06	□□□□□ -0.32
HDAC7-213	ENST00000440293	ZNF705A	Q6ZN79	300 aa	Predicted RBP	13.06	□□□□□ -0.32
HDAC7-213	ENST00000440293		Q8NAQ8	132 aa		13.06	□□□□□ -0.32
HDAC7-213	ENST00000440293	OR2G3	Q8NGZ4	309 aa		13.06	□□□□□ -0.32
HDAC7-213	ENST00000440293	FXYD5	Q96DB9	178 aa		13.06	□□□□□ -0.32
HDAC7-213	ENST00000440293	MRPL53	Q96EL3	112 aa	Known RBP	13.06	□□□□□ -0.32
HDAC7-213	ENST00000440293	NEU1	Q99519	415 aa		13.06	□□□□□ -0.32
HDAC7-213	ENST00000440293	AAMDC	Q9H7C9	122 aa		13.06	□□□□□ -0.32
HDAC7-213	ENST00000440293	GOLT1B	Q9Y3E0	138 aa		13.06	□□□□□ -0.32
HDAC7-213	ENST00000440293	IGHV4-28	A0A0C4DH34	117 aa		13.05	□□□□□ -0.32
HDAC7-213	ENST00000440293	SMIM9	A6NGZ8	99 aa		13.05	□□□□□ -0.32
HDAC7-213	ENST00000440293	DEFB4A	O15263	64 aa		13.05	□□□□□ -0.32
HDAC7-213	ENST00000440293	MB	P02144	154 aa		13.05	□□□□□ -0.32
HDAC7-213	ENST00000440293	PRB4	P10163	310 aa	Predicted RBP	13.05	□□□□□ -0.32
HDAC7-213	ENST00000440293	RAB2A	P61019	212 aa		13.05	□□□□□ -0.32
HDAC7-213	ENST00000440293	SPINK13	Q1W4C9	94 aa		13.05	□□□□□ -0.32
HDAC7-213	ENST00000440293	GNPNAT1	Q96EK6	184 aa	Predicted RBP	13.05	□□□□□ -0.32
HDAC7-213	ENST00000440293	IGF2BP2-AS1	Q96M15	143 aa		13.05	□□□□□ -0.32
HDAC7-213	ENST00000440293	IGHV3OR16-12	A0A075B7B8	117 aa		13.04	□□□□□ -0.32
HDAC7-213	ENST00000440293	BOLA2-SMG1P6	H3BVE0	249 aa		13.04	□□□□□ -0.32
HDAC7-213	ENST00000440293		M0R2Z0	102 aa		13.04	□□□□□ -0.32
HDAC7-213	ENST00000440293	RBMY1A1	P0DJD3	496 aa	Known RBP	13.04	□□□□□ -0.32
HDAC7-213	ENST00000440293	RBMY1C	P0DJD4	496 aa		13.04	□□□□□ -0.32
HDAC7-213	ENST00000440293	RBMY1F	Q15415	496 aa	Known RBP	13.04	□□□□□ -0.32
HDAC7-213	ENST00000440293	FAM122C	Q6P4D5	195 aa		13.04	□□□□□ -0.32
HDAC7-213	ENST00000440293		Q6ZNX1	250 aa		13.04	□□□□□ -0.32
HDAC7-213	ENST00000440293	C1orf158	Q8N1D5	194 aa		13.04	□□□□□ -0.32
HDAC7-213	ENST00000440293	EXOC3-AS1	Q8N2X6	119 aa		13.04	□□□□□ -0.32
HDAC7-213	ENST00000440293	ZNF503	Q96F45	646 aa		13.04	□□□□□ -0.32
HDAC7-213	ENST00000440293	KMT2A	Q03164	3969 aa		13.03	□□□□□ -0.32
HDAC7-213	ENST00000440293		M0R3E3	92 aa		13.03	□□□□□ -0.32
HDAC7-213	ENST00000440293	ICAM4	Q14773	271 aa		13.03	□□□□□ -0.32
HDAC7-213	ENST00000440293	PQLC2	Q6ZP29	291 aa		13.03	□□□□□ -0.32
HDAC7-213	ENST00000440293	LYPD1	Q8N2G4	141 aa		13.03	□□□□□ -0.32
HDAC7-213	ENST00000440293	C11orf45	Q8TAV5	145 aa		13.03	□□□□□ -0.32
HDAC7-213	ENST00000440293	HERC2	O95714	4834 aa		13.03	□□□□□ -0.32
HDAC7-213	ENST00000440293	HMSD	A8MTL9	139 aa		13.02	□□□□□ -0.33
HDAC7-213	ENST00000440293	CRX	O43186	299 aa	Predicted RBP	13.02	□□□□□ -0.33
HDAC7-213	ENST00000440293	TCTA	P57738	103 aa		13.02	□□□□□ -0.33
HDAC7-213	ENST00000440293	UBE2L3	P68036	154 aa	Known RBP	13.02	□□□□□ -0.33
HDAC7-213	ENST00000440293	PHLDA1	Q8WV24	401 aa	Predicted RBP	13.02	□□□□□ -0.33
HDAC7-213	ENST00000440293	TMEM208	Q9BTX3	173 aa		13.02	□□□□□ -0.33
HDAC7-213	ENST00000440293	SH3BGRL3	Q9H299	93 aa		13.02	□□□□□ -0.33
HDAC7-213	ENST00000440293	NPIPB6	E9PJ23	425 aa		13.01	□□□□□ -0.33
HDAC7-213	ENST00000440293	EIF3G	O75821	320 aa	Known RBP eCLIP	13.01	□□□□□ -0.33
HDAC7-213	ENST00000440293	INS	P01308	110 aa		13.01	□□□□□ -0.33
HDAC7-213	ENST00000440293	TSPO	P30536	169 aa		13.01	□□□□□ -0.33
HDAC7-213	ENST00000440293	CDKN1B	P46527	198 aa		13.01	□□□□□ -0.33
HDAC7-213	ENST00000440293	CDC34	P49427	236 aa	Predicted RBP	13.01	□□□□□ -0.33
HDAC7-213	ENST00000440293	RAN	P62826	216 aa	Known RBP	13.01	□□□□□ -0.33
HDAC7-213	ENST00000440293	RPP25L	Q8N5L8	163 aa	Known RBP	13.01	□□□□□ -0.33
HDAC7-213	ENST00000440293	OR11H4	Q8NGC9	324 aa		13.01	□□□□□ -0.33
HDAC7-213	ENST00000440293	TRAV12-2	A0A075B6T6	113 aa		13	□□□□□ -0.33
HDAC7-213	ENST00000440293	TMEM189	A5PLL7	270 aa		13	□□□□□ -0.33
HDAC7-213	ENST00000440293	HBE1	P02100	147 aa		13	□□□□□ -0.33
HDAC7-213	ENST00000440293	ZNF345	Q14585	488 aa		13	□□□□□ -0.33
HDAC7-213	ENST00000440293	KCNRG	Q8N5I3	272 aa		13	□□□□□ -0.33
HDAC7-213	ENST00000440293	RAB24	Q969Q5	203 aa		13	□□□□□ -0.33
HDAC7-213	ENST00000440293	PHYHIPL	Q96FC7	376 aa		13	□□□□□ -0.33
HDAC7-213	ENST00000440293	LINC00477	Q96M19	166 aa		13	□□□□□ -0.33
HDAC7-213	ENST00000440293	ACTR3C	Q9C0K3	210 aa	Predicted RBP	13	□□□□□ -0.33
HDAC7-213	ENST00000440293	CYTL1	Q9NRR1	136 aa		13	□□□□□ -0.33
HDAC7-213	ENST00000440293		A0A0D9SG52	128 aa		12.99	□□□□□ -0.33
HDAC7-213	ENST00000440293	HMGB3	O15347	200 aa	Known RBP	12.99	□□□□□ -0.33
HDAC7-213	ENST00000440293	CT45A10	P0DMU9	189 aa		12.99	□□□□□ -0.33
HDAC7-213	ENST00000440293	CSN1S1	P47710	185 aa		12.99	□□□□□ -0.33
HDAC7-213	ENST00000440293	NANOS2	P60321	138 aa	Known RBP	12.99	□□□□□ -0.33
HDAC7-213	ENST00000440293	RRN3P1	Q2M238	152 aa		12.99	□□□□□ -0.33
HDAC7-213	ENST00000440293	BAP18	Q8IXM2	172 aa		12.99	□□□□□ -0.33
HDAC7-213	ENST00000440293	ODF3	Q96PU9	254 aa		12.99	□□□□□ -0.33
HDAC7-213	ENST00000440293	ARPC5L	Q9BPX5	153 aa		12.99	□□□□□ -0.33
HDAC7-213	ENST00000440293		Q9H3A6	140 aa		12.99	□□□□□ -0.33
HDAC7-213	ENST00000440293	STAG3L2	P0CL84	134 aa		12.98	□□□□□ -0.33
HDAC7-213	ENST00000440293	STAG3L3	P0CL85	134 aa		12.98	□□□□□ -0.33
HDAC7-213	ENST00000440293	LEP	P41159	167 aa		12.98	□□□□□ -0.33
HDAC7-213	ENST00000440293	ERCC8	Q13216	396 aa		12.98	□□□□□ -0.33
HDAC7-213	ENST00000440293	ST6GAL2	Q96JF0	529 aa		12.98	□□□□□ -0.33
HDAC7-213	ENST00000440293	LINC01587	Q99440	93 aa		12.98	□□□□□ -0.33

Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms