RNA–Protein interactions for RNA: ENST00000420239.6

CHD2-202, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 1 (best) BASIC

Gene CHD2, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-202ENST00000420239 CARD19Q96LW7 228 aa4.8□□□□□ -1.64
CHD2-202ENST00000420239 FAM110AQ9BQ89 295 aa4.8□□□□□ -1.64
CHD2-202ENST00000420239 TPPP3Q9BW30 176 aa4.8□□□□□ -1.64
CHD2-202ENST00000420239 TMEM14CQ9P0S9 112 aa4.8□□□□□ -1.64
CHD2-202ENST00000420239 HLA-DRB4X5D2U9 266 aa4.8□□□□□ -1.64
CHD2-202ENST00000420239 PCNX2A6NKB5 2137 aa4.8□□□□□ -1.64
CHD2-202ENST00000420239 TRBV7-3A0A075B6L6 115 aa4.8□□□□□ -1.64
CHD2-202ENST00000420239 TRBV7-9A0A0J9YWB2 115 aa4.8□□□□□ -1.64
CHD2-202ENST00000420239 LINC01546A6NGU7 62 aa4.8□□□□□ -1.64
CHD2-202ENST00000420239 PLA2G1BP04054 148 aaKnown RBP4.8□□□□□ -1.64
CHD2-202ENST00000420239 HERV-K104P63124 156 aa4.8□□□□□ -1.64
CHD2-202ENST00000420239 WT1-ASQ06250 92 aa4.8□□□□□ -1.64
CHD2-202ENST00000420239 SRSF1Q07955 248 aaKnown RBP eCLIP4.8□□□□□ -1.641e-8■■□□□ 12.3
CHD2-202ENST00000420239 SRSF6Q13247 344 aaKnown RBP4.8□□□□□ -1.64
CHD2-202ENST00000420239 MORN3Q6PF18 240 aaPredicted RBP4.8□□□□□ -1.64
CHD2-202ENST00000420239 Q6ZT83 130 aa4.8□□□□□ -1.64
CHD2-202ENST00000420239 ORMDL3Q8N138 153 aa4.8□□□□□ -1.64
CHD2-202ENST00000420239 EXOC3-AS1Q8N2X6 119 aa4.8□□□□□ -1.64
CHD2-202ENST00000420239 MDS2Q8NDY4 140 aa4.8□□□□□ -1.64
CHD2-202ENST00000420239 OR10X1Q8NGY0 326 aa4.8□□□□□ -1.64
CHD2-202ENST00000420239 ANAPC13Q9BS18 74 aa4.8□□□□□ -1.64
CHD2-202ENST00000420239 RPUSD1Q9UJJ7 312 aaKnown RBP4.8□□□□□ -1.64
CHD2-202ENST00000420239 DSCAMO60469 2012 aa4.8□□□□□ -1.64
CHD2-202ENST00000420239 DNAJC13O75165 2243 aa4.79□□□□□ -1.64
CHD2-202ENST00000420239 B5MCH6 92 aa4.79□□□□□ -1.64
CHD2-202ENST00000420239 IGKCP01834 107 aa4.79□□□□□ -1.64
CHD2-202ENST00000420239 EVI2AP22794 236 aa4.79□□□□□ -1.64
CHD2-202ENST00000420239 GAGE5Q13069 117 aa4.79□□□□□ -1.64
CHD2-202ENST00000420239 GAGE6Q13070 117 aa4.79□□□□□ -1.64
CHD2-202ENST00000420239 LCNL1Q6ZST4 164 aa4.79□□□□□ -1.64
CHD2-202ENST00000420239 ZNRF1Q8ND25 227 aa4.79□□□□□ -1.64
CHD2-202ENST00000420239 C8orf46Q8TAG6 207 aa4.79□□□□□ -1.64
CHD2-202ENST00000420239 VKORC1Q9BQB6 163 aa4.79□□□□□ -1.64
CHD2-202ENST00000420239 ZNF71Q9NQZ8 489 aaPredicted RBP4.79□□□□□ -1.64
CHD2-202ENST00000420239 SPRR3Q9UBC9 169 aa4.79□□□□□ -1.64
CHD2-202ENST00000420239 CFAP54Q96N23 3096 aa4.79□□□□□ -1.64
CHD2-202ENST00000420239 TAL2Q16559 108 aa4.78□□□□□ -1.64
CHD2-202ENST00000420239 KLF17Q5JT82 389 aaPredicted RBP4.78□□□□□ -1.64
CHD2-202ENST00000420239 ZC2HC1BQ5TFG8 222 aa4.78□□□□□ -1.64
CHD2-202ENST00000420239 DUX4L9Q6RFH8 374 aaPredicted RBP4.78□□□□□ -1.64
CHD2-202ENST00000420239 LYZL1Q6UWQ5 148 aa4.78□□□□□ -1.64
CHD2-202ENST00000420239 Q6ZS92 163 aa4.78□□□□□ -1.64
CHD2-202ENST00000420239 PTH2Q96A98 100 aa4.78□□□□□ -1.64
CHD2-202ENST00000420239 UFC1Q9Y3C8 167 aa4.78□□□□□ -1.64
CHD2-202ENST00000420239 PRR14LQ5THK1 2151 aa4.78□□□□□ -1.64
CHD2-202ENST00000420239 LAMA1P25391 3075 aa4.78□□□□□ -1.64
CHD2-202ENST00000420239 LYZL6O75951 148 aa4.78□□□□□ -1.64
CHD2-202ENST00000420239 GAS8-AS1O95177 125 aa4.78□□□□□ -1.64
CHD2-202ENST00000420239 CECR9P0C854 216 aa4.78□□□□□ -1.64
CHD2-202ENST00000420239 CXCL12P48061 93 aa4.78□□□□□ -1.64
CHD2-202ENST00000420239 SPRNQ5BIV9 151 aa4.78□□□□□ -1.64
CHD2-202ENST00000420239 TMEM75Q8N9X5 138 aa4.78□□□□□ -1.64
CHD2-202ENST00000420239 TMEM158Q8WZ71 300 aa4.78□□□□□ -1.64
CHD2-202ENST00000420239 FOXC2Q99958 501 aa4.78□□□□□ -1.64
CHD2-202ENST00000420239 CITED1Q99966 193 aa4.78□□□□□ -1.64
CHD2-202ENST00000420239 TMSB15BA0A087X1C1 80 aa4.77□□□□□ -1.65
CHD2-202ENST00000420239 TRGV5A0A0B4J1U4 118 aa4.77□□□□□ -1.65
CHD2-202ENST00000420239 TMEM8BA6NDV4 472 aa4.77□□□□□ -1.65
CHD2-202ENST00000420239 DPM2O94777 84 aa4.77□□□□□ -1.65
CHD2-202ENST00000420239 IGLV2-23P01705 113 aa4.77□□□□□ -1.65
CHD2-202ENST00000420239 CCL11P51671 97 aa4.77□□□□□ -1.65
CHD2-202ENST00000420239 DIAPH2-AS1Q14236 149 aa4.77□□□□□ -1.65
CHD2-202ENST00000420239 MRGPRG-AS1Q2M3A8 158 aa4.77□□□□□ -1.65
CHD2-202ENST00000420239 PMS2CLQ68D20 193 aa4.77□□□□□ -1.65
CHD2-202ENST00000420239 COX8CQ7Z4L0 72 aa4.77□□□□□ -1.65
CHD2-202ENST00000420239 C8orf49Q96NF6 230 aa4.77□□□□□ -1.65
CHD2-202ENST00000420239 KIR2DL4Q99706 377 aa4.77□□□□□ -1.65
CHD2-202ENST00000420239 SRSF8Q9BRL6 282 aaKnown RBP4.77□□□□□ -1.65
CHD2-202ENST00000420239 MRPL20Q9BYC9 149 aaKnown RBP4.77□□□□□ -1.65
CHD2-202ENST00000420239 IGHV1-18A0A0C4DH31 117 aa4.77□□□□□ -1.65
CHD2-202ENST00000420239 LINC01619G3V211 115 aa4.77□□□□□ -1.65
CHD2-202ENST00000420239 LEPP41159 167 aa4.77□□□□□ -1.65
CHD2-202ENST00000420239 LYPD1Q8N2G4 141 aa4.77□□□□□ -1.65
CHD2-202ENST00000420239 LINC00311Q8N616 119 aa4.77□□□□□ -1.65
CHD2-202ENST00000420239 C8orf31Q8N9H6 132 aa4.77□□□□□ -1.65
CHD2-202ENST00000420239 PPDPFLQ8WWR9 84 aa4.77□□□□□ -1.65
CHD2-202ENST00000420239 RNF185Q96GF1 192 aa4.77□□□□□ -1.65
CHD2-202ENST00000420239 AJUBAQ96IF1 538 aa4.77□□□□□ -1.65
CHD2-202ENST00000420239 HARBI1Q96MB7 349 aa4.77□□□□□ -1.65
CHD2-202ENST00000420239 GAFA1Q96PS6 74 aa4.77□□□□□ -1.65
CHD2-202ENST00000420239 HIST1H4GQ99525 98 aa4.77□□□□□ -1.65
CHD2-202ENST00000420239 TMEM133Q9H2Q1 129 aa4.77□□□□□ -1.65
CHD2-202ENST00000420239 RAI1Q7Z5J4 1906 aaPredicted RBP4.77□□□□□ -1.65
CHD2-202ENST00000420239 MYO15AQ9UKN7 3530 aa4.76□□□□□ -1.65
CHD2-202ENST00000420239 IGHV3-21A0A0B4J1V1 117 aa4.76□□□□□ -1.65
CHD2-202ENST00000420239 A0A1W2PPI3 338 aa4.76□□□□□ -1.65
CHD2-202ENST00000420239 CCDC179H3BU77 68 aa4.76□□□□□ -1.65
CHD2-202ENST00000420239 FCER1GP30273 86 aa4.76□□□□□ -1.65
CHD2-202ENST00000420239 CKS2P33552 79 aa4.76□□□□□ -1.65
CHD2-202ENST00000420239 RPL32P62910 135 aaKnown RBP4.76□□□□□ -1.65
CHD2-202ENST00000420239 FAM201AQ5SY85 155 aa4.76□□□□□ -1.65
CHD2-202ENST00000420239 SMIM20Q8N5G0 67 aa4.76□□□□□ -1.65
CHD2-202ENST00000420239 OR4C13Q8NGP0 309 aa4.76□□□□□ -1.65
CHD2-202ENST00000420239 DLX4Q92988 240 aaPredicted RBP4.76□□□□□ -1.65
CHD2-202ENST00000420239 C17orf77Q96MU5 243 aa4.76□□□□□ -1.65
CHD2-202ENST00000420239 RALYQ9UKM9 306 aaKnown RBP4.76□□□□□ -1.65
CHD2-202ENST00000420239 TRAV40A0A0B4J280 105 aa4.76□□□□□ -1.65
CHD2-202ENST00000420239 SH2D1AO60880 128 aa4.76□□□□□ -1.65
CHD2-202ENST00000420239 PRSS1P07477 247 aa4.76□□□□□ -1.65
CHD2-202ENST00000420239 ZFAND6Q6FIF0 208 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms