RNA–Protein interactions for RNA: ENST00000420692.6

CTSB-203, Transcript of cathepsin B, humanhuman

TSL 2

Gene CTSB, Length 2,230 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-203ENST00000420692 RNF224P0DH78 156 aa12.51□□□□□ -0.41
CTSB-203ENST00000420692 CTRLP40313 264 aa12.51□□□□□ -0.41
CTSB-203ENST00000420692 LCN12Q6JVE5 192 aa12.51□□□□□ -0.41
CTSB-203ENST00000420692 A0A1B0GUT8 65 aa12.5□□□□□ -0.41
CTSB-203ENST00000420692 BUB3O43684 328 aa12.5□□□□□ -0.41
CTSB-203ENST00000420692 BRD3OSQ6XYD6 125 aa12.5□□□□□ -0.41
CTSB-203ENST00000420692 COX8CQ7Z4L0 72 aa12.5□□□□□ -0.41
CTSB-203ENST00000420692 NDFIP1Q9BT67 221 aa12.5□□□□□ -0.41
CTSB-203ENST00000420692 FAM181BA6NEQ2 426 aa12.5□□□□□ -0.41
CTSB-203ENST00000420692 C2orf70A6NJV1 201 aa12.5□□□□□ -0.41
CTSB-203ENST00000420692 PMCHL1Q16048 86 aa12.5□□□□□ -0.41
CTSB-203ENST00000420692 C19orf54Q5BKX5 351 aa12.5□□□□□ -0.41
CTSB-203ENST00000420692 CLEC19AQ6UXS0 136 aa12.5□□□□□ -0.41
CTSB-203ENST00000420692 SPATA12Q7Z6I5 190 aa12.5□□□□□ -0.41
CTSB-203ENST00000420692 C10orf105Q8TEF2 133 aa12.5□□□□□ -0.41
CTSB-203ENST00000420692 PSMG3-AS1Q96PY0 264 aa12.5□□□□□ -0.41
CTSB-203ENST00000420692 PRR25Q96S07 402 aa12.5□□□□□ -0.41
CTSB-203ENST00000420692 CSMD2Q7Z408 3487 aa12.5□□□□□ -0.41
CTSB-203ENST00000420692 IGHV1-69DA0A0B4J2H0 117 aa12.49□□□□□ -0.41
CTSB-203ENST00000420692 M0R2Z0 102 aa12.49□□□□□ -0.41
CTSB-203ENST00000420692 SH2D1AO60880 128 aa12.49□□□□□ -0.41
CTSB-203ENST00000420692 IGHV1-69P01742 117 aa12.49□□□□□ -0.41
CTSB-203ENST00000420692 CSN1S1P47710 185 aa12.49□□□□□ -0.41
CTSB-203ENST00000420692 ZNF80P51504 273 aaPredicted RBP12.49□□□□□ -0.41
CTSB-203ENST00000420692 GATD1Q8NB37 220 aa12.49□□□□□ -0.41
CTSB-203ENST00000420692 Q8TAT8 98 aa12.49□□□□□ -0.41
CTSB-203ENST00000420692 MIEN1Q9BRT3 115 aa12.49□□□□□ -0.41
CTSB-203ENST00000420692 ZMAT5Q9UDW3 170 aaKnown RBP12.49□□□□□ -0.41
CTSB-203ENST00000420692 PRAC2D3DTV9 90 aa12.49□□□□□ -0.41
CTSB-203ENST00000420692 ARL6IP6Q8N6S5 226 aa12.49□□□□□ -0.41
CTSB-203ENST00000420692 LINC00527Q9UJ94 153 aa12.49□□□□□ -0.41
CTSB-203ENST00000420692 IGHV3-66A0A0C4DH42 116 aa12.48□□□□□ -0.41
CTSB-203ENST00000420692 SERTM2A0A1B0GWG4 89 aa12.48□□□□□ -0.41
CTSB-203ENST00000420692 RAB4AP20338 218 aa12.48□□□□□ -0.41
CTSB-203ENST00000420692 ZNF138P52744 262 aa12.48□□□□□ -0.41
CTSB-203ENST00000420692 RELQ04864 619 aaPredicted RBP12.48□□□□□ -0.41
CTSB-203ENST00000420692 BORCS7Q96B45 105 aa12.48□□□□□ -0.41
CTSB-203ENST00000420692 CLEC5AQ9NY25 188 aa12.48□□□□□ -0.41
CTSB-203ENST00000420692 ZFYVE26Q68DK2 2539 aa12.48□□□□□ -0.41
CTSB-203ENST00000420692 TMSB15BA0A087X1C1 80 aa12.47□□□□□ -0.41
CTSB-203ENST00000420692 IGHV4-38-2P0DP08 117 aa12.47□□□□□ -0.41
CTSB-203ENST00000420692 LBHQ53QV2 105 aaPredicted RBP12.47□□□□□ -0.41
CTSB-203ENST00000420692 LINC00173Q6ZV60 143 aa12.47□□□□□ -0.41
CTSB-203ENST00000420692 LINC00469Q8N7U9 141 aa12.47□□□□□ -0.41
CTSB-203ENST00000420692 CCL19Q99731 98 aa12.47□□□□□ -0.41
CTSB-203ENST00000420692 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.47□□□□□ -0.41
CTSB-203ENST00000420692 SCGB2A1O75556 95 aa12.47□□□□□ -0.41
CTSB-203ENST00000420692 MAJINQ3KP22 176 aa12.47□□□□□ -0.41
CTSB-203ENST00000420692 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.47□□□□□ -0.41
CTSB-203ENST00000420692 IGHV3OR16-13A0A075B7E8 117 aa12.46□□□□□ -0.41
CTSB-203ENST00000420692 IGHV4-30-2A0A087WSY4 118 aa12.46□□□□□ -0.41
CTSB-203ENST00000420692 A0A087X0K7 114 aa12.46□□□□□ -0.41
CTSB-203ENST00000420692 IGHV3-74A0A0B4J1X5 117 aa12.46□□□□□ -0.41
CTSB-203ENST00000420692 TRAV40A0A0B4J280 105 aa12.46□□□□□ -0.41
CTSB-203ENST00000420692 CT45A10P0DMU9 189 aa12.46□□□□□ -0.41
CTSB-203ENST00000420692 ZNF705AQ6ZN79 300 aaPredicted RBP12.46□□□□□ -0.41
CTSB-203ENST00000420692 ATOH7Q8N100 152 aa12.46□□□□□ -0.41
CTSB-203ENST00000420692 PIMREGQ9BSJ6 248 aa12.46□□□□□ -0.41
CTSB-203ENST00000420692 MOB4Q9Y3A3 225 aa12.46□□□□□ -0.41
CTSB-203ENST00000420692 IGHV1-24A0A0C4DH33 117 aa12.46□□□□□ -0.42
CTSB-203ENST00000420692 RIGQ13278 110 aa12.46□□□□□ -0.42
CTSB-203ENST00000420692 FAM162BQ5T6X4 162 aa12.46□□□□□ -0.42
CTSB-203ENST00000420692 LYZL1Q6UWQ5 148 aa12.46□□□□□ -0.42
CTSB-203ENST00000420692 RNF182Q8N6D2 247 aa12.46□□□□□ -0.42
CTSB-203ENST00000420692 TPPP3Q9BW30 176 aa12.46□□□□□ -0.42
CTSB-203ENST00000420692 MEGF9Q9H1U4 602 aa12.46□□□□□ -0.42
CTSB-203ENST00000420692 IGHV3-49A0A0A0MS15 119 aa12.45□□□□□ -0.42
CTSB-203ENST00000420692 TMEM189A5PLL7 270 aa12.45□□□□□ -0.42
CTSB-203ENST00000420692 ZNF207O43670 478 aaKnown RBP12.45□□□□□ -0.42
CTSB-203ENST00000420692 ERCC8Q13216 396 aa12.45□□□□□ -0.42
CTSB-203ENST00000420692 SPATA45Q537H7 98 aa12.45□□□□□ -0.42
CTSB-203ENST00000420692 SAPCD1Q5SSQ6 148 aa12.45□□□□□ -0.42
CTSB-203ENST00000420692 EEF1AKMT3Q96AZ1 226 aa12.45□□□□□ -0.42
CTSB-203ENST00000420692 TRAV41A0A0B4J266 112 aa12.45□□□□□ -0.42
CTSB-203ENST00000420692 TMEM213A2RRL7 107 aa12.45□□□□□ -0.42
CTSB-203ENST00000420692 GOSR1O95249 250 aa12.45□□□□□ -0.42
CTSB-203ENST00000420692 LINC00614P0C842 121 aa12.45□□□□□ -0.42
CTSB-203ENST00000420692 CHCHD1Q96BP2 118 aaKnown RBP12.45□□□□□ -0.42
CTSB-203ENST00000420692 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.44□□□□□ -0.422e-6■■□□□ 14.1
CTSB-203ENST00000420692 USP24Q9UPU5 2620 aa12.44□□□□□ -0.42
CTSB-203ENST00000420692 CENPEQ02224 2701 aa12.44□□□□□ -0.42
CTSB-203ENST00000420692 TRBV7-1A0A0A6YYK4 115 aa12.44□□□□□ -0.42
CTSB-203ENST00000420692 CRIP2P52943 208 aaPredicted RBP12.44□□□□□ -0.42
CTSB-203ENST00000420692 U3KQE9 123 aa12.44□□□□□ -0.42
CTSB-203ENST00000420692 TRAV8-2A0A0B4J237 113 aa12.43□□□□□ -0.42
CTSB-203ENST00000420692 MUC21A0A0G2JKD1 596 aa12.43□□□□□ -0.42
CTSB-203ENST00000420692 MUC21A0A140T8X8 626 aa12.43□□□□□ -0.42
CTSB-203ENST00000420692 M0R143 59 aa12.43□□□□□ -0.42
CTSB-203ENST00000420692 BTF3P20290 206 aaKnown RBP12.43□□□□□ -0.42
CTSB-203ENST00000420692 SSTP61278 116 aa12.43□□□□□ -0.42
CTSB-203ENST00000420692 MUC21Q5SSG8 566 aa12.43□□□□□ -0.42
CTSB-203ENST00000420692 ZNF493Q6ZR52 646 aa12.43□□□□□ -0.42
CTSB-203ENST00000420692 CSPG4Q6UVK1 2322 aa12.43□□□□□ -0.42
CTSB-203ENST00000420692 ZANQ9Y493 2812 aa12.43□□□□□ -0.42
CTSB-203ENST00000420692 ATP5J2P56134 94 aa12.43□□□□□ -0.42
CTSB-203ENST00000420692 ATP5G2Q06055 141 aa12.43□□□□□ -0.42
CTSB-203ENST00000420692 Q6AWC8 147 aa12.43□□□□□ -0.42
CTSB-203ENST00000420692 FBN2P35556 2912 aa12.43□□□□□ -0.42
CTSB-203ENST00000420692 A0A1B0GW15 77 aa12.42□□□□□ -0.42
CTSB-203ENST00000420692 IGLC3P0DOY3 106 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 93.6 ms