RNA–Protein interactions for RNA: ENST00000416649.6

NCKIPSD-204, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,925 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-204ENST00000416649 SPINK8P0C7L1 97 aa11.68□□□□□ -0.54
NCKIPSD-204ENST00000416649 GP9P14770 177 aa11.68□□□□□ -0.54
NCKIPSD-204ENST00000416649 LYZL1Q6UWQ5 148 aa11.68□□□□□ -0.54
NCKIPSD-204ENST00000416649 ZCCHC24Q8N2G6 241 aaKnown RBP11.68□□□□□ -0.54
NCKIPSD-204ENST00000416649 SYT8Q8NBV8 401 aa11.68□□□□□ -0.54
NCKIPSD-204ENST00000416649 APOMO95445 188 aa11.68□□□□□ -0.54
NCKIPSD-204ENST00000416649 PHLDA1Q8WV24 401 aaPredicted RBP11.68□□□□□ -0.54
NCKIPSD-204ENST00000416649 MRPL16Q9NX20 251 aaKnown RBP11.68□□□□□ -0.54
NCKIPSD-204ENST00000416649 NPYP01303 97 aa11.67□□□□□ -0.54
NCKIPSD-204ENST00000416649 CECR9P0C854 216 aa11.67□□□□□ -0.54
NCKIPSD-204ENST00000416649 GATA3P23771 443 aa11.67□□□□□ -0.54
NCKIPSD-204ENST00000416649 CEND1Q8N111 149 aa11.67□□□□□ -0.54
NCKIPSD-204ENST00000416649 SS18L2Q9UHA2 77 aa11.67□□□□□ -0.54
NCKIPSD-204ENST00000416649 DCHS2Q6V1P9 2916 aa11.67□□□□□ -0.54
NCKIPSD-204ENST00000416649 E9PLD3 99 aa11.67□□□□□ -0.54
NCKIPSD-204ENST00000416649 C16orf97H3BN30 126 aa11.67□□□□□ -0.54
NCKIPSD-204ENST00000416649 TNFRSF1AP19438 455 aa11.67□□□□□ -0.54
NCKIPSD-204ENST00000416649 DLX1P56177 255 aa11.67□□□□□ -0.54
NCKIPSD-204ENST00000416649 MRPL51Q4U2R6 128 aaKnown RBP11.66□□□□□ -0.54
NCKIPSD-204ENST00000416649 ZC2HC1BQ5TFG8 222 aa11.66□□□□□ -0.54
NCKIPSD-204ENST00000416649 C17orf77Q96MU5 243 aa11.66□□□□□ -0.54
NCKIPSD-204ENST00000416649 ZNF785A8K8V0 405 aa11.66□□□□□ -0.54
NCKIPSD-204ENST00000416649 OVOL3O00110 214 aa11.66□□□□□ -0.54
NCKIPSD-204ENST00000416649 IGLV2-11P01706 119 aa11.66□□□□□ -0.54
NCKIPSD-204ENST00000416649 CCL13Q99616 98 aa11.66□□□□□ -0.54
NCKIPSD-204ENST00000416649 FOXC2Q99958 501 aa11.66□□□□□ -0.54
NCKIPSD-204ENST00000416649 TMEM160Q9NX00 188 aa11.66□□□□□ -0.54
NCKIPSD-204ENST00000416649 HIST1H4GQ99525 98 aa11.66□□□□□ -0.54
NCKIPSD-204ENST00000416649 PRRG2O14669 202 aa11.65□□□□□ -0.54
NCKIPSD-204ENST00000416649 CGB3P0DN86 165 aa11.65□□□□□ -0.54
NCKIPSD-204ENST00000416649 CGB7P0DN87 165 aa11.65□□□□□ -0.54
NCKIPSD-204ENST00000416649 FAM104BQ5XKR9 115 aa11.65□□□□□ -0.54
NCKIPSD-204ENST00000416649 FAM216BQ8N7L0 139 aa11.65□□□□□ -0.54
NCKIPSD-204ENST00000416649 TPSG1Q9NRR2 321 aa11.65□□□□□ -0.54
NCKIPSD-204ENST00000416649 MT-ATP8P03928 68 aa11.65□□□□□ -0.54
NCKIPSD-204ENST00000416649 CT45A10P0DMU9 189 aa11.65□□□□□ -0.54
NCKIPSD-204ENST00000416649 C8orf86Q6ZUL3 223 aa11.65□□□□□ -0.54
NCKIPSD-204ENST00000416649 THAP8Q8NA92 274 aa11.65□□□□□ -0.54
NCKIPSD-204ENST00000416649 C8orf49Q96NF6 230 aa11.65□□□□□ -0.54
NCKIPSD-204ENST00000416649 OTORQ9NRC9 128 aa11.65□□□□□ -0.54
NCKIPSD-204ENST00000416649 HIGD1AQ9Y241 93 aa11.65□□□□□ -0.54
NCKIPSD-204ENST00000416649 CGB1A6NKQ9 187 aa11.64□□□□□ -0.55
NCKIPSD-204ENST00000416649 M0R3E3 92 aa11.64□□□□□ -0.55
NCKIPSD-204ENST00000416649 LEPP41159 167 aa11.64□□□□□ -0.55
NCKIPSD-204ENST00000416649 C12orf74Q32Q52 190 aa11.64□□□□□ -0.55
NCKIPSD-204ENST00000416649 RAB9BQ9NP90 201 aa11.64□□□□□ -0.55
NCKIPSD-204ENST00000416649 NPIPB5A8MRT5 1133 aa11.64□□□□□ -0.55
NCKIPSD-204ENST00000416649 ENSAO43768 121 aaKnown RBP11.64□□□□□ -0.55
NCKIPSD-204ENST00000416649 IGHG3P01860 377 aa11.64□□□□□ -0.55
NCKIPSD-204ENST00000416649 CRIP1P50238 77 aa11.64□□□□□ -0.55
NCKIPSD-204ENST00000416649 DIAPH2-AS1Q14236 149 aa11.64□□□□□ -0.55
NCKIPSD-204ENST00000416649 TWIST1Q15672 202 aa11.64□□□□□ -0.55
NCKIPSD-204ENST00000416649 ZNF562Q6V9R5 426 aa11.64□□□□□ -0.55
NCKIPSD-204ENST00000416649 OSR1Q8TAX0 266 aaPredicted RBP11.64□□□□□ -0.55
NCKIPSD-204ENST00000416649 GLMPQ8WWB7 406 aa11.64□□□□□ -0.55
NCKIPSD-204ENST00000416649 RNF183Q96D59 192 aa11.64□□□□□ -0.55
NCKIPSD-204ENST00000416649 DKK4Q9UBT3 224 aa11.64□□□□□ -0.55
NCKIPSD-204ENST00000416649 PSG8Q9UQ74 426 aa11.64□□□□□ -0.55
NCKIPSD-204ENST00000416649 IGHV3-72A0A0B4J1Y9 119 aa11.63□□□□□ -0.55
NCKIPSD-204ENST00000416649 A0A1W2PPI3 338 aa11.63□□□□□ -0.55
NCKIPSD-204ENST00000416649 WI2-2373I1.2A0A1W2PRP0 233 aa11.63□□□□□ -0.55
NCKIPSD-204ENST00000416649 IGKCP01834 107 aa11.63□□□□□ -0.55
NCKIPSD-204ENST00000416649 EVI2AP22794 236 aa11.63□□□□□ -0.55
NCKIPSD-204ENST00000416649 MSMPQ1L6U9 139 aa11.63□□□□□ -0.55
NCKIPSD-204ENST00000416649 RPUSD1Q9UJJ7 312 aaKnown RBP11.63□□□□□ -0.55
NCKIPSD-204ENST00000416649 IGFL2Q6UWQ7 119 aa11.63□□□□□ -0.55
NCKIPSD-204ENST00000416649 SEM1Q6ZVN7 128 aa11.63□□□□□ -0.55
NCKIPSD-204ENST00000416649 ODF1Q14990 250 aa11.63□□□□□ -0.55
NCKIPSD-204ENST00000416649 PRR30Q53SZ7 412 aaPredicted RBP11.63□□□□□ -0.55
NCKIPSD-204ENST00000416649 HIGD1BQ9P298 99 aa11.63□□□□□ -0.55
NCKIPSD-204ENST00000416649 HHLA3Q9XRX5 114 aa11.63□□□□□ -0.55
NCKIPSD-204ENST00000416649 A0A1B0GW15 77 aa11.62□□□□□ -0.55
NCKIPSD-204ENST00000416649 Q6ZT83 130 aa11.62□□□□□ -0.55
NCKIPSD-204ENST00000416649 C8orf46Q8TAG6 207 aa11.62□□□□□ -0.55
NCKIPSD-204ENST00000416649 ZNF418Q8TF45 676 aaPredicted RBP11.62□□□□□ -0.55
NCKIPSD-204ENST00000416649 CYSLTR1Q9Y271 337 aa11.62□□□□□ -0.55
NCKIPSD-204ENST00000416649 TRAV40A0A0B4J280 105 aa11.62□□□□□ -0.55
NCKIPSD-204ENST00000416649 TMEM8BA6NDV4 472 aa11.62□□□□□ -0.55
NCKIPSD-204ENST00000416649 RBP4P02753 201 aa11.62□□□□□ -0.55
NCKIPSD-204ENST00000416649 MAPKAPK5-AS1Q8N8E1 139 aa11.62□□□□□ -0.55
NCKIPSD-204ENST00000416649 SRSF8Q9BRL6 282 aaKnown RBP11.62□□□□□ -0.55
NCKIPSD-204ENST00000416649 DSCAML1Q8TD84 2053 aa11.62□□□□□ -0.55
NCKIPSD-204ENST00000416649 GAS8-AS1O95177 125 aa11.61□□□□□ -0.55
NCKIPSD-204ENST00000416649 MZT1Q08AG7 82 aa11.61□□□□□ -0.55
NCKIPSD-204ENST00000416649 IGFBPL1Q8WX77 278 aa11.61□□□□□ -0.55
NCKIPSD-204ENST00000416649 TM2D2Q9BX73 214 aa11.61□□□□□ -0.55
NCKIPSD-204ENST00000416649 IGKV3-15P01624 115 aa11.61□□□□□ -0.55
NCKIPSD-204ENST00000416649 TTC9CQ8N5M4 171 aa11.61□□□□□ -0.55
NCKIPSD-204ENST00000416649 CCL3L1P16619 93 aa11.6□□□□□ -0.55
NCKIPSD-204ENST00000416649 FOXI1Q12951 378 aa11.6□□□□□ -0.55
NCKIPSD-204ENST00000416649 KLF17Q5JT82 389 aaPredicted RBP11.6□□□□□ -0.55
NCKIPSD-204ENST00000416649 OR10X1Q8NGY0 326 aa11.6□□□□□ -0.55
NCKIPSD-204ENST00000416649 ZNF502Q8TBZ5 544 aa11.6□□□□□ -0.55
NCKIPSD-204ENST00000416649 SLC25A39Q9BZJ4 359 aaPredicted RBP11.6□□□□□ -0.55
NCKIPSD-204ENST00000416649 PROCRQ9UNN8 238 aa11.6□□□□□ -0.55
NCKIPSD-204ENST00000416649 MBNL2Q5VZF2 373 aaKnown RBP11.6□□□□□ -0.55
NCKIPSD-204ENST00000416649 OR4C13Q8NGP0 309 aa11.6□□□□□ -0.55
NCKIPSD-204ENST00000416649 PTH2Q96A98 100 aa11.6□□□□□ -0.55
NCKIPSD-204ENST00000416649 TMEM133Q9H2Q1 129 aa11.6□□□□□ -0.55
NCKIPSD-204ENST00000416649 RRN3P1Q2M238 152 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms