RNA–Protein interactions for RNA: ENST00000429940.6

LINC00839-202, long intergenic non-protein coding RNA 839, humanhuman

TSL 2 BASIC

Gene LINC00839, Length 2,253 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00839-202ENST00000429940 SIGLEC8Q9NYZ4 499 aa11.81□□□□□ -0.52
LINC00839-202ENST00000429940 TMEM213A2RRL7 107 aa11.8□□□□□ -0.52
LINC00839-202ENST00000429940 TMEM189A5PLL7 270 aa11.8□□□□□ -0.52
LINC00839-202ENST00000429940 PEF1Q9UBV8 284 aaKnown RBP11.8□□□□□ -0.52
LINC00839-202ENST00000429940 S4R3C0 116 aa11.8□□□□□ -0.52
LINC00839-202ENST00000429940 HIVEP3Q5T1R4 2406 aa11.8□□□□□ -0.52
LINC00839-202ENST00000429940 FLNCQ14315 2725 aa11.8□□□□□ -0.52
LINC00839-202ENST00000429940 WI2-2373I1.2A0A1W2PRP0 233 aa11.8□□□□□ -0.52
LINC00839-202ENST00000429940 LY6LH3BQJ8 138 aa11.8□□□□□ -0.52
LINC00839-202ENST00000429940 TIMM23O14925 209 aa11.8□□□□□ -0.52
LINC00839-202ENST00000429940 AMN1Q8IY45 258 aa11.8□□□□□ -0.52
LINC00839-202ENST00000429940 PRELID3AQ96N28 172 aa11.8□□□□□ -0.52
LINC00839-202ENST00000429940 TRAV8-6A0A0B4J262 113 aa11.79□□□□□ -0.52
LINC00839-202ENST00000429940 C7orf71A4D174 169 aa11.79□□□□□ -0.52
LINC00839-202ENST00000429940 APOBEC3AP31941 199 aaPredicted RBP11.79□□□□□ -0.52
LINC00839-202ENST00000429940 TMEM97Q5BJF2 176 aa11.79□□□□□ -0.52
LINC00839-202ENST00000429940 KLF17Q5JT82 389 aaPredicted RBP11.79□□□□□ -0.52
LINC00839-202ENST00000429940 FAM104BQ5XKR9 115 aa11.79□□□□□ -0.52
LINC00839-202ENST00000429940 BCL6BQ8N143 479 aaPredicted RBP11.79□□□□□ -0.52
LINC00839-202ENST00000429940 U3KQK5 164 aa11.79□□□□□ -0.52
LINC00839-202ENST00000429940 PKDREJQ9NTG1 2253 aa11.79□□□□□ -0.52
LINC00839-202ENST00000429940 GNG7O60262 68 aa11.79□□□□□ -0.52
LINC00839-202ENST00000429940 SH2D1AO60880 128 aa11.79□□□□□ -0.52
LINC00839-202ENST00000429940 ANKRD39Q53RE8 183 aa11.79□□□□□ -0.52
LINC00839-202ENST00000429940 ORMDL3Q8N138 153 aa11.79□□□□□ -0.52
LINC00839-202ENST00000429940 DPF1Q92782 380 aa11.79□□□□□ -0.52
LINC00839-202ENST00000429940 ONECUT1Q9UBC0 465 aa11.79□□□□□ -0.52
LINC00839-202ENST00000429940 SPTBN1Q01082 2364 aaKnown RBP11.78□□□□□ -0.52
LINC00839-202ENST00000429940 B9A039 149 aa11.78□□□□□ -0.52
LINC00839-202ENST00000429940 FGF6P10767 208 aa11.78□□□□□ -0.52
LINC00839-202ENST00000429940 SEC11AP67812 179 aa11.78□□□□□ -0.52
LINC00839-202ENST00000429940 PDE6HQ13956 83 aa11.78□□□□□ -0.52
LINC00839-202ENST00000429940 OCIAD2Q56VL3 154 aa11.78□□□□□ -0.52
LINC00839-202ENST00000429940 S100A7AQ86SG5 101 aa11.78□□□□□ -0.52
LINC00839-202ENST00000429940 RAB1BQ9H0U4 201 aa11.78□□□□□ -0.52
LINC00839-202ENST00000429940 NBR2O15453 112 aa11.77□□□□□ -0.52
LINC00839-202ENST00000429940 PIP4P2Q8N4L2 257 aa11.77□□□□□ -0.52
LINC00839-202ENST00000429940 PPBPP02775 128 aa11.77□□□□□ -0.53
LINC00839-202ENST00000429940 LGALS9BQ3B8N2 356 aa11.77□□□□□ -0.53
LINC00839-202ENST00000429940 MRPL51Q4U2R6 128 aaKnown RBP11.77□□□□□ -0.53
LINC00839-202ENST00000429940 LGALS9CQ6DKI2 356 aa11.77□□□□□ -0.53
LINC00839-202ENST00000429940 UQCRFS1P47985 274 aa11.76□□□□□ -0.53
LINC00839-202ENST00000429940 FXYD7P58549 80 aa11.76□□□□□ -0.53
LINC00839-202ENST00000429940 CACNG7P62955 275 aa11.76□□□□□ -0.53
LINC00839-202ENST00000429940 OR1N2Q8NGR9 330 aa11.76□□□□□ -0.53
LINC00839-202ENST00000429940 RABAC1Q9UI14 185 aa11.76□□□□□ -0.53
LINC00839-202ENST00000429940 HILPDAQ9Y5L2 63 aa11.76□□□□□ -0.53
LINC00839-202ENST00000429940 ABCA1O95477 2261 aa11.76□□□□□ -0.53
LINC00839-202ENST00000429940 UTP20O75691 2785 aaKnown RBP11.76□□□□□ -0.53
LINC00839-202ENST00000429940 IGKV2-40A0A087WW87 121 aaPredicted RBP11.76□□□□□ -0.53
LINC00839-202ENST00000429940 A0A1W2PRD5 423 aa11.76□□□□□ -0.53
LINC00839-202ENST00000429940 A0A1W2PRF3 423 aa11.76□□□□□ -0.53
LINC00839-202ENST00000429940 A0A1W2PRM7 423 aa11.76□□□□□ -0.53
LINC00839-202ENST00000429940 GAGE12BA1L429 117 aa11.76□□□□□ -0.53
LINC00839-202ENST00000429940 IGKV2D-40P01614 121 aaPredicted RBP11.76□□□□□ -0.53
LINC00839-202ENST00000429940 VPS25Q9BRG1 176 aa11.76□□□□□ -0.53
LINC00839-202ENST00000429940 HBDP02042 147 aa11.75□□□□□ -0.53
LINC00839-202ENST00000429940 CD3EP07766 207 aa11.75□□□□□ -0.53
LINC00839-202ENST00000429940 TCTAP57738 103 aa11.75□□□□□ -0.53
LINC00839-202ENST00000429940 COTL1Q14019 142 aa11.75□□□□□ -0.53
LINC00839-202ENST00000429940 IGFBPL1Q8WX77 278 aa11.75□□□□□ -0.53
LINC00839-202ENST00000429940 MFAP4P55083 255 aa11.75□□□□□ -0.53
LINC00839-202ENST00000429940 BOD1L2Q8IYS8 172 aa11.75□□□□□ -0.53
LINC00839-202ENST00000429940 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.74□□□□□ -0.53
LINC00839-202ENST00000429940 CCL21O00585 134 aa11.74□□□□□ -0.53
LINC00839-202ENST00000429940 PRB1P04280 392 aa11.74□□□□□ -0.53
LINC00839-202ENST00000429940 CKS2P33552 79 aa11.74□□□□□ -0.53
LINC00839-202ENST00000429940 CDSNQ15517 529 aa11.74□□□□□ -0.53
LINC00839-202ENST00000429940 DCHS2Q6V1P9 2916 aa11.74□□□□□ -0.53
LINC00839-202ENST00000429940 A6NDN8 102 aa11.74□□□□□ -0.53
LINC00839-202ENST00000429940 SMKR1H3BMG3 65 aa11.74□□□□□ -0.53
LINC00839-202ENST00000429940 EGR2P11161 476 aaPredicted RBP11.74□□□□□ -0.53
LINC00839-202ENST00000429940 PAX8Q06710 450 aa11.74□□□□□ -0.53
LINC00839-202ENST00000429940 TWIST1Q15672 202 aa11.74□□□□□ -0.53
LINC00839-202ENST00000429940 NPBQ8NG41 125 aa11.74□□□□□ -0.53
LINC00839-202ENST00000429940 CFHR4Q92496 578 aa11.74□□□□□ -0.53
LINC00839-202ENST00000429940 FANCD2OSQ96PS1 177 aa11.74□□□□□ -0.53
LINC00839-202ENST00000429940 PRR25Q96S07 402 aa11.74□□□□□ -0.53
LINC00839-202ENST00000429940 THYN1Q9P016 225 aa11.74□□□□□ -0.53
LINC00839-202ENST00000429940 DPM3Q9P2X0 92 aa11.74□□□□□ -0.53
LINC00839-202ENST00000429940 IGLV11-55A0A075B6I3 123 aa11.73□□□□□ -0.53
LINC00839-202ENST00000429940 GAGE10A6NGK3 116 aa11.73□□□□□ -0.53
LINC00839-202ENST00000429940 SMAD7O15105 426 aaKnown RBP11.73□□□□□ -0.53
LINC00839-202ENST00000429940 NDUFA3O95167 84 aa11.73□□□□□ -0.53
LINC00839-202ENST00000429940 NPYP01303 97 aa11.73□□□□□ -0.53
LINC00839-202ENST00000429940 HES1Q14469 280 aa11.73□□□□□ -0.53
LINC00839-202ENST00000429940 FER1L6-AS1Q8NA97 138 aa11.73□□□□□ -0.53
LINC00839-202ENST00000429940 IFI27L1Q96BM0 104 aa11.73□□□□□ -0.53
LINC00839-202ENST00000429940 AP1S3Q96PC3 154 aa11.73□□□□□ -0.53
LINC00839-202ENST00000429940 CHD6Q8TD26 2715 aa11.73□□□□□ -0.53
LINC00839-202ENST00000429940 COX8CQ7Z4L0 72 aa11.72□□□□□ -0.53
LINC00839-202ENST00000429940 Q8TAT8 98 aa11.72□□□□□ -0.53
LINC00839-202ENST00000429940 ZNF48Q96MX3 618 aaPredicted RBP11.72□□□□□ -0.53
LINC00839-202ENST00000429940 BBC3Q96PG8 261 aaPredicted RBP11.72□□□□□ -0.53
LINC00839-202ENST00000429940 VKORC1Q9BQB6 163 aa11.72□□□□□ -0.53
LINC00839-202ENST00000429940 TACC2O95359 2948 aa11.72□□□□□ -0.53
LINC00839-202ENST00000429940 A1L4Q6 167 aa11.72□□□□□ -0.53
LINC00839-202ENST00000429940 F8W735 103 aaPredicted RBP11.72□□□□□ -0.53
LINC00839-202ENST00000429940 H3BRM9 83 aa11.72□□□□□ -0.53
LINC00839-202ENST00000429940 RPL7P18124 248 aaKnown RBP11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms