RNA–Protein interactions for RNA: ENST00000414174.1

SF3B1-203, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 593 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-203ENST00000414174 CCL14Q16627 93 aa2.66□□□□□ -1.98
SF3B1-203ENST00000414174 RSPO1Q2MKA7 263 aaPredicted RBP2.66□□□□□ -1.98
SF3B1-203ENST00000414174 GUSBP11Q6P575 273 aa2.66□□□□□ -1.98
SF3B1-203ENST00000414174 SCXQ7RTU7 201 aa2.66□□□□□ -1.98
SF3B1-203ENST00000414174 TOMM5Q8N4H5 51 aa2.66□□□□□ -1.98
SF3B1-203ENST00000414174 CD177Q8N6Q3 437 aa2.66□□□□□ -1.98
SF3B1-203ENST00000414174 Q8N8P6 123 aa2.66□□□□□ -1.98
SF3B1-203ENST00000414174 CYB561D1Q8N8Q1 229 aa2.66□□□□□ -1.98
SF3B1-203ENST00000414174 WFDC5Q8TCV5 224 aa2.66□□□□□ -1.98
SF3B1-203ENST00000414174 MSRB1Q9NZV6 116 aa2.66□□□□□ -1.98
SF3B1-203ENST00000414174 TP53TG3Q9ULZ0 132 aa2.66□□□□□ -1.98
SF3B1-203ENST00000414174 TOP2BQ02880 1626 aa2.66□□□□□ -1.98
SF3B1-203ENST00000414174 TSPOAP1O95153 1857 aa2.66□□□□□ -1.98
SF3B1-203ENST00000414174 NUP205Q92621 2012 aa2.66□□□□□ -1.98
SF3B1-203ENST00000414174 MYH8P13535 1937 aa2.66□□□□□ -1.98
SF3B1-203ENST00000414174 FNDC1Q4ZHG4 1894 aaPredicted RBP2.65□□□□□ -1.98
SF3B1-203ENST00000414174 PLXNA4Q9HCM2 1894 aa2.65□□□□□ -1.98
SF3B1-203ENST00000414174 KIF26AQ9ULI4 1882 aaPredicted RBP2.65□□□□□ -1.98
SF3B1-203ENST00000414174 PHF3Q92576 2039 aaKnown RBP2.65□□□□□ -1.99
SF3B1-203ENST00000414174 DOCK6Q96HP0 2047 aa2.65□□□□□ -1.99
SF3B1-203ENST00000414174 CCDC88CQ9P219 2028 aa2.65□□□□□ -1.99
SF3B1-203ENST00000414174 IGLV3-10A0A075B6K4 115 aa2.65□□□□□ -1.99
SF3B1-203ENST00000414174 A0A087X002 238 aa2.65□□□□□ -1.99
SF3B1-203ENST00000414174 IGHV1-45A0A0A0MS14 117 aa2.65□□□□□ -1.99
SF3B1-203ENST00000414174 E7EQL1 145 aa2.65□□□□□ -1.99
SF3B1-203ENST00000414174 SERF1AO75920 110 aa2.65□□□□□ -1.99
SF3B1-203ENST00000414174 IGLV2-8P01709 118 aa2.65□□□□□ -1.99
SF3B1-203ENST00000414174 IGHV4-39P01824 125 aa2.65□□□□□ -1.99
SF3B1-203ENST00000414174 ACYP1P07311 99 aa2.65□□□□□ -1.99
SF3B1-203ENST00000414174 ASAH2BP0C7U1 165 aa2.65□□□□□ -1.99
SF3B1-203ENST00000414174 IGHV4-38-2P0DP08 117 aa2.65□□□□□ -1.99
SF3B1-203ENST00000414174 CXCL8P10145 99 aa2.65□□□□□ -1.99
SF3B1-203ENST00000414174 CXCL17Q6UXB2 119 aa2.65□□□□□ -1.99
SF3B1-203ENST00000414174 ATP11AUNQ6ZP68 121 aa2.65□□□□□ -1.99
SF3B1-203ENST00000414174 RPL36ALQ969Q0 106 aaKnown RBP2.65□□□□□ -1.99
SF3B1-203ENST00000414174 NPCDR1Q9BY65 106 aa2.65□□□□□ -1.99
SF3B1-203ENST00000414174 Q9H3A6 140 aa2.65□□□□□ -1.99
SF3B1-203ENST00000414174 HIGD1BQ9P298 99 aa2.65□□□□□ -1.99
SF3B1-203ENST00000414174 TRAPPC1Q9Y5R8 145 aa2.65□□□□□ -1.99
SF3B1-203ENST00000414174 MAST1Q9Y2H9 1570 aa2.65□□□□□ -1.99
SF3B1-203ENST00000414174 KMT2EQ8IZD2 1858 aa2.65□□□□□ -1.99
SF3B1-203ENST00000414174 KDM3BQ7LBC6 1761 aa2.64□□□□□ -1.99
SF3B1-203ENST00000414174 TRGV8A0A0C4DH27 118 aa2.64□□□□□ -1.99
SF3B1-203ENST00000414174 CYSRT1A8MQ03 144 aa2.64□□□□□ -1.99
SF3B1-203ENST00000414174 ZNF736B4DX44 427 aaPredicted RBP2.64□□□□□ -1.99
SF3B1-203ENST00000414174 F2Z2F3 143 aa2.64□□□□□ -1.99
SF3B1-203ENST00000414174 K7EQD1 137 aa2.64□□□□□ -1.99
SF3B1-203ENST00000414174 K7EQG2 157 aa2.64□□□□□ -1.99
SF3B1-203ENST00000414174 CCKP06307 115 aa2.64□□□□□ -1.99
SF3B1-203ENST00000414174 IGKV2-30P06310 120 aa2.64□□□□□ -1.99
SF3B1-203ENST00000414174 UBE2AP49459 152 aa2.64□□□□□ -1.99
SF3B1-203ENST00000414174 BLCAPP62952 87 aa2.64□□□□□ -1.99
SF3B1-203ENST00000414174 DAZAP2Q15038 168 aaPredicted RBP2.64□□□□□ -1.99
SF3B1-203ENST00000414174 TWIST1Q15672 202 aa2.64□□□□□ -1.99
SF3B1-203ENST00000414174 LPAL2Q16609 132 aa2.64□□□□□ -1.99
SF3B1-203ENST00000414174 C17orf58Q2M2W7 97 aa2.64□□□□□ -1.99
SF3B1-203ENST00000414174 ADAMTSL4-AS1Q5T5F5 129 aa2.64□□□□□ -1.99
SF3B1-203ENST00000414174 ZFP2Q6ZN57 461 aa2.64□□□□□ -1.99
SF3B1-203ENST00000414174 RNASE6Q93091 150 aaKnown RBP2.64□□□□□ -1.99
SF3B1-203ENST00000414174 FAM104AQ969W3 186 aa2.64□□□□□ -1.99
SF3B1-203ENST00000414174 CLEC7AQ9BXN2 247 aa2.64□□□□□ -1.99
SF3B1-203ENST00000414174 GABARAPL1Q9H0R8 117 aa2.64□□□□□ -1.99
SF3B1-203ENST00000414174 NXT2Q9NPJ8 142 aaKnown RBP2.64□□□□□ -1.99
SF3B1-203ENST00000414174 IL36BQ9NZH7 164 aa2.64□□□□□ -1.99
SF3B1-203ENST00000414174 ZNF580Q9UK33 172 aa2.64□□□□□ -1.99
SF3B1-203ENST00000414174 ABCC8Q09428 1581 aa2.64□□□□□ -1.99
SF3B1-203ENST00000414174 NWD2Q9ULI1 1742 aa2.64□□□□□ -1.99
SF3B1-203ENST00000414174 HELZP42694 1942 aaKnown RBP2.64□□□□□ -1.99
SF3B1-203ENST00000414174 RLFQ13129 1914 aa2.64□□□□□ -1.99
SF3B1-203ENST00000414174 MYO18AQ92614 2054 aaKnown RBP2.64□□□□□ -1.99
SF3B1-203ENST00000414174 ROBO1Q9Y6N7 1651 aa2.63□□□□□ -1.99
SF3B1-203ENST00000414174 SMCHD1A6NHR9 2005 aa2.63□□□□□ -1.99
SF3B1-203ENST00000414174 ARHGEF5Q12774 1597 aa2.63□□□□□ -1.99
SF3B1-203ENST00000414174 CEP170Q5SW79 1584 aa2.63□□□□□ -1.99
SF3B1-203ENST00000414174 MROH2BQ7Z745 1585 aa2.63□□□□□ -1.99
SF3B1-203ENST00000414174 IGLV5-45A0A087WSX0 123 aa2.63□□□□□ -1.99
SF3B1-203ENST00000414174 IGHV3-38A0A0C4DH36 116 aa2.63□□□□□ -1.99
SF3B1-203ENST00000414174 A6NN06 94 aa2.63□□□□□ -1.99
SF3B1-203ENST00000414174 BCE1O60756 84 aa2.63□□□□□ -1.99
SF3B1-203ENST00000414174 APCSP02743 223 aa2.63□□□□□ -1.99
SF3B1-203ENST00000414174 PRSS1P07477 247 aa2.63□□□□□ -1.99
SF3B1-203ENST00000414174 PRSS2P07478 247 aa2.63□□□□□ -1.99
SF3B1-203ENST00000414174 PIPP12273 146 aaPredicted RBP2.63□□□□□ -1.99
SF3B1-203ENST00000414174 CRIP2P52943 208 aaPredicted RBP2.63□□□□□ -1.99
SF3B1-203ENST00000414174 DSCR4P56555 118 aaPredicted RBP2.63□□□□□ -1.99
SF3B1-203ENST00000414174 PCBD1P61457 104 aa2.63□□□□□ -1.99
SF3B1-203ENST00000414174 CYCSP99999 105 aaKnown RBP2.63□□□□□ -1.99
SF3B1-203ENST00000414174 INSL4Q14641 139 aa2.63□□□□□ -1.99
SF3B1-203ENST00000414174 ASB16-AS1Q495Z4 193 aa2.63□□□□□ -1.99
SF3B1-203ENST00000414174 DEFB121Q5J5C9 76 aa2.63□□□□□ -1.99
SF3B1-203ENST00000414174 TMEM170BQ5T4T1 132 aa2.63□□□□□ -1.99
SF3B1-203ENST00000414174 Q6P435 159 aa2.63□□□□□ -1.99
SF3B1-203ENST00000414174 C18orf65Q6ZTR6 163 aa2.63□□□□□ -1.99
SF3B1-203ENST00000414174 LINC00643Q86TS7 51 aa2.63□□□□□ -1.99
SF3B1-203ENST00000414174 ITLN1Q8WWA0 313 aa2.63□□□□□ -1.99
SF3B1-203ENST00000414174 ITLN2Q8WWU7 325 aaPredicted RBP2.63□□□□□ -1.99
SF3B1-203ENST00000414174 SPTSSAQ969W0 71 aa2.63□□□□□ -1.99
SF3B1-203ENST00000414174 ZNF714Q96N38 554 aa2.63□□□□□ -1.99
SF3B1-203ENST00000414174 SLC25A2Q9BXI2 301 aa2.63□□□□□ -1.99
SF3B1-203ENST00000414174 CCL28Q9NRJ3 127 aa2.63□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms