RNA–Protein interactions for RNA: ENST00000429896.6

PTCH1-207, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 6,563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-207ENST00000429896 EXOC3-AS1Q8N2X6 119 aa10.28□□□□□ -0.76
PTCH1-207ENST00000429896 SPCS1Q9Y6A9 102 aa10.28□□□□□ -0.76
PTCH1-207ENST00000429896 TRBV9A0A0B4J1U6 114 aa10.28□□□□□ -0.76
PTCH1-207ENST00000429896 H3BUA1 57 aa10.28□□□□□ -0.76
PTCH1-207ENST00000429896 CITED2Q99967 270 aaPredicted RBP10.28□□□□□ -0.76
PTCH1-207ENST00000429896 OTORQ9NRC9 128 aa10.28□□□□□ -0.76
PTCH1-207ENST00000429896 CHTOPQ9Y3Y2 248 aaKnown RBP10.28□□□□□ -0.76
PTCH1-207ENST00000429896 ROS1P08922 2347 aa10.28□□□□□ -0.76
PTCH1-207ENST00000429896 IGFBPL1Q8WX77 278 aa10.28□□□□□ -0.76
PTCH1-207ENST00000429896 CKS1BP61024 79 aa10.28□□□□□ -0.76
PTCH1-207ENST00000429896 TMEM14EPQ6UXP3 125 aa10.28□□□□□ -0.76
PTCH1-207ENST00000429896 LINC00477Q96M19 166 aa10.28□□□□□ -0.76
PTCH1-207ENST00000429896 VSIRQ9H7M9 311 aa10.28□□□□□ -0.76
PTCH1-207ENST00000429896 Q6ZRM9 215 aa10.28□□□□□ -0.76
PTCH1-207ENST00000429896 RCHY1Q96PM5 261 aa10.28□□□□□ -0.76
PTCH1-207ENST00000429896 IZUMO1RA6ND01 250 aa10.27□□□□□ -0.76
PTCH1-207ENST00000429896 LYPD6Q86Y78 171 aa10.27□□□□□ -0.77
PTCH1-207ENST00000429896 ABCA4P78363 2273 aa10.27□□□□□ -0.77
PTCH1-207ENST00000429896 SLC25A39Q9BZJ4 359 aaPredicted RBP10.27□□□□□ -0.77
PTCH1-207ENST00000429896 SERF1AO75920 110 aa10.27□□□□□ -0.77
PTCH1-207ENST00000429896 TMEM86BQ8N661 226 aa10.27□□□□□ -0.77
PTCH1-207ENST00000429896 ACACBO00763 2458 aa10.27□□□□□ -0.77
PTCH1-207ENST00000429896 FAM208BQ5VWN6 2430 aa10.27□□□□□ -0.77
PTCH1-207ENST00000429896 FABP5P3A8MUU1 101 aa10.27□□□□□ -0.77
PTCH1-207ENST00000429896 FCN3O75636 299 aa10.27□□□□□ -0.77
PTCH1-207ENST00000429896 SPATA31B1PQ5VZV4 182 aa10.27□□□□□ -0.77
PTCH1-207ENST00000429896 NPBQ8NG41 125 aa10.27□□□□□ -0.77
PTCH1-207ENST00000429896 RHPN1-AS1Q9BWJ2 59 aa10.27□□□□□ -0.77
PTCH1-207ENST00000429896 OVOL1O14753 267 aa10.26□□□□□ -0.77
PTCH1-207ENST00000429896 POLEQ07864 2286 aa10.26□□□□□ -0.77
PTCH1-207ENST00000429896 PCNX1Q96RV3 2341 aa10.26□□□□□ -0.77
PTCH1-207ENST00000429896 CDK2AP2O75956 126 aa10.26□□□□□ -0.77
PTCH1-207ENST00000429896 TMEM158Q8WZ71 300 aa10.26□□□□□ -0.77
PTCH1-207ENST00000429896 C15orf62A8K5M9 175 aa10.26□□□□□ -0.77
PTCH1-207ENST00000429896 RNF182Q8N6D2 247 aa10.26□□□□□ -0.77
PTCH1-207ENST00000429896 DNAH12Q6ZR08 3092 aa10.26□□□□□ -0.77
PTCH1-207ENST00000429896 AGMATQ9BSE5 352 aa10.26□□□□□ -0.77
PTCH1-207ENST00000429896 DERL1Q9BUN8 251 aa10.26□□□□□ -0.77
PTCH1-207ENST00000429896 SCRT1Q9BWW7 348 aa10.26□□□□□ -0.77
PTCH1-207ENST00000429896 MEGF9Q9H1U4 602 aa10.26□□□□□ -0.77
PTCH1-207ENST00000429896 A0A1B0GW64 132 aa10.25□□□□□ -0.77
PTCH1-207ENST00000429896 INS-IGF2F8WCM5 200 aa10.25□□□□□ -0.77
PTCH1-207ENST00000429896 INSP01308 110 aa10.25□□□□□ -0.77
PTCH1-207ENST00000429896 MBD6Q96DN6 1003 aa10.25□□□□□ -0.77
PTCH1-207ENST00000429896 INAFM1C9JVW0 142 aa10.25□□□□□ -0.77
PTCH1-207ENST00000429896 BCL6BQ8N143 479 aaPredicted RBP10.25□□□□□ -0.77
PTCH1-207ENST00000429896 PSG8Q9UQ74 426 aa10.25□□□□□ -0.77
PTCH1-207ENST00000429896 SRRM4A7MD48 611 aaKnown RBP10.25□□□□□ -0.77
PTCH1-207ENST00000429896 A0A087WX48 190 aa10.25□□□□□ -0.77
PTCH1-207ENST00000429896 LY6G6DO95868 133 aa10.25□□□□□ -0.77
PTCH1-207ENST00000429896 LCN12Q6JVE5 192 aa10.25□□□□□ -0.77
PTCH1-207ENST00000429896 Q8TAT8 98 aa10.25□□□□□ -0.77
PTCH1-207ENST00000429896 RFNGQ9Y644 331 aa10.25□□□□□ -0.77
PTCH1-207ENST00000429896 SPTAN1Q13813 2472 aaKnown RBP10.25□□□□□ -0.77
PTCH1-207ENST00000429896 PMS2P5A8MQ11 134 aa10.24□□□□□ -0.77
PTCH1-207ENST00000429896 DEFB130BP0DP73 79 aa10.24□□□□□ -0.77
PTCH1-207ENST00000429896 DEFB130AP0DP74 79 aa10.24□□□□□ -0.77
PTCH1-207ENST00000429896 MBD3L1Q8WWY6 194 aa10.24□□□□□ -0.77
PTCH1-207ENST00000429896 GGTLC1Q9BX51 225 aa10.24□□□□□ -0.77
PTCH1-207ENST00000429896 EPDR1Q9UM22 224 aa10.24□□□□□ -0.77
PTCH1-207ENST00000429896 TNFRSF13BO14836 293 aaPredicted RBP10.24□□□□□ -0.77
PTCH1-207ENST00000429896 KRTAP10-9P60411 292 aa10.24□□□□□ -0.77
PTCH1-207ENST00000429896 LY6G5BQ8NDX9 201 aa10.24□□□□□ -0.77
PTCH1-207ENST00000429896 MGST2Q99735 147 aa10.24□□□□□ -0.77
PTCH1-207ENST00000429896 IGKV1-39P01597 117 aa10.24□□□□□ -0.77
PTCH1-207ENST00000429896 IGKV1D-39P04432 117 aa10.24□□□□□ -0.77
PTCH1-207ENST00000429896 TCRAP04437 139 aa10.24□□□□□ -0.77
PTCH1-207ENST00000429896 HIST1H4AP62805 103 aaKnown RBP10.24□□□□□ -0.77
PTCH1-207ENST00000429896 RPL23P62829 140 aaKnown RBP10.24□□□□□ -0.77
PTCH1-207ENST00000429896 FOXE3Q13461 319 aa10.24□□□□□ -0.77
PTCH1-207ENST00000429896 CIARTQ8N365 385 aaPredicted RBP10.24□□□□□ -0.77
PTCH1-207ENST00000429896 DNAJC9-AS1A6NH13 148 aa10.23□□□□□ -0.77
PTCH1-207ENST00000429896 FNDC10F2Z333 226 aa10.23□□□□□ -0.77
PTCH1-207ENST00000429896 POU2AF1Q16633 256 aa10.23□□□□□ -0.77
PTCH1-207ENST00000429896 HTTP42858 3142 aa10.23□□□□□ -0.77
PTCH1-207ENST00000429896 IGLV1-47P01700 117 aa10.23□□□□□ -0.77
PTCH1-207ENST00000429896 SRSF1Q07955 248 aaKnown RBP eCLIP10.23□□□□□ -0.77
PTCH1-207ENST00000429896 PAX4O43316 350 aa10.23□□□□□ -0.77
PTCH1-207ENST00000429896 ZNF48Q96MX3 618 aaPredicted RBP10.23□□□□□ -0.77
PTCH1-207ENST00000429896 DOCK7Q96N67 2140 aa10.23□□□□□ -0.77
PTCH1-207ENST00000429896 A0A087WWL8 130 aa10.23□□□□□ -0.77
PTCH1-207ENST00000429896 PCP4P48539 62 aa10.23□□□□□ -0.77
PTCH1-207ENST00000429896 MLANAQ16655 118 aa10.23□□□□□ -0.77
PTCH1-207ENST00000429896 PRADC1Q9BSG0 188 aa10.23□□□□□ -0.77
PTCH1-207ENST00000429896 RTTNQ86VV8 2226 aa10.23□□□□□ -0.77
PTCH1-207ENST00000429896 JPT2Q9H910 190 aa10.23□□□□□ -0.77
PTCH1-207ENST00000429896 NRN1Q9NPD7 142 aa10.23□□□□□ -0.77
PTCH1-207ENST00000429896 BLCAPP62952 87 aa10.22□□□□□ -0.77
PTCH1-207ENST00000429896 IGHV3-16A0A0C4DH30 117 aa10.22□□□□□ -0.77
PTCH1-207ENST00000429896 C5orf56Q8N8D9 126 aa10.22□□□□□ -0.77
PTCH1-207ENST00000429896 SLC25A2Q9BXI2 301 aa10.22□□□□□ -0.77
PTCH1-207ENST00000429896 TRAV8-4A0A0B4J246 113 aa10.22□□□□□ -0.77
PTCH1-207ENST00000429896 SMKR1H3BMG3 65 aa10.22□□□□□ -0.77
PTCH1-207ENST00000429896 YPEL3P61236 119 aaPredicted RBP10.22□□□□□ -0.77
PTCH1-207ENST00000429896 WT1-ASQ06250 92 aa10.22□□□□□ -0.77
PTCH1-207ENST00000429896 ZNF876PQ49A33 203 aa10.22□□□□□ -0.77
PTCH1-207ENST00000429896 OR2K2Q8NGT1 345 aa10.22□□□□□ -0.77
PTCH1-207ENST00000429896 LAMTOR3Q9UHA4 124 aa10.22□□□□□ -0.77
PTCH1-207ENST00000429896 NDUFA4O00483 81 aa10.22□□□□□ -0.77
PTCH1-207ENST00000429896 ERCC8Q13216 396 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms