RNA–Protein interactions for RNA: ENST00000415825.2

TRAPPC13-203, Transcript of trafficking protein particle complex 13, humanhuman

TSL 1 (best)

Gene TRAPPC13, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-203ENST00000415825 LINC00467Q9BRT7 94 aa0.01□□□□□ -2.41
TRAPPC13-203ENST00000415825 OR2J1Q9GZK6 312 aa0.01□□□□□ -2.41
TRAPPC13-203ENST00000415825 PBOV1Q9GZY1 135 aa0.01□□□□□ -2.41
TRAPPC13-203ENST00000415825 TMEM138Q9NPI0 162 aa0.01□□□□□ -2.41
TRAPPC13-203ENST00000415825 LYRM2Q9NU23 88 aaPredicted RBP0.01□□□□□ -2.41
TRAPPC13-203ENST00000415825 FKBP11Q9NYL4 201 aa0.01□□□□□ -2.41
TRAPPC13-203ENST00000415825 TNFSF18Q9UNG2 199 aa0.01□□□□□ -2.41
TRAPPC13-203ENST00000415825 SSR3Q9UNL2 185 aa0.01□□□□□ -2.41
TRAPPC13-203ENST00000415825 EIF3AQ14152 1382 aaKnown RBP0.01□□□□□ -2.41
TRAPPC13-203ENST00000415825 APCP25054 2843 aa0.01□□□□□ -2.41
TRAPPC13-203ENST00000415825 TNS3Q68CZ2 1445 aa0.01□□□□□ -2.41
TRAPPC13-203ENST00000415825 MGAMO43451 1857 aa0.01□□□□□ -2.41
TRAPPC13-203ENST00000415825 STAB2Q8WWQ8 2551 aa0□□□□□ -2.41
TRAPPC13-203ENST00000415825 TRAV5A0A0B4J249 113 aa0□□□□□ -2.41
TRAPPC13-203ENST00000415825 A0A0J9YY99 117 aa0□□□□□ -2.41
TRAPPC13-203ENST00000415825 NBDYA0A0U1RRE5 68 aa0□□□□□ -2.41
TRAPPC13-203ENST00000415825 A0A1W2PRE2 83 aa0□□□□□ -2.41
TRAPPC13-203ENST00000415825 ZNF727A8MUV8 499 aa0□□□□□ -2.41
TRAPPC13-203ENST00000415825 PDZD2O15018 2839 aa0□□□□□ -2.41
TRAPPC13-203ENST00000415825 CACNA1HO95180 2353 aa0□□□□□ -2.41
TRAPPC13-203ENST00000415825 LY6G6CO95867 125 aa0□□□□□ -2.41
TRAPPC13-203ENST00000415825 RPL7P18124 248 aaKnown RBP0□□□□□ -2.41
TRAPPC13-203ENST00000415825 PDE6GP18545 87 aa0□□□□□ -2.41
TRAPPC13-203ENST00000415825 BASP1P80723 227 aaKnown RBP0□□□□□ -2.41
TRAPPC13-203ENST00000415825 PTPN13Q12923 2485 aa0□□□□□ -2.41
TRAPPC13-203ENST00000415825 DIAPH2-AS1Q14236 149 aa0□□□□□ -2.41
TRAPPC13-203ENST00000415825 TMED2Q15363 201 aa0□□□□□ -2.41
TRAPPC13-203ENST00000415825 RTL8BQ17RB0 113 aa0□□□□□ -2.41
TRAPPC13-203ENST00000415825 SPATA45Q537H7 98 aa0□□□□□ -2.41
TRAPPC13-203ENST00000415825 SPINK9Q5DT21 86 aa0□□□□□ -2.41
TRAPPC13-203ENST00000415825 CAMSAP1Q5T5Y3 1602 aa0□□□□□ -2.41
TRAPPC13-203ENST00000415825 TMEM78Q5T7P6 136 aa0□□□□□ -2.41
TRAPPC13-203ENST00000415825 DENND4CQ5VZ89 1909 aa0□□□□□ -2.41
TRAPPC13-203ENST00000415825 C2orf82Q6UX34 121 aa0□□□□□ -2.41
TRAPPC13-203ENST00000415825 LINC00575Q6W349 94 aa0□□□□□ -2.41
TRAPPC13-203ENST00000415825 CD109Q6YHK3 1445 aa0□□□□□ -2.41
TRAPPC13-203ENST00000415825 SETXQ7Z333 2677 aaKnown RBP0□□□□□ -2.41
TRAPPC13-203ENST00000415825 MEGF8Q7Z7M0 2845 aa0□□□□□ -2.41
TRAPPC13-203ENST00000415825 TEN1Q86WV5 123 aa0□□□□□ -2.41
TRAPPC13-203ENST00000415825 PRR15Q8IV56 129 aa0□□□□□ -2.41
TRAPPC13-203ENST00000415825 LRRC18Q8N456 261 aa0□□□□□ -2.41
TRAPPC13-203ENST00000415825 FAM216BQ8N7L0 139 aa0□□□□□ -2.41
TRAPPC13-203ENST00000415825 RTL9Q8NET4 1388 aa0□□□□□ -2.41
TRAPPC13-203ENST00000415825 OR10AG1Q8NH19 301 aa0□□□□□ -2.41
TRAPPC13-203ENST00000415825 OR13C6PQ8NH95 151 aa0□□□□□ -2.41
TRAPPC13-203ENST00000415825 NEK7Q8TDX7 302 aa0□□□□□ -2.41
TRAPPC13-203ENST00000415825 RMND5BQ96G75 393 aaPredicted RBP0□□□□□ -2.41
TRAPPC13-203ENST00000415825 LINC00208Q96KT6 92 aa0□□□□□ -2.41
TRAPPC13-203ENST00000415825 CCL19Q99731 98 aa0□□□□□ -2.41
TRAPPC13-203ENST00000415825 RTL8AQ9BWD3 113 aa0□□□□□ -2.41
TRAPPC13-203ENST00000415825 OR2H1Q9GZK4 316 aa0□□□□□ -2.41
TRAPPC13-203ENST00000415825 BOLA2Q9H3K6 86 aa0□□□□□ -2.41
TRAPPC13-203ENST00000415825 GID8Q9NWU2 228 aa0□□□□□ -2.41
TRAPPC13-203ENST00000415825 COMMD3Q9UBI1 195 aa0□□□□□ -2.41
TRAPPC13-203ENST00000415825 NAT8BQ9UHF3 227 aa0□□□□□ -2.41
TRAPPC13-203ENST00000415825 ZANQ9Y493 2812 aa-0□□□□□ -2.41
TRAPPC13-203ENST00000415825 STAB1Q9NY15 2570 aa-0□□□□□ -2.41
TRAPPC13-203ENST00000415825 NCOR1O75376 2440 aa-0.01□□□□□ -2.41
TRAPPC13-203ENST00000415825 ABCA4P78363 2273 aa-0.01□□□□□ -2.41
TRAPPC13-203ENST00000415825 ASXL3Q9C0F0 2248 aa-0.01□□□□□ -2.41
TRAPPC13-203ENST00000415825 ZFC3H1O60293 1989 aaKnown RBP-0.01□□□□□ -2.41
TRAPPC13-203ENST00000415825 OBSL1O75147 1896 aa-0.01□□□□□ -2.41
TRAPPC13-203ENST00000415825 ECM29Q5VYK3 1845 aa-0.01□□□□□ -2.41
TRAPPC13-203ENST00000415825 COL24A1Q17RW2 1714 aa-0.01□□□□□ -2.41
TRAPPC13-203ENST00000415825 TECPR2O15040 1411 aa-0.01□□□□□ -2.41
TRAPPC13-203ENST00000415825 ERBINQ96RT1 1412 aa-0.01□□□□□ -2.41
TRAPPC13-203ENST00000415825 ZNF292O60281 2723 aa-0.01□□□□□ -2.41
TRAPPC13-203ENST00000415825 IGLV3-32A0A0A0MS00 114 aa-0.01□□□□□ -2.41
TRAPPC13-203ENST00000415825 TRBV30A0A0K0K1B3 111 aa-0.01□□□□□ -2.41
TRAPPC13-203ENST00000415825 TRDV1A0A1B0GX56 115 aa-0.01□□□□□ -2.41
TRAPPC13-203ENST00000415825 A0A1W2PRS3 328 aa-0.01□□□□□ -2.41
TRAPPC13-203ENST00000415825 A6NN06 94 aa-0.01□□□□□ -2.41
TRAPPC13-203ENST00000415825 GABARAPH6UMI1 98 aa-0.01□□□□□ -2.41
TRAPPC13-203ENST00000415825 AIPO00170 330 aa-0.01□□□□□ -2.41
TRAPPC13-203ENST00000415825 HIST1H2BKO60814 126 aa-0.01□□□□□ -2.41
TRAPPC13-203ENST00000415825 IGHV3-30P01768 117 aa-0.01□□□□□ -2.41
TRAPPC13-203ENST00000415825 HIST1H2BJP06899 126 aa-0.01□□□□□ -2.41
TRAPPC13-203ENST00000415825 IGHV3-30-5P0DP03 117 aa-0.01□□□□□ -2.41
TRAPPC13-203ENST00000415825 RPS3P23396 243 aaKnown RBP eCLIP-0.01□□□□□ -2.41
TRAPPC13-203ENST00000415825 S100A11P31949 105 aa-0.01□□□□□ -2.41
TRAPPC13-203ENST00000415825 RPL35P42766 123 aaKnown RBP-0.01□□□□□ -2.41
TRAPPC13-203ENST00000415825 RPL37AP61513 92 aaKnown RBP-0.01□□□□□ -2.41
TRAPPC13-203ENST00000415825 QRFPP83859 136 aa-0.01□□□□□ -2.41
TRAPPC13-203ENST00000415825 MYL5Q02045 173 aa-0.01□□□□□ -2.41
TRAPPC13-203ENST00000415825 SCGB2B2Q4G0G5 96 aa-0.01□□□□□ -2.41
TRAPPC13-203ENST00000415825 Q5XG85 94 aa-0.01□□□□□ -2.41
TRAPPC13-203ENST00000415825 DCUN1D2Q6PH85 259 aa-0.01□□□□□ -2.41
TRAPPC13-203ENST00000415825 Q86TA4 180 aa-0.01□□□□□ -2.41
TRAPPC13-203ENST00000415825 ATOH7Q8N100 152 aa-0.01□□□□□ -2.41
TRAPPC13-203ENST00000415825 STX19Q8N4C7 294 aa-0.01□□□□□ -2.41
TRAPPC13-203ENST00000415825 TEX29Q8N6K0 151 aa-0.01□□□□□ -2.41
TRAPPC13-203ENST00000415825 CLEC2BQ92478 149 aa-0.01□□□□□ -2.41
TRAPPC13-203ENST00000415825 PBDC1Q9BVG4 233 aa-0.01□□□□□ -2.41
TRAPPC13-203ENST00000415825 LPAR5Q9H1C0 372 aa-0.01□□□□□ -2.41
TRAPPC13-203ENST00000415825 MED11Q9P086 117 aa-0.01□□□□□ -2.41
TRAPPC13-203ENST00000415825 SMPXQ9UHP9 88 aa-0.01□□□□□ -2.41
TRAPPC13-203ENST00000415825 NUBP2Q9Y5Y2 271 aa-0.01□□□□□ -2.41
TRAPPC13-203ENST00000415825 DOPEY1Q5JWR5 2465 aa-0.01□□□□□ -2.41
TRAPPC13-203ENST00000415825 SPTBP11277 2137 aa-0.01□□□□□ -2.41
TRAPPC13-203ENST00000415825 ZGRF1Q86YA3 2104 aa-0.01□□□□□ -2.41
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms