RNA–Protein interactions for RNA: ENST00000415395.6

RFFL-205, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RFFL, Length 1,706 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-205ENST00000415395 TEX29Q8N6K0 151 aa9.08□□□□□ -0.96
RFFL-205ENST00000415395 NDFIP1Q9BT67 221 aa9.08□□□□□ -0.96
RFFL-205ENST00000415395 Q9H3A6 140 aa9.08□□□□□ -0.96
RFFL-205ENST00000415395 HSPB8Q9UJY1 196 aa9.08□□□□□ -0.96
RFFL-205ENST00000415395 RPH3ALQ9UNE2 315 aa9.08□□□□□ -0.96
RFFL-205ENST00000415395 MOB4Q9Y3A3 225 aa9.08□□□□□ -0.96
RFFL-205ENST00000415395 VPS13CQ709C8 3753 aa9.08□□□□□ -0.96
RFFL-205ENST00000415395 IGHV7-81A0A0B4J1V7 117 aa9.08□□□□□ -0.96
RFFL-205ENST00000415395 CRXO43186 299 aaPredicted RBP9.08□□□□□ -0.96
RFFL-205ENST00000415395 FSHBP01225 129 aa9.08□□□□□ -0.96
RFFL-205ENST00000415395 GP9P14770 177 aa9.08□□□□□ -0.96
RFFL-205ENST00000415395 GDF5OSQ5U4N7 250 aa9.08□□□□□ -0.96
RFFL-205ENST00000415395 Q6AWC8 147 aa9.08□□□□□ -0.96
RFFL-205ENST00000415395 C9orf139Q6ZV77 190 aa9.08□□□□□ -0.96
RFFL-205ENST00000415395 PIFOQ8TCI5 191 aa9.08□□□□□ -0.96
RFFL-205ENST00000415395 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.07□□□□□ -0.96
RFFL-205ENST00000415395 C2orf70A6NJV1 201 aa9.07□□□□□ -0.96
RFFL-205ENST00000415395 LEPROTL1O95214 131 aa9.07□□□□□ -0.96
RFFL-205ENST00000415395 RIGQ13278 110 aa9.07□□□□□ -0.96
RFFL-205ENST00000415395 EBLN2Q6P2I7 272 aa9.07□□□□□ -0.96
RFFL-205ENST00000415395 PET117Q6UWS5 81 aa9.07□□□□□ -0.96
RFFL-205ENST00000415395 Q86TA4 180 aa9.07□□□□□ -0.96
RFFL-205ENST00000415395 TTC9CQ8N5M4 171 aa9.07□□□□□ -0.96
RFFL-205ENST00000415395 C5orf56Q8N8D9 126 aa9.07□□□□□ -0.96
RFFL-205ENST00000415395 SSBP4Q9BWG4 385 aaPredicted RBP9.07□□□□□ -0.96
RFFL-205ENST00000415395 MAP1LC3CQ9BXW4 147 aa9.07□□□□□ -0.96
RFFL-205ENST00000415395 OR4C46A6NHA9 309 aa9.06□□□□□ -0.96
RFFL-205ENST00000415395 NPIPB6E9PJ23 425 aa9.06□□□□□ -0.96
RFFL-205ENST00000415395 HAX1O00165 279 aa9.06□□□□□ -0.96
RFFL-205ENST00000415395 TFPI2P48307 235 aa9.06□□□□□ -0.96
RFFL-205ENST00000415395 PTTG1IPP53801 180 aa9.06□□□□□ -0.96
RFFL-205ENST00000415395 TCF24Q7RTU0 167 aa9.06□□□□□ -0.96
RFFL-205ENST00000415395 LYPD1Q8N2G4 141 aa9.06□□□□□ -0.96
RFFL-205ENST00000415395 STPG4Q8N801 248 aa9.06□□□□□ -0.96
RFFL-205ENST00000415395 MAPK1IP1LQ8NDC0 245 aa9.06□□□□□ -0.96
RFFL-205ENST00000415395 GCN1Q92616 2671 aaKnown RBP9.06□□□□□ -0.96
RFFL-205ENST00000415395 LOC102724200A0A096LPH7 203 aaPredicted RBP9.05□□□□□ -0.96
RFFL-205ENST00000415395 A6NDX4 124 aa9.05□□□□□ -0.96
RFFL-205ENST00000415395 SYS1-DBNDD2H3BUS1 97 aa9.05□□□□□ -0.96
RFFL-205ENST00000415395 TCF21O43680 179 aa9.05□□□□□ -0.96
RFFL-205ENST00000415395 NDPQ00604 133 aa9.05□□□□□ -0.96
RFFL-205ENST00000415395 KLK9Q2XQG4 91 aa9.05□□□□□ -0.96
RFFL-205ENST00000415395 ATOH7Q8N100 152 aa9.05□□□□□ -0.96
RFFL-205ENST00000415395 OR4F17Q8NGA8 305 aa9.05□□□□□ -0.96
RFFL-205ENST00000415395 PGLYRP4Q96LB8 373 aa9.05□□□□□ -0.96
RFFL-205ENST00000415395 PMCHL2Q9BQD1 86 aa9.05□□□□□ -0.96
RFFL-205ENST00000415395 MS4A6AQ9H2W1 248 aa9.05□□□□□ -0.96
RFFL-205ENST00000415395 KLK9Q9UKQ9 250 aa9.05□□□□□ -0.96
RFFL-205ENST00000415395 COX11Q9Y6N1 276 aa9.05□□□□□ -0.96
RFFL-205ENST00000415395 CREBBPQ92793 2442 aa9.05□□□□□ -0.96
RFFL-205ENST00000415395 IGLL1P15814 213 aa9.05□□□□□ -0.96
RFFL-205ENST00000415395 HINT1P49773 126 aaPredicted RBP9.05□□□□□ -0.96
RFFL-205ENST00000415395 CRIP2P52943 208 aaPredicted RBP9.05□□□□□ -0.96
RFFL-205ENST00000415395 ASPHD1Q5U4P2 390 aa9.05□□□□□ -0.96
RFFL-205ENST00000415395 LEMD1Q68G75 181 aa9.05□□□□□ -0.96
RFFL-205ENST00000415395 LCN12Q6JVE5 192 aa9.05□□□□□ -0.96
RFFL-205ENST00000415395 C12orf54Q6X4T0 127 aa9.05□□□□□ -0.96
RFFL-205ENST00000415395 CSMD2Q7Z408 3487 aa9.05□□□□□ -0.96
RFFL-205ENST00000415395 TMEM75Q8N9X5 138 aa9.05□□□□□ -0.96
RFFL-205ENST00000415395 THYN1Q9P016 225 aa9.05□□□□□ -0.96
RFFL-205ENST00000415395 MAP1AP78559 2803 aaPredicted RBP9.04□□□□□ -0.96
RFFL-205ENST00000415395 IGHV1-24A0A0C4DH33 117 aa9.04□□□□□ -0.96
RFFL-205ENST00000415395 H3BUX3 64 aa9.04□□□□□ -0.96
RFFL-205ENST00000415395 I3L2K1 104 aa9.04□□□□□ -0.96
RFFL-205ENST00000415395 APELAP0DMC3 54 aa9.04□□□□□ -0.96
RFFL-205ENST00000415395 EGR2P11161 476 aaPredicted RBP9.04□□□□□ -0.96
RFFL-205ENST00000415395 FOXA3P55318 350 aaPredicted RBP9.04□□□□□ -0.96
RFFL-205ENST00000415395 LYZP61626 148 aa9.04□□□□□ -0.96
RFFL-205ENST00000415395 UBE2V1Q13404 147 aa9.04□□□□□ -0.96
RFFL-205ENST00000415395 SLC25A34Q6PIV7 304 aa9.04□□□□□ -0.96
RFFL-205ENST00000415395 BPIFA4PQ86YQ2 179 aa9.04□□□□□ -0.96
RFFL-205ENST00000415395 WFDC11Q8NEX6 87 aa9.04□□□□□ -0.96
RFFL-205ENST00000415395 FAM110DQ8TAY7 271 aaPredicted RBP9.04□□□□□ -0.96
RFFL-205ENST00000415395 GSX1Q9H4S2 264 aaPredicted RBP9.04□□□□□ -0.96
RFFL-205ENST00000415395 MRPL36Q9P0J6 103 aaKnown RBP9.04□□□□□ -0.96
RFFL-205ENST00000415395 IGLV11-55A0A075B6I3 123 aa9.03□□□□□ -0.96
RFFL-205ENST00000415395 A0A1B0GUT8 65 aa9.03□□□□□ -0.96
RFFL-205ENST00000415395 SERTM2A0A1B0GWG4 89 aa9.03□□□□□ -0.96
RFFL-205ENST00000415395 SCGB2A1O75556 95 aa9.03□□□□□ -0.96
RFFL-205ENST00000415395 IGHV3-48P01763 117 aa9.03□□□□□ -0.96
RFFL-205ENST00000415395 GATD1Q8NB37 220 aa9.03□□□□□ -0.96
RFFL-205ENST00000415395 ZNF48Q96MX3 618 aaPredicted RBP9.03□□□□□ -0.96
RFFL-205ENST00000415395 UNC79Q9P2D8 2635 aa9.03□□□□□ -0.96
RFFL-205ENST00000415395 PDZD2O15018 2839 aa9.03□□□□□ -0.96
RFFL-205ENST00000415395 FBLL1A6NHQ2 334 aaKnown RBP9.02□□□□□ -0.96
RFFL-205ENST00000415395 K7EIM0 57 aa9.02□□□□□ -0.96
RFFL-205ENST00000415395 NDUFB8O95169 186 aa9.02□□□□□ -0.96
RFFL-205ENST00000415395 IGLC1P0CG04 106 aa9.02□□□□□ -0.96
RFFL-205ENST00000415395 S100A7P31151 101 aa9.02□□□□□ -0.96
RFFL-205ENST00000415395 CSN1S1P47710 185 aa9.02□□□□□ -0.96
RFFL-205ENST00000415395 RPS20P60866 119 aaKnown RBP9.02□□□□□ -0.96
RFFL-205ENST00000415395 TMEM219Q86XT9 240 aa9.02□□□□□ -0.96
RFFL-205ENST00000415395 GTSF1Q8WW33 167 aa9.02□□□□□ -0.96
RFFL-205ENST00000415395 FANCD2OSQ96PS1 177 aa9.02□□□□□ -0.96
RFFL-205ENST00000415395 SLC25A39Q9BZJ4 359 aaPredicted RBP9.02□□□□□ -0.96
RFFL-205ENST00000415395 CLEC5AQ9NY25 188 aa9.02□□□□□ -0.96
RFFL-205ENST00000415395 TRAV30A0A087WSZ9 112 aa9.02□□□□□ -0.97
RFFL-205ENST00000415395 ATP6V0E1O15342 81 aa9.02□□□□□ -0.97
RFFL-205ENST00000415395 CT45A10P0DMU9 189 aa9.02□□□□□ -0.97
RFFL-205ENST00000415395 DEFB112Q30KQ8 113 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms