RNA–Protein interactions for RNA: ENST00000419308.6

FOXA2-202, Transcript of forkhead box A2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene FOXA2, Length 2,422 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA2-202ENST00000419308 IGHG4P01861 327 aa20.62■□□□□ 0.89
FOXA2-202ENST00000419308 PRORYQ9H606 182 aa20.62■□□□□ 0.89
FOXA2-202ENST00000419308 SH2D1AO60880 128 aa20.62■□□□□ 0.89
FOXA2-202ENST00000419308 RHOGP84095 191 aa20.62■□□□□ 0.89
FOXA2-202ENST00000419308 KLK9Q2XQG4 91 aa20.62■□□□□ 0.89
FOXA2-202ENST00000419308 IGFL4Q6B9Z1 124 aa20.62■□□□□ 0.89
FOXA2-202ENST00000419308 LINC00173Q6ZV60 143 aa20.62■□□□□ 0.89
FOXA2-202ENST00000419308 COX8CQ7Z4L0 72 aa20.62■□□□□ 0.89
FOXA2-202ENST00000419308 PIP4P2Q8N4L2 257 aa20.62■□□□□ 0.89
FOXA2-202ENST00000419308 KLK9Q9UKQ9 250 aa20.62■□□□□ 0.89
FOXA2-202ENST00000419308 TRAV9-2A0A087WT02 112 aa20.61■□□□□ 0.89
FOXA2-202ENST00000419308 CRXO43186 299 aaPredicted RBP20.61■□□□□ 0.89
FOXA2-202ENST00000419308 LEPROTL1O95214 131 aa20.61■□□□□ 0.89
FOXA2-202ENST00000419308 RPLP1P05386 114 aaKnown RBP20.61■□□□□ 0.89
FOXA2-202ENST00000419308 PRR25Q96S07 402 aa20.61■□□□□ 0.89
FOXA2-202ENST00000419308 RELQ04864 619 aaPredicted RBP20.61■□□□□ 0.89
FOXA2-202ENST00000419308 SAPCD1Q5SSQ6 148 aa20.61■□□□□ 0.89
FOXA2-202ENST00000419308 TMEM189A5PLL7 270 aa20.6■□□□□ 0.89
FOXA2-202ENST00000419308 CLEC3BP05452 202 aa20.6■□□□□ 0.89
FOXA2-202ENST00000419308 BATFQ16520 125 aa20.6■□□□□ 0.89
FOXA2-202ENST00000419308 Q6ZN92 141 aa20.6■□□□□ 0.89
FOXA2-202ENST00000419308 TMSB15BA0A087X1C1 80 aa20.59■□□□□ 0.89
FOXA2-202ENST00000419308 LINC01548A6NM66 108 aa20.59■□□□□ 0.89
FOXA2-202ENST00000419308 HLA-DMBP28068 263 aa20.59■□□□□ 0.89
FOXA2-202ENST00000419308 CENPVL3A0A0U1RRI6 287 aa20.59■□□□□ 0.89
FOXA2-202ENST00000419308 NPFFO15130 113 aa20.59■□□□□ 0.89
FOXA2-202ENST00000419308 VGLL1Q99990 258 aa20.59■□□□□ 0.89
FOXA2-202ENST00000419308 ZFAND3Q9H8U3 227 aa20.59■□□□□ 0.89
FOXA2-202ENST00000419308 G3V318 75 aa20.58■□□□□ 0.89
FOXA2-202ENST00000419308 CSN3P07498 182 aa20.58■□□□□ 0.89
FOXA2-202ENST00000419308 DMRTA1Q5VZB9 504 aa20.58■□□□□ 0.89
FOXA2-202ENST00000419308 LYZL1Q6UWQ5 148 aa20.58■□□□□ 0.89
FOXA2-202ENST00000419308 Q8TAT8 98 aa20.58■□□□□ 0.89
FOXA2-202ENST00000419308 SYS1-DBNDD2H3BUS1 97 aa20.58■□□□□ 0.88
FOXA2-202ENST00000419308 ZNF493Q6ZR52 646 aa20.58■□□□□ 0.88
FOXA2-202ENST00000419308 GNLYP22749 145 aa20.57■□□□□ 0.88
FOXA2-202ENST00000419308 S100A7P31151 101 aa20.57■□□□□ 0.88
FOXA2-202ENST00000419308 FBLL1A6NHQ2 334 aaKnown RBP20.57■□□□□ 0.88
FOXA2-202ENST00000419308 IGLL1P15814 213 aa20.57■□□□□ 0.88
FOXA2-202ENST00000419308 OR5AL1P0C617 328 aa20.56■□□□□ 0.88
FOXA2-202ENST00000419308 HNRNPA3P51991 378 aaKnown RBP20.56■□□□□ 0.88
FOXA2-202ENST00000419308 CCDC140Q96MF4 163 aa20.56■□□□□ 0.88
FOXA2-202ENST00000419308 C20orf202A1L168 122 aa20.55■□□□□ 0.88
FOXA2-202ENST00000419308 BUB3O43684 328 aa20.55■□□□□ 0.88
FOXA2-202ENST00000419308 ZNF80P51504 273 aaPredicted RBP20.55■□□□□ 0.88
FOXA2-202ENST00000419308 TMEM213A2RRL7 107 aa20.54■□□□□ 0.88
FOXA2-202ENST00000419308 OR4C46A6NHA9 309 aa20.54■□□□□ 0.88
FOXA2-202ENST00000419308 CLEC19AQ6UXS0 136 aa20.54■□□□□ 0.88
FOXA2-202ENST00000419308 IGHV4-39P01824 125 aa20.54■□□□□ 0.88
FOXA2-202ENST00000419308 CYB5R2Q6BCY4 276 aa20.54■□□□□ 0.88
FOXA2-202ENST00000419308 GOSR1O95249 250 aa20.53■□□□□ 0.88
FOXA2-202ENST00000419308 G0S2P27469 103 aa20.53■□□□□ 0.88
FOXA2-202ENST00000419308 C5orf56Q8N8D9 126 aa20.53■□□□□ 0.88
FOXA2-202ENST00000419308 CLPSL1A2RUU4 121 aa20.53■□□□□ 0.88
FOXA2-202ENST00000419308 TSPOP30536 169 aa20.53■□□□□ 0.88
FOXA2-202ENST00000419308 RAB9AP51151 201 aa20.53■□□□□ 0.88
FOXA2-202ENST00000419308 AP5S1Q9NUS5 200 aa20.53■□□□□ 0.88
FOXA2-202ENST00000419308 A0A087X0K7 114 aa20.52■□□□□ 0.87
FOXA2-202ENST00000419308 ZNF25P17030 456 aaPredicted RBP20.52■□□□□ 0.87
FOXA2-202ENST00000419308 LAMTOR2Q9Y2Q5 125 aa20.52■□□□□ 0.87
FOXA2-202ENST00000419308 BMI1P35226 326 aa20.51■□□□□ 0.87
FOXA2-202ENST00000419308 ZFHX3Q15911 3703 aa20.51■□□□□ 0.87
FOXA2-202ENST00000419308 ABCA2Q9BZC7 2435 aa20.51■□□□□ 0.87
FOXA2-202ENST00000419308 MUC21A0A0G2JKD1 596 aa20.51■□□□□ 0.87
FOXA2-202ENST00000419308 MUC21A0A140T8X8 626 aa20.51■□□□□ 0.87
FOXA2-202ENST00000419308 MUC21Q5SSG8 566 aa20.51■□□□□ 0.87
FOXA2-202ENST00000419308 IGHV3-66A0A0C4DH42 116 aa20.5■□□□□ 0.87
FOXA2-202ENST00000419308 COL5A1-AS1Q5SY13 56 aa20.5■□□□□ 0.87
FOXA2-202ENST00000419308 FAM104BQ5XKR9 115 aa20.5■□□□□ 0.87
FOXA2-202ENST00000419308 ZNF575Q86XF7 245 aa20.5■□□□□ 0.87
FOXA2-202ENST00000419308 TMEM219Q86XT9 240 aa20.5■□□□□ 0.87
FOXA2-202ENST00000419308 AMN1Q8IY45 258 aa20.5■□□□□ 0.87
FOXA2-202ENST00000419308 EEF1AKMT3Q96AZ1 226 aa20.5■□□□□ 0.87
FOXA2-202ENST00000419308 MAP1LC3CQ9BXW4 147 aa20.5■□□□□ 0.87
FOXA2-202ENST00000419308 PRAC2D3DTV9 90 aa20.49■□□□□ 0.87
FOXA2-202ENST00000419308 D6R8Y8 96 aa20.49■□□□□ 0.87
FOXA2-202ENST00000419308 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa20.49■□□□□ 0.87
FOXA2-202ENST00000419308 HSPB8Q9UJY1 196 aa20.49■□□□□ 0.87
FOXA2-202ENST00000419308 RNF182Q8N6D2 247 aa20.49■□□□□ 0.87
FOXA2-202ENST00000419308 PRSS3P2Q8NHM4 247 aa20.49■□□□□ 0.87
FOXA2-202ENST00000419308 VPS13CQ709C8 3753 aa20.49■□□□□ 0.87
FOXA2-202ENST00000419308 IGHV3OR16-10A0A075B7F0 116 aa20.48■□□□□ 0.87
FOXA2-202ENST00000419308 RPS20P60866 119 aaKnown RBP20.48■□□□□ 0.87
FOXA2-202ENST00000419308 PAX8Q06710 450 aa20.48■□□□□ 0.87
FOXA2-202ENST00000419308 ERCC8Q13216 396 aa20.48■□□□□ 0.87
FOXA2-202ENST00000419308 MRPS16Q9Y3D3 137 aaKnown RBP20.48■□□□□ 0.87
FOXA2-202ENST00000419308 U3KQK5 164 aa20.48■□□□□ 0.87
FOXA2-202ENST00000419308 SPTAN1Q13813 2472 aaKnown RBP20.48■□□□□ 0.87
FOXA2-202ENST00000419308 TRBV7-1A0A0A6YYK4 115 aa20.48■□□□□ 0.87
FOXA2-202ENST00000419308 TFPI2P48307 235 aa20.48■□□□□ 0.87
FOXA2-202ENST00000419308 IGHV3OR16-13A0A075B7E8 117 aa20.47■□□□□ 0.87
FOXA2-202ENST00000419308 IGHV3-74A0A0B4J1X5 117 aa20.47■□□□□ 0.87
FOXA2-202ENST00000419308 IGLC6P0CF74 106 aa20.47■□□□□ 0.87
FOXA2-202ENST00000419308 PET117Q6UWS5 81 aa20.47■□□□□ 0.87
FOXA2-202ENST00000419308 FA2HQ7L5A8 372 aa20.47■□□□□ 0.87
FOXA2-202ENST00000419308 FER1L6-AS1Q8NA97 138 aa20.47■□□□□ 0.87
FOXA2-202ENST00000419308 STPG4Q8N801 248 aa20.47■□□□□ 0.87
FOXA2-202ENST00000419308 TMEM208Q9BTX3 173 aa20.47■□□□□ 0.87
FOXA2-202ENST00000419308 TIMM8BQ9Y5J9 83 aaPredicted RBP20.47■□□□□ 0.87
FOXA2-202ENST00000419308 IFI27P40305 119 aaPredicted RBP20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 93.2 ms