RNA–Protein interactions for RNA: ENST00000436461.6

CALD1-209, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 1,614 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-209ENST00000436461 ACTL10Q5JWF8 245 aa12.43□□□□□ -0.42
CALD1-209ENST00000436461 RPUSD4Q96CM3 377 aaKnown RBP12.43□□□□□ -0.42
CALD1-209ENST00000436461 GNG13Q9P2W3 67 aa12.43□□□□□ -0.42
CALD1-209ENST00000436461 RPH3ALQ9UNE2 315 aa12.43□□□□□ -0.42
CALD1-209ENST00000436461 FAM74A7A6NL05 159 aa12.42□□□□□ -0.42
CALD1-209ENST00000436461 PAGE4O60829 102 aa12.42□□□□□ -0.42
CALD1-209ENST00000436461 HBE1P02100 147 aa12.42□□□□□ -0.42
CALD1-209ENST00000436461 SUMO1P63165 101 aaKnown RBP12.42□□□□□ -0.42
CALD1-209ENST00000436461 GNG5P63218 68 aa12.42□□□□□ -0.42
CALD1-209ENST00000436461 SRD5A3Q9H8P0 318 aa12.42□□□□□ -0.42
CALD1-209ENST00000436461 IGKV3-20P01619 116 aa12.41□□□□□ -0.42
CALD1-209ENST00000436461 NMBP08949 121 aa12.41□□□□□ -0.42
CALD1-209ENST00000436461 IGHV4-30-4P0DP06 118 aa12.41□□□□□ -0.42
CALD1-209ENST00000436461 ATP5G3P48201 142 aa12.41□□□□□ -0.42
CALD1-209ENST00000436461 CST9LP1Q5W188 147 aa12.41□□□□□ -0.42
CALD1-209ENST00000436461 FAM110AQ9BQ89 295 aa12.41□□□□□ -0.42
CALD1-209ENST00000436461 OTORQ9NRC9 128 aa12.41□□□□□ -0.42
CALD1-209ENST00000436461 LYPD1Q8N2G4 141 aa12.4□□□□□ -0.42
CALD1-209ENST00000436461 SAV1Q9H4B6 383 aaPredicted RBP12.4□□□□□ -0.42
CALD1-209ENST00000436461 IGKV2-40A0A087WW87 121 aaPredicted RBP12.4□□□□□ -0.42
CALD1-209ENST00000436461 A0A1W2PRE2 83 aa12.4□□□□□ -0.42
CALD1-209ENST00000436461 IGKV2D-40P01614 121 aaPredicted RBP12.4□□□□□ -0.42
CALD1-209ENST00000436461 SLC25A5P05141 298 aaKnown RBP12.4□□□□□ -0.42
CALD1-209ENST00000436461 RPL35AP18077 110 aaKnown RBP12.4□□□□□ -0.42
CALD1-209ENST00000436461 CMC4P56277 68 aaPredicted RBP12.4□□□□□ -0.42
CALD1-209ENST00000436461 HAGHQ16775 308 aa12.4□□□□□ -0.42
CALD1-209ENST00000436461 LYPD6BQ8NI32 183 aa12.4□□□□□ -0.42
CALD1-209ENST00000436461 DEFA6Q01524 100 aa12.39□□□□□ -0.43
CALD1-209ENST00000436461 HIST1H1AQ02539 215 aaPredicted RBP12.39□□□□□ -0.43
CALD1-209ENST00000436461 FOXI2Q6ZQN5 318 aa12.39□□□□□ -0.43
CALD1-209ENST00000436461 OR8A1Q8NGG7 326 aa12.39□□□□□ -0.43
CALD1-209ENST00000436461 TUBA4BQ9H853 241 aa12.39□□□□□ -0.43
CALD1-209ENST00000436461 A0A0J9YX75 114 aa12.38□□□□□ -0.43
CALD1-209ENST00000436461 RBMY1BA6NDE4 496 aaKnown RBP12.38□□□□□ -0.43
CALD1-209ENST00000436461 RBMY1EA6NEQ0 496 aaKnown RBP12.38□□□□□ -0.43
CALD1-209ENST00000436461 RBMY1DP0C7P1 496 aaKnown RBP12.38□□□□□ -0.43
CALD1-209ENST00000436461 CNN1P51911 297 aaKnown RBP12.38□□□□□ -0.43
CALD1-209ENST00000436461 ERCC8Q13216 396 aa12.38□□□□□ -0.43
CALD1-209ENST00000436461 EBLN2Q6P2I7 272 aa12.38□□□□□ -0.43
CALD1-209ENST00000436461 ZNF767PQ75MW2 155 aa12.38□□□□□ -0.43
CALD1-209ENST00000436461 STHQ8IWL8 128 aa12.38□□□□□ -0.43
CALD1-209ENST00000436461 OR4B1Q8NGF8 309 aa12.38□□□□□ -0.43
CALD1-209ENST00000436461 CMTM2Q8TAZ6 248 aa12.38□□□□□ -0.43
CALD1-209ENST00000436461 MRPL53Q96EL3 112 aaKnown RBP12.38□□□□□ -0.43
CALD1-209ENST00000436461 ASCL2Q99929 193 aa12.38□□□□□ -0.43
CALD1-209ENST00000436461 CLEC5AQ9NY25 188 aa12.38□□□□□ -0.43
CALD1-209ENST00000436461 PRELID1Q9Y255 219 aa12.38□□□□□ -0.43
CALD1-209ENST00000436461 DIRC3C9JPN6 131 aa12.37□□□□□ -0.43
CALD1-209ENST00000436461 H3BMM0 161 aa12.37□□□□□ -0.43
CALD1-209ENST00000436461 HLA-DRB4P13762 266 aa12.37□□□□□ -0.43
CALD1-209ENST00000436461 DEFB121Q5J5C9 76 aa12.37□□□□□ -0.43
CALD1-209ENST00000436461 SGK494Q96LW2 274 aa12.37□□□□□ -0.43
CALD1-209ENST00000436461 RARRES2Q99969 163 aa12.37□□□□□ -0.43
CALD1-209ENST00000436461 HLA-DRB4X5D2U9 266 aa12.37□□□□□ -0.43
CALD1-209ENST00000436461 CSN1S1P47710 185 aa12.37□□□□□ -0.43
CALD1-209ENST00000436461 GOLT1AQ6ZVE7 132 aa12.37□□□□□ -0.43
CALD1-209ENST00000436461 C5orf17Q8NAS9 161 aa12.37□□□□□ -0.43
CALD1-209ENST00000436461 VGLL1Q99990 258 aa12.37□□□□□ -0.43
CALD1-209ENST00000436461 MANBALQ9NQG1 85 aa12.37□□□□□ -0.43
CALD1-209ENST00000436461 PRKDCP78527 4128 aaKnown RBP12.36□□□□□ -0.43
CALD1-209ENST00000436461 TRAV8-1A0A0A6YYK1 113 aa12.36□□□□□ -0.43
CALD1-209ENST00000436461 C11orf94C9JXX5 98 aa12.36□□□□□ -0.43
CALD1-209ENST00000436461 PPT1P50897 306 aa12.36□□□□□ -0.43
CALD1-209ENST00000436461 FXYD7P58549 80 aa12.36□□□□□ -0.43
CALD1-209ENST00000436461 TRPT1Q86TN4 253 aaKnown RBP12.36□□□□□ -0.43
CALD1-209ENST00000436461 CCDC28AQ8IWP9 274 aa12.36□□□□□ -0.43
CALD1-209ENST00000436461 MRAPQ8TCY5 172 aa12.36□□□□□ -0.43
CALD1-209ENST00000436461 EPDR1Q9UM22 224 aa12.36□□□□□ -0.43
CALD1-209ENST00000436461 MEGF8Q7Z7M0 2845 aa12.36□□□□□ -0.43
CALD1-209ENST00000436461 TCRAP04437 139 aa12.35□□□□□ -0.43
CALD1-209ENST00000436461 FRMD6-AS1P0C7T7 363 aa12.35□□□□□ -0.43
CALD1-209ENST00000436461 BCL2P10415 239 aa12.35□□□□□ -0.43
CALD1-209ENST00000436461 OR10J6PQ8NGY7 276 aa12.35□□□□□ -0.43
CALD1-209ENST00000436461 RXFP4Q8TDU9 374 aa12.35□□□□□ -0.43
CALD1-209ENST00000436461 LINC00479Q96M42 142 aa12.35□□□□□ -0.43
CALD1-209ENST00000436461 SLC35B3Q9H1N7 401 aa12.35□□□□□ -0.43
CALD1-209ENST00000436461 ARL2-SNX15V9GYD0 113 aa12.35□□□□□ -0.43
CALD1-209ENST00000436461 DNAH9Q9NYC9 4486 aa12.35□□□□□ -0.43
CALD1-209ENST00000436461 LOC102723971A0A1B0GUV8 181 aa12.34□□□□□ -0.43
CALD1-209ENST00000436461 SCO2A0A1W2PP80 73 aa12.34□□□□□ -0.43
CALD1-209ENST00000436461 IFNA1P01562 189 aa12.34□□□□□ -0.43
CALD1-209ENST00000436461 RAB14P61106 215 aa12.34□□□□□ -0.43
CALD1-209ENST00000436461 TOR2AQ5JU69 321 aa12.34□□□□□ -0.43
CALD1-209ENST00000436461 Q8TAT8 98 aa12.34□□□□□ -0.43
CALD1-209ENST00000436461 AGPAT4-IT1Q9H0P7 198 aa12.34□□□□□ -0.43
CALD1-209ENST00000436461 LOC102724200A0A096LPH7 203 aaPredicted RBP12.33□□□□□ -0.43
CALD1-209ENST00000436461 TRAV34A0A0B4J273 112 aa12.33□□□□□ -0.43
CALD1-209ENST00000436461 PEX7O00628 323 aa12.33□□□□□ -0.43
CALD1-209ENST00000436461 NKX6-2Q9C056 277 aaPredicted RBP12.33□□□□□ -0.43
CALD1-209ENST00000436461 RBFOX3A6NFN3 312 aa12.33□□□□□ -0.44
CALD1-209ENST00000436461 CT45A10P0DMU9 189 aa12.33□□□□□ -0.44
CALD1-209ENST00000436461 MEF2BQ02080 365 aaPredicted RBP12.33□□□□□ -0.44
CALD1-209ENST00000436461 CLLU1Q5K131 121 aa12.33□□□□□ -0.44
CALD1-209ENST00000436461 ATG101Q9BSB4 218 aa12.33□□□□□ -0.44
CALD1-209ENST00000436461 VAX2Q9UIW0 290 aa12.33□□□□□ -0.44
CALD1-209ENST00000436461 NPIPB6E9PJ23 425 aa12.32□□□□□ -0.44
CALD1-209ENST00000436461 J3KRW8 73 aa12.32□□□□□ -0.44
CALD1-209ENST00000436461 M0R2Z0 102 aa12.32□□□□□ -0.44
CALD1-209ENST00000436461 DUSP14O95147 198 aaKnown RBP12.32□□□□□ -0.44
CALD1-209ENST00000436461 PMS2P11Q13670 270 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms