RNA–Protein interactions for RNA: ENST00000426246.2

USP42-203, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-203ENST00000426246 TMEM8BA6NDV4 472 aa10.58□□□□□ -0.72
USP42-203ENST00000426246 LDLRAD2Q5SZI1 272 aa10.58□□□□□ -0.72
USP42-203ENST00000426246 RNASE8Q8TDE3 154 aaKnown RBP10.58□□□□□ -0.72
USP42-203ENST00000426246 ZFP30Q9Y2G7 519 aa10.58□□□□□ -0.72
USP42-203ENST00000426246 CLEC3BP05452 202 aa10.57□□□□□ -0.72
USP42-203ENST00000426246 POU2AF1Q16633 256 aa10.57□□□□□ -0.72
USP42-203ENST00000426246 DNLZQ5SXM8 178 aa10.57□□□□□ -0.72
USP42-203ENST00000426246 FAM120AOSQ5T036 256 aa10.57□□□□□ -0.72
USP42-203ENST00000426246 Q86TA4 180 aa10.57□□□□□ -0.72
USP42-203ENST00000426246 TRAV9-1A0A075B6T8 112 aa10.57□□□□□ -0.72
USP42-203ENST00000426246 IGLC1P0CG04 106 aa10.57□□□□□ -0.72
USP42-203ENST00000426246 SRD5A1P18405 259 aa10.57□□□□□ -0.72
USP42-203ENST00000426246 RIGQ13278 110 aa10.57□□□□□ -0.72
USP42-203ENST00000426246 Q8N976 141 aa10.57□□□□□ -0.72
USP42-203ENST00000426246 MBD6Q96DN6 1003 aa10.57□□□□□ -0.72
USP42-203ENST00000426246 FLNCQ14315 2725 aa10.57□□□□□ -0.72
USP42-203ENST00000426246 IGKV1-17P01599 117 aa10.57□□□□□ -0.72
USP42-203ENST00000426246 GATA1P15976 413 aaPredicted RBP10.57□□□□□ -0.72
USP42-203ENST00000426246 TMEM249Q2WGJ8 235 aa10.57□□□□□ -0.72
USP42-203ENST00000426246 COX19Q49B96 90 aa10.57□□□□□ -0.72
USP42-203ENST00000426246 FBLN7Q53RD9 439 aa10.57□□□□□ -0.72
USP42-203ENST00000426246 LY96Q9Y6Y9 160 aa10.57□□□□□ -0.72
USP42-203ENST00000426246 C7orf71A4D174 169 aa10.56□□□□□ -0.72
USP42-203ENST00000426246 NDUFB8O95169 186 aa10.56□□□□□ -0.72
USP42-203ENST00000426246 LY6EQ16553 131 aa10.56□□□□□ -0.72
USP42-203ENST00000426246 LCNL1Q6ZST4 164 aa10.56□□□□□ -0.72
USP42-203ENST00000426246 PRELID3AQ96N28 172 aa10.56□□□□□ -0.72
USP42-203ENST00000426246 UTP20O75691 2785 aaKnown RBP10.56□□□□□ -0.72
USP42-203ENST00000426246 TNFRSF13BO14836 293 aaPredicted RBP10.56□□□□□ -0.72
USP42-203ENST00000426246 AARDQ4LEZ3 155 aa10.56□□□□□ -0.72
USP42-203ENST00000426246 CLEC19AQ6UXS0 136 aa10.56□□□□□ -0.72
USP42-203ENST00000426246 FMC1Q96HJ9 113 aa10.56□□□□□ -0.72
USP42-203ENST00000426246 DPM3Q9P2X0 92 aa10.56□□□□□ -0.72
USP42-203ENST00000426246 G3V318 75 aa10.55□□□□□ -0.72
USP42-203ENST00000426246 IGHV3-11P01762 117 aa10.55□□□□□ -0.72
USP42-203ENST00000426246 LIPFP07098 398 aa10.55□□□□□ -0.72
USP42-203ENST00000426246 FOXE3Q13461 319 aa10.55□□□□□ -0.72
USP42-203ENST00000426246 VGLL1Q99990 258 aa10.55□□□□□ -0.72
USP42-203ENST00000426246 GP9P14770 177 aa10.54□□□□□ -0.72
USP42-203ENST00000426246 CBY1Q9Y3M2 126 aa10.54□□□□□ -0.72
USP42-203ENST00000426246 LOC105371242A0A075B767 164 aa10.54□□□□□ -0.72
USP42-203ENST00000426246 PSMB11A5LHX3 300 aa10.54□□□□□ -0.72
USP42-203ENST00000426246 NBR2O15453 112 aa10.54□□□□□ -0.72
USP42-203ENST00000426246 NCOR1P1Q9H4R4 102 aa10.54□□□□□ -0.72
USP42-203ENST00000426246 C21orf62Q9NYP8 219 aa10.54□□□□□ -0.72
USP42-203ENST00000426246 IGKV3-20P01619 116 aa10.54□□□□□ -0.72
USP42-203ENST00000426246 GCSHP23434 173 aa10.54□□□□□ -0.72
USP42-203ENST00000426246 MTURNQ8N3F0 131 aa10.54□□□□□ -0.72
USP42-203ENST00000426246 TRAV26-2A0A0B4J265 109 aa10.53□□□□□ -0.72
USP42-203ENST00000426246 C2orf70A6NJV1 201 aa10.53□□□□□ -0.72
USP42-203ENST00000426246 TOMM40O96008 361 aa10.53□□□□□ -0.72
USP42-203ENST00000426246 HTN1P15515 57 aa10.53□□□□□ -0.72
USP42-203ENST00000426246 URB1-AS1Q96HZ7 61 aa10.53□□□□□ -0.72
USP42-203ENST00000426246 TRGV9Q99603 122 aa10.53□□□□□ -0.72
USP42-203ENST00000426246 OTORQ9NRC9 128 aa10.53□□□□□ -0.72
USP42-203ENST00000426246 B9A039 149 aa10.53□□□□□ -0.72
USP42-203ENST00000426246 ITGB1BP1O14713 200 aa10.53□□□□□ -0.72
USP42-203ENST00000426246 HSPB8Q9UJY1 196 aa10.53□□□□□ -0.72
USP42-203ENST00000426246 TRAV8-6A0A0B4J262 113 aa10.52□□□□□ -0.72
USP42-203ENST00000426246 H3BUT2 72 aa10.52□□□□□ -0.72
USP42-203ENST00000426246 MFAP4P55083 255 aa10.52□□□□□ -0.72
USP42-203ENST00000426246 BRD3OSQ6XYD6 125 aa10.52□□□□□ -0.72
USP42-203ENST00000426246 RAB1BQ9H0U4 201 aa10.52□□□□□ -0.72
USP42-203ENST00000426246 OR10AG1Q8NH19 301 aa10.52□□□□□ -0.73
USP42-203ENST00000426246 LINC00574Q9H8X3 128 aa10.52□□□□□ -0.73
USP42-203ENST00000426246 EPG5Q9HCE0 2579 aa10.52□□□□□ -0.73
USP42-203ENST00000426246 ZANQ9Y493 2812 aa10.52□□□□□ -0.73
USP42-203ENST00000426246 ACANP16112 2415 aa10.52□□□□□ -0.73
USP42-203ENST00000426246 K7EP13 123 aa10.52□□□□□ -0.73
USP42-203ENST00000426246 SH2D1AO60880 128 aa10.52□□□□□ -0.73
USP42-203ENST00000426246 GAS8-AS1O95177 125 aa10.52□□□□□ -0.73
USP42-203ENST00000426246 RPL24P83731 157 aaKnown RBP10.52□□□□□ -0.73
USP42-203ENST00000426246 ARPC1AQ92747 370 aa10.52□□□□□ -0.73
USP42-203ENST00000426246 TMEM160Q9NX00 188 aa10.52□□□□□ -0.73
USP42-203ENST00000426246 ZNF491Q8N8L2 437 aa10.51□□□□□ -0.73
USP42-203ENST00000426246 TRBV19A0A075B6N1 114 aa10.51□□□□□ -0.73
USP42-203ENST00000426246 TEX22C9J3V5 150 aa10.51□□□□□ -0.73
USP42-203ENST00000426246 M0R381 172 aa10.51□□□□□ -0.73
USP42-203ENST00000426246 RIPPLY3P57055 190 aa10.51□□□□□ -0.73
USP42-203ENST00000426246 Q6ZQT7 251 aa10.51□□□□□ -0.73
USP42-203ENST00000426246 COX11Q9Y6N1 276 aa10.51□□□□□ -0.73
USP42-203ENST00000426246 ARL3P36405 182 aa10.51□□□□□ -0.73
USP42-203ENST00000426246 CTRLP40313 264 aa10.51□□□□□ -0.73
USP42-203ENST00000426246 C15orf32Q32M92 178 aa10.51□□□□□ -0.73
USP42-203ENST00000426246 FN1P02751 2386 aaKnown RBP10.5□□□□□ -0.73
USP42-203ENST00000426246 K7EIM0 57 aa10.5□□□□□ -0.73
USP42-203ENST00000426246 S100A4P26447 101 aaKnown RBP10.5□□□□□ -0.73
USP42-203ENST00000426246 ITLN2Q8WWU7 325 aaPredicted RBP10.5□□□□□ -0.73
USP42-203ENST00000426246 MRPL27Q9P0M9 148 aaKnown RBP10.5□□□□□ -0.73
USP42-203ENST00000426246 CEACAM3P40198 252 aa10.5□□□□□ -0.73
USP42-203ENST00000426246 DYNAPQ8N1N2 210 aa10.5□□□□□ -0.73
USP42-203ENST00000426246 LTAP01374 205 aa10.5□□□□□ -0.73
USP42-203ENST00000426246 GNLYP22749 145 aa10.5□□□□□ -0.73
USP42-203ENST00000426246 SCGB2A2Q13296 93 aa10.5□□□□□ -0.73
USP42-203ENST00000426246 THAP8Q8NA92 274 aa10.5□□□□□ -0.73
USP42-203ENST00000426246 A0A1W2PPR1 153 aa10.49□□□□□ -0.73
USP42-203ENST00000426246 LINC01548A6NM66 108 aa10.49□□□□□ -0.73
USP42-203ENST00000426246 PRAC2D3DTV9 90 aa10.49□□□□□ -0.73
USP42-203ENST00000426246 FNDC10F2Z333 226 aa10.49□□□□□ -0.73
USP42-203ENST00000426246 MGPP08493 103 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms