RNA–Protein interactions for RNA: ENST00000418882.2

HMGB1P49-201, Transcript of high mobility group box 1 pseudogene 49, humanhuman

BASIC

Gene HMGB1P49, Length 569 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P49-201ENST00000418882 HTR1AP08908 422 aa1.46□□□□□ -2.18
HMGB1P49-201ENST00000418882 SCTP09683 121 aa1.46□□□□□ -2.18
HMGB1P49-201ENST00000418882 P0DMU3 169 aa1.46□□□□□ -2.18
HMGB1P49-201ENST00000418882 FAM231AP0DMU4 169 aa1.46□□□□□ -2.18
HMGB1P49-201ENST00000418882 FAM231CP0DMU5 169 aa1.46□□□□□ -2.18
HMGB1P49-201ENST00000418882 HLA-EP13747 358 aa1.46□□□□□ -2.18
HMGB1P49-201ENST00000418882 CMPK1P30085 196 aa1.46□□□□□ -2.18
HMGB1P49-201ENST00000418882 SRP9P49458 86 aaKnown RBP1.46□□□□□ -2.18
HMGB1P49-201ENST00000418882 FXYD2P54710 66 aa1.46□□□□□ -2.18
HMGB1P49-201ENST00000418882 OR8I2Q8N0Y5 310 aa1.46□□□□□ -2.18
HMGB1P49-201ENST00000418882 C10orf126Q8N4M7 172 aa1.46□□□□□ -2.18
HMGB1P49-201ENST00000418882 C20orf166-AS1Q96NR2 134 aa1.46□□□□□ -2.18
HMGB1P49-201ENST00000418882 ADAT1Q9BUB4 502 aaKnown RBP1.46□□□□□ -2.18
HMGB1P49-201ENST00000418882 TPT1P8Q9HAU6 139 aa1.46□□□□□ -2.18
HMGB1P49-201ENST00000418882 BCL2L10Q9HD36 194 aa1.46□□□□□ -2.18
HMGB1P49-201ENST00000418882 SPANXA1Q9NS26 97 aa1.46□□□□□ -2.18
HMGB1P49-201ENST00000418882 U3KQ87 197 aa1.46□□□□□ -2.18
HMGB1P49-201ENST00000418882 RIMBP3CA6NJZ7 1639 aa1.46□□□□□ -2.18
HMGB1P49-201ENST00000418882 RIMBP3BA6NNM3 1639 aa1.46□□□□□ -2.18
HMGB1P49-201ENST00000418882 LRRC37A3O60309 1634 aa1.46□□□□□ -2.18
HMGB1P49-201ENST00000418882 RIMBP3Q9UFD9 1639 aa1.46□□□□□ -2.18
HMGB1P49-201ENST00000418882 CUL9Q8IWT3 2517 aa1.46□□□□□ -2.18
HMGB1P49-201ENST00000418882 OVOS2A0A0G2JMS6 1433 aa1.46□□□□□ -2.18
HMGB1P49-201ENST00000418882 DIP2AQ14689 1571 aa1.46□□□□□ -2.18
HMGB1P49-201ENST00000418882 ERCC6L2Q5T890 1561 aa1.46□□□□□ -2.18
HMGB1P49-201ENST00000418882 UGGT1Q9NYU2 1555 aa1.46□□□□□ -2.18
HMGB1P49-201ENST00000418882 CHD1O14646 1710 aa1.46□□□□□ -2.18
HMGB1P49-201ENST00000418882 PARP4Q9UKK3 1724 aaKnown RBP1.46□□□□□ -2.18
HMGB1P49-201ENST00000418882 ABCC6O95255 1503 aa1.45□□□□□ -2.18
HMGB1P49-201ENST00000418882 ATP7AQ04656 1500 aa1.45□□□□□ -2.18
HMGB1P49-201ENST00000418882 DLC1Q96QB1 1528 aa1.45□□□□□ -2.18
HMGB1P49-201ENST00000418882 C3P01024 1663 aa1.45□□□□□ -2.18
HMGB1P49-201ENST00000418882 MALRD1Q5VYJ5 2156 aa1.45□□□□□ -2.18
HMGB1P49-201ENST00000418882 PXDNLA1KZ92 1463 aa1.45□□□□□ -2.18
HMGB1P49-201ENST00000418882 PTPRMP28827 1452 aa1.45□□□□□ -2.18
HMGB1P49-201ENST00000418882 ATP7BP35670 1465 aa1.45□□□□□ -2.18
HMGB1P49-201ENST00000418882 A0A0G2JQZ4 141 aa1.45□□□□□ -2.18
HMGB1P49-201ENST00000418882 A0A1B0GV90 55 aa1.45□□□□□ -2.18
HMGB1P49-201ENST00000418882 ZNF705FA8MVS1 300 aaPredicted RBP1.45□□□□□ -2.18
HMGB1P49-201ENST00000418882 LINC00587B1AMM8 73 aa1.45□□□□□ -2.18
HMGB1P49-201ENST00000418882 IBA57-AS1B1ANH7 110 aa1.45□□□□□ -2.18
HMGB1P49-201ENST00000418882 K7EP13 123 aa1.45□□□□□ -2.18
HMGB1P49-201ENST00000418882 CST7O76096 145 aa1.45□□□□□ -2.18
HMGB1P49-201ENST00000418882 OR2H2O95918 312 aa1.45□□□□□ -2.18
HMGB1P49-201ENST00000418882 TCL1BO95988 128 aa1.45□□□□□ -2.18
HMGB1P49-201ENST00000418882 IGLV1-51P01701 117 aa1.45□□□□□ -2.18
HMGB1P49-201ENST00000418882 TRGC1P0CF51 173 aa1.45□□□□□ -2.18
HMGB1P49-201ENST00000418882 UBBP0CG47 229 aa1.45□□□□□ -2.18
HMGB1P49-201ENST00000418882 FABP2P12104 132 aa1.45□□□□□ -2.18
HMGB1P49-201ENST00000418882 NFYAP23511 347 aaPredicted RBP1.45□□□□□ -2.18
HMGB1P49-201ENST00000418882 KDELR1P24390 212 aa1.45□□□□□ -2.18
HMGB1P49-201ENST00000418882 SDC2P34741 201 aa1.45□□□□□ -2.18
HMGB1P49-201ENST00000418882 ZNF90Q03938 601 aa1.45□□□□□ -2.18
HMGB1P49-201ENST00000418882 VMA21Q3ZAQ7 101 aa1.45□□□□□ -2.18
HMGB1P49-201ENST00000418882 PABPC1L2AQ5JQF8 200 aa1.45□□□□□ -2.18
HMGB1P49-201ENST00000418882 TMEM244Q5VVB8 128 aa1.45□□□□□ -2.18
HMGB1P49-201ENST00000418882 LINC00305Q7Z4B0 112 aa1.45□□□□□ -2.18
HMGB1P49-201ENST00000418882 SLC30A7Q8NEW0 376 aa1.45□□□□□ -2.18
HMGB1P49-201ENST00000418882 MRPS24Q96EL2 167 aaKnown RBP1.45□□□□□ -2.18
HMGB1P49-201ENST00000418882 YPEL2Q96QA6 119 aa1.45□□□□□ -2.18
HMGB1P49-201ENST00000418882 Q9BRP9 147 aa1.45□□□□□ -2.18
HMGB1P49-201ENST00000418882 PSORS1C2Q9UIG4 136 aa1.45□□□□□ -2.18
HMGB1P49-201ENST00000418882 CEP170BQ9Y4F5 1589 aaPredicted RBP1.45□□□□□ -2.18
HMGB1P49-201ENST00000418882 C4AP0C0L4 1744 aa1.45□□□□□ -2.18
HMGB1P49-201ENST00000418882 C4BP0C0L5 1744 aa1.45□□□□□ -2.18
HMGB1P49-201ENST00000418882 CCDC88AQ3V6T2 1871 aa1.45□□□□□ -2.18
HMGB1P49-201ENST00000418882 SLIT2O94813 1529 aa1.45□□□□□ -2.18
HMGB1P49-201ENST00000418882 SLX4Q8IY92 1834 aa1.45□□□□□ -2.18
HMGB1P49-201ENST00000418882 SPEF2Q9C093 1822 aa1.45□□□□□ -2.18
HMGB1P49-201ENST00000418882 AKAP11Q9UKA4 1901 aa1.44□□□□□ -2.18
HMGB1P49-201ENST00000418882 SIPA1L3O60292 1781 aaPredicted RBP1.44□□□□□ -2.18
HMGB1P49-201ENST00000418882 KDM3BQ7LBC6 1761 aa1.44□□□□□ -2.18
HMGB1P49-201ENST00000418882 CASZ1Q86V15 1759 aa1.44□□□□□ -2.18
HMGB1P49-201ENST00000418882 TMEM131LA2VDJ0 1609 aa1.44□□□□□ -2.18
HMGB1P49-201ENST00000418882 NWD2Q9ULI1 1742 aa1.44□□□□□ -2.18
HMGB1P49-201ENST00000418882 OVOS2A0A0J9YW53 1432 aa1.44□□□□□ -2.18
HMGB1P49-201ENST00000418882 KDM6AO15550 1401 aaPredicted RBP1.44□□□□□ -2.18
HMGB1P49-201ENST00000418882 OVOS2Q6IE36 1432 aa1.44□□□□□ -2.18
HMGB1P49-201ENST00000418882 TRGV10A0A0A0MS01 117 aa1.44□□□□□ -2.18
HMGB1P49-201ENST00000418882 TRAV5A0A0B4J249 113 aa1.44□□□□□ -2.18
HMGB1P49-201ENST00000418882 A0A0D9SG52 128 aa1.44□□□□□ -2.18
HMGB1P49-201ENST00000418882 TRBV7-6A0A0J9YX20 115 aa1.44□□□□□ -2.18
HMGB1P49-201ENST00000418882 EFCAB10A6NFE3 127 aa1.44□□□□□ -2.18
HMGB1P49-201ENST00000418882 H3BQF6 201 aa1.44□□□□□ -2.18
HMGB1P49-201ENST00000418882 COX6A1P12074 109 aa1.44□□□□□ -2.18
HMGB1P49-201ENST00000418882 COX4I1P13073 169 aa1.44□□□□□ -2.18
HMGB1P49-201ENST00000418882 PEBP1P30086 187 aaKnown RBP1.44□□□□□ -2.18
HMGB1P49-201ENST00000418882 RAB5CP51148 216 aa1.44□□□□□ -2.18
HMGB1P49-201ENST00000418882 FOXA3P55318 350 aaPredicted RBP1.44□□□□□ -2.18
HMGB1P49-201ENST00000418882 DNAJB13P59910 316 aa1.44□□□□□ -2.18
HMGB1P49-201ENST00000418882 ZNF345Q14585 488 aa1.44□□□□□ -2.18
HMGB1P49-201ENST00000418882 GLYATL3Q5SZD4 288 aa1.44□□□□□ -2.18
HMGB1P49-201ENST00000418882 EIF5AL1Q6IS14 154 aaKnown RBP1.44□□□□□ -2.18
HMGB1P49-201ENST00000418882 TMEM14EPQ6UXP3 125 aa1.44□□□□□ -2.18
HMGB1P49-201ENST00000418882 DPPA3Q6W0C5 159 aa1.44□□□□□ -2.18
HMGB1P49-201ENST00000418882 AAED1Q7RTV5 226 aa1.44□□□□□ -2.18
HMGB1P49-201ENST00000418882 TCTE3Q8IZS6 198 aa1.44□□□□□ -2.18
HMGB1P49-201ENST00000418882 OR4X2Q8NGF9 303 aa1.44□□□□□ -2.18
HMGB1P49-201ENST00000418882 SPACA4Q8TDM5 124 aa1.44□□□□□ -2.18
HMGB1P49-201ENST00000418882 BRK1Q8WUW1 75 aa1.44□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms