RNA–Protein interactions for RNA: ENST00000435145.6

HLA-DQB2-231, Transcript of major histocompatibility complex, class II, DQ beta 2, human

BASIC

Gene HLA-DQB2, Length 2,026 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HLA-DQB2-231	ENST00000435145	ZNF124	Q15973	351 aa		12.5	□□□□□ -0.41
HLA-DQB2-231	ENST00000435145		U3KQK5	164 aa		12.5	□□□□□ -0.41
HLA-DQB2-231	ENST00000435145	TMEM189	A5PLL7	270 aa		12.49	□□□□□ -0.41
HLA-DQB2-231	ENST00000435145	EFNA4	P52798	201 aa		12.49	□□□□□ -0.41
HLA-DQB2-231	ENST00000435145	PET117	Q6UWS5	81 aa		12.49	□□□□□ -0.41
HLA-DQB2-231	ENST00000435145	STPG4	Q8N801	248 aa		12.49	□□□□□ -0.41
HLA-DQB2-231	ENST00000435145	ST20	Q9HBF5	79 aa		12.49	□□□□□ -0.41
HLA-DQB2-231	ENST00000435145	S100A7	P31151	101 aa		12.49	□□□□□ -0.41
HLA-DQB2-231	ENST00000435145	LYZL1	Q6UWQ5	148 aa		12.49	□□□□□ -0.41
HLA-DQB2-231	ENST00000435145	PSMG3-AS1	Q96PY0	264 aa		12.49	□□□□□ -0.41
HLA-DQB2-231	ENST00000435145	ZFAND3	Q9H8U3	227 aa		12.49	□□□□□ -0.41
HLA-DQB2-231	ENST00000435145	LMO4	P61968	165 aa		12.48	□□□□□ -0.41
HLA-DQB2-231	ENST00000435145	REL	Q04864	619 aa	Predicted RBP	12.48	□□□□□ -0.41
HLA-DQB2-231	ENST00000435145	HSPB8	Q9UJY1	196 aa		12.48	□□□□□ -0.41
HLA-DQB2-231	ENST00000435145		A0A087X0K7	114 aa		12.47	□□□□□ -0.41
HLA-DQB2-231	ENST00000435145	TFPI2	P48307	235 aa		12.47	□□□□□ -0.41
HLA-DQB2-231	ENST00000435145	SRSF2	Q01130	221 aa	Known RBP	12.47	□□□□□ -0.41
HLA-DQB2-231	ENST00000435145	MAP1LC3C	Q9BXW4	147 aa		12.47	□□□□□ -0.41
HLA-DQB2-231	ENST00000435145	TMEM191A	Q9H0A3	160 aa		12.47	□□□□□ -0.41
HLA-DQB2-231	ENST00000435145	AP5S1	Q9NUS5	200 aa		12.47	□□□□□ -0.41
HLA-DQB2-231	ENST00000435145	ATRX	P46100	2492 aa		12.47	□□□□□ -0.41
HLA-DQB2-231	ENST00000435145	RPS20	P60866	119 aa	Known RBP	12.47	□□□□□ -0.41
HLA-DQB2-231	ENST00000435145	C15orf32	Q32M92	178 aa		12.47	□□□□□ -0.41
HLA-DQB2-231	ENST00000435145	FAM104B	Q5XKR9	115 aa		12.47	□□□□□ -0.41
HLA-DQB2-231	ENST00000435145	ZNF575	Q86XF7	245 aa		12.47	□□□□□ -0.41
HLA-DQB2-231	ENST00000435145	VGLL1	Q99990	258 aa		12.47	□□□□□ -0.41
HLA-DQB2-231	ENST00000435145	ATP6V0E1	O15342	81 aa		12.46	□□□□□ -0.41
HLA-DQB2-231	ENST00000435145	CSN3	P07498	182 aa		12.46	□□□□□ -0.41
HLA-DQB2-231	ENST00000435145	SAA4	P35542	130 aa		12.46	□□□□□ -0.41
HLA-DQB2-231	ENST00000435145	LINC01545	Q5VT33	79 aa		12.46	□□□□□ -0.41
HLA-DQB2-231	ENST00000435145	UNQ5815/PRO19632	Q6UWF5	114 aa		12.46	□□□□□ -0.41
HLA-DQB2-231	ENST00000435145	TPPP3	Q9BW30	176 aa		12.46	□□□□□ -0.41
HLA-DQB2-231	ENST00000435145	NBAS	A2RRP1	2371 aa		12.46	□□□□□ -0.42
HLA-DQB2-231	ENST00000435145	TMEM213	A2RRL7	107 aa		12.45	□□□□□ -0.42
HLA-DQB2-231	ENST00000435145	IGLC6	P0CF74	106 aa		12.45	□□□□□ -0.42
HLA-DQB2-231	ENST00000435145	GPR183	P32249	361 aa		12.45	□□□□□ -0.42
HLA-DQB2-231	ENST00000435145	RAB9A	P51151	201 aa		12.45	□□□□□ -0.42
HLA-DQB2-231	ENST00000435145	ZNF80	P51504	273 aa	Predicted RBP	12.45	□□□□□ -0.42
HLA-DQB2-231	ENST00000435145	RHOG	P84095	191 aa		12.45	□□□□□ -0.42
HLA-DQB2-231	ENST00000435145	UBTD1	Q9HAC8	227 aa		12.45	□□□□□ -0.42
HLA-DQB2-231	ENST00000435145	BUB3	O43684	328 aa		12.45	□□□□□ -0.42
HLA-DQB2-231	ENST00000435145	HLA-DMB	P28068	263 aa		12.45	□□□□□ -0.42
HLA-DQB2-231	ENST00000435145	BMI1	P35226	326 aa		12.45	□□□□□ -0.42
HLA-DQB2-231	ENST00000435145		Q8TAT8	98 aa		12.45	□□□□□ -0.42
HLA-DQB2-231	ENST00000435145	ZNF747	Q9BV97	191 aa		12.45	□□□□□ -0.42
HLA-DQB2-231	ENST00000435145	RELN	P78509	3460 aa		12.44	□□□□□ -0.42
HLA-DQB2-231	ENST00000435145	NCOR2	Q9Y618	2525 aa		12.44	□□□□□ -0.42
HLA-DQB2-231	ENST00000435145	TMSB15B	A0A087X1C1	80 aa		12.44	□□□□□ -0.42
HLA-DQB2-231	ENST00000435145	CENPVL3	A0A0U1RRI6	287 aa		12.44	□□□□□ -0.42
HLA-DQB2-231	ENST00000435145	CLPSL1	A2RUU4	121 aa		12.44	□□□□□ -0.42
HLA-DQB2-231	ENST00000435145	CCDC140	Q96MF4	163 aa		12.44	□□□□□ -0.42
HLA-DQB2-231	ENST00000435145	GOLT1B	Q9Y3E0	138 aa		12.44	□□□□□ -0.42
HLA-DQB2-231	ENST00000435145	NPS	P0C0P6	89 aa		12.44	□□□□□ -0.42
HLA-DQB2-231	ENST00000435145	ECSCR	Q19T08	205 aa		12.44	□□□□□ -0.42
HLA-DQB2-231	ENST00000435145	IGFL4	Q6B9Z1	124 aa		12.44	□□□□□ -0.42
HLA-DQB2-231	ENST00000435145	FA2H	Q7L5A8	372 aa		12.44	□□□□□ -0.42
HLA-DQB2-231	ENST00000435145	OR10AG1	Q8NH19	301 aa		12.44	□□□□□ -0.42
HLA-DQB2-231	ENST00000435145	CNFN	Q9BYD5	112 aa		12.44	□□□□□ -0.42
HLA-DQB2-231	ENST00000435145	BPESC1	Q9GZL8	116 aa		12.44	□□□□□ -0.42
HLA-DQB2-231	ENST00000435145		A0A096LNJ9	63 aa		12.43	□□□□□ -0.42
HLA-DQB2-231	ENST00000435145	hDV102S1	A0JD36	115 aa		12.43	□□□□□ -0.42
HLA-DQB2-231	ENST00000435145	RBAKDN	A6NC62	111 aa		12.43	□□□□□ -0.42
HLA-DQB2-231	ENST00000435145		D6R8Y8	96 aa		12.43	□□□□□ -0.42
HLA-DQB2-231	ENST00000435145	CLEC3B	P05452	202 aa		12.43	□□□□□ -0.42
HLA-DQB2-231	ENST00000435145	AMN1	Q8IY45	258 aa		12.43	□□□□□ -0.42
HLA-DQB2-231	ENST00000435145	PIP4P2	Q8N4L2	257 aa		12.43	□□□□□ -0.42
HLA-DQB2-231	ENST00000435145	PRSS3P2	Q8NHM4	247 aa		12.43	□□□□□ -0.42
HLA-DQB2-231	ENST00000435145	ITLN2	Q8WWU7	325 aa	Predicted RBP	12.43	□□□□□ -0.42
HLA-DQB2-231	ENST00000435145	IGHV3OR16-8	A0A075B7F1	116 aa		12.42	□□□□□ -0.42
HLA-DQB2-231	ENST00000435145	NPFF	O15130	113 aa		12.42	□□□□□ -0.42
HLA-DQB2-231	ENST00000435145	MRPL51	Q4U2R6	128 aa	Known RBP	12.42	□□□□□ -0.42
HLA-DQB2-231	ENST00000435145	UNQ5830/PRO19650/PRO19816	Q6UY13	95 aa		12.42	□□□□□ -0.42
HLA-DQB2-231	ENST00000435145	ORMDL3	Q8N138	153 aa		12.42	□□□□□ -0.42
HLA-DQB2-231	ENST00000435145	FER1L6-AS1	Q8NA97	138 aa		12.42	□□□□□ -0.42
HLA-DQB2-231	ENST00000435145	PRELID3A	Q96N28	172 aa		12.42	□□□□□ -0.42
HLA-DQB2-231	ENST00000435145	MS4A6A	Q9H2W1	248 aa		12.42	□□□□□ -0.42
HLA-DQB2-231	ENST00000435145	SIGLEC8	Q9NYZ4	499 aa		12.42	□□□□□ -0.42
HLA-DQB2-231	ENST00000435145	IGHV3-35	A0A0C4DH35	117 aa		12.42	□□□□□ -0.42
HLA-DQB2-231	ENST00000435145	IFI27	P40305	119 aa	Predicted RBP	12.42	□□□□□ -0.42
HLA-DQB2-231	ENST00000435145	HINT1	P49773	126 aa	Predicted RBP	12.42	□□□□□ -0.42
HLA-DQB2-231	ENST00000435145	CHD8	Q9HCK8	2581 aa		12.41	□□□□□ -0.42
HLA-DQB2-231	ENST00000435145	LINC01548	A6NM66	108 aa		12.41	□□□□□ -0.42
HLA-DQB2-231	ENST00000435145	GOSR1	O95249	250 aa		12.41	□□□□□ -0.42
HLA-DQB2-231	ENST00000435145	PAX8	Q06710	450 aa		12.41	□□□□□ -0.42
HLA-DQB2-231	ENST00000435145	C5orf56	Q8N8D9	126 aa		12.41	□□□□□ -0.42
HLA-DQB2-231	ENST00000435145	SLC50A1	Q9BRV3	221 aa		12.41	□□□□□ -0.42
HLA-DQB2-231	ENST00000435145	SCRT2	Q9NQ03	307 aa		12.41	□□□□□ -0.42
HLA-DQB2-231	ENST00000435145		G3V318	75 aa		12.4	□□□□□ -0.42
HLA-DQB2-231	ENST00000435145	LY6D	Q14210	128 aa		12.4	□□□□□ -0.42
HLA-DQB2-231	ENST00000435145	FAM106A	Q4KMX7	169 aa		12.4	□□□□□ -0.42
HLA-DQB2-231	ENST00000435145	ORAOV1	Q8WV07	137 aa		12.4	□□□□□ -0.42
HLA-DQB2-231	ENST00000435145	TRBV7-1	A0A0A6YYK4	115 aa		12.4	□□□□□ -0.42
HLA-DQB2-231	ENST00000435145	HSBP1L1	C9JCN9	74 aa		12.4	□□□□□ -0.42
HLA-DQB2-231	ENST00000435145	PRAC2	D3DTV9	90 aa		12.4	□□□□□ -0.42
HLA-DQB2-231	ENST00000435145	SFTPC	P11686	197 aa		12.4	□□□□□ -0.42
HLA-DQB2-231	ENST00000435145	LOXL1	Q08397	574 aa	Predicted RBP	12.4	□□□□□ -0.42
HLA-DQB2-231	ENST00000435145	C19orf54	Q5BKX5	351 aa		12.4	□□□□□ -0.42
HLA-DQB2-231	ENST00000435145	EEF1AKMT3	Q96AZ1	226 aa		12.4	□□□□□ -0.42
HLA-DQB2-231	ENST00000435145	ATP6V0B	Q99437	205 aa		12.4	□□□□□ -0.42
HLA-DQB2-231	ENST00000435145		U3KQE9	123 aa		12.4	□□□□□ -0.42

Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms