RNA–Protein interactions for RNA: ENST00000412615.6

TRAFD1-202, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRAFD1, Length 2,697 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-202ENST00000412615 PIP4P2Q8N4L2 257 aa8.93□□□□□ -0.98
TRAFD1-202ENST00000412615 RNF224P0DH78 156 aa8.93□□□□□ -0.98
TRAFD1-202ENST00000412615 PRR25Q96S07 402 aa8.93□□□□□ -0.98
TRAFD1-202ENST00000412615 UQCR10Q9UDW1 63 aa8.93□□□□□ -0.98
TRAFD1-202ENST00000412615 IGKV2-40A0A087WW87 121 aaPredicted RBP8.92□□□□□ -0.98
TRAFD1-202ENST00000412615 M0QZ24 198 aa8.92□□□□□ -0.98
TRAFD1-202ENST00000412615 IGKV2D-40P01614 121 aaPredicted RBP8.92□□□□□ -0.98
TRAFD1-202ENST00000412615 LCN12Q6JVE5 192 aa8.92□□□□□ -0.98
TRAFD1-202ENST00000412615 TMEM70Q9BUB7 260 aa8.92□□□□□ -0.98
TRAFD1-202ENST00000412615 TPPP3Q9BW30 176 aa8.92□□□□□ -0.98
TRAFD1-202ENST00000412615 IGHV3-35A0A0C4DH35 117 aa8.92□□□□□ -0.98
TRAFD1-202ENST00000412615 SH2D1AO60880 128 aa8.92□□□□□ -0.98
TRAFD1-202ENST00000412615 OR5AL1P0C617 328 aa8.92□□□□□ -0.98
TRAFD1-202ENST00000412615 ZFAND3Q9H8U3 227 aa8.92□□□□□ -0.98
TRAFD1-202ENST00000412615 SPTBN1Q01082 2364 aaKnown RBP8.92□□□□□ -0.98
TRAFD1-202ENST00000412615 HIVEP3Q5T1R4 2406 aa8.91□□□□□ -0.98
TRAFD1-202ENST00000412615 IGHV1-24A0A0C4DH33 117 aa8.91□□□□□ -0.98
TRAFD1-202ENST00000412615 BUB3O43684 328 aa8.91□□□□□ -0.98
TRAFD1-202ENST00000412615 IGHV4-39P01824 125 aa8.91□□□□□ -0.98
TRAFD1-202ENST00000412615 IGLC3P0DOY3 106 aa8.91□□□□□ -0.98
TRAFD1-202ENST00000412615 BMI1P35226 326 aa8.91□□□□□ -0.98
TRAFD1-202ENST00000412615 EEF1AKMT3Q96AZ1 226 aa8.91□□□□□ -0.98
TRAFD1-202ENST00000412615 IGHV3OR16-8A0A075B7F1 116 aa8.91□□□□□ -0.98
TRAFD1-202ENST00000412615 C20orf202A1L168 122 aa8.91□□□□□ -0.98
TRAFD1-202ENST00000412615 G3V318 75 aa8.91□□□□□ -0.98
TRAFD1-202ENST00000412615 LEPROTL1O95214 131 aa8.91□□□□□ -0.98
TRAFD1-202ENST00000412615 ZNF493Q6ZR52 646 aa8.91□□□□□ -0.98
TRAFD1-202ENST00000412615 C5orf56Q8N8D9 126 aa8.91□□□□□ -0.98
TRAFD1-202ENST00000412615 CLEC5AQ9NY25 188 aa8.91□□□□□ -0.98
TRAFD1-202ENST00000412615 WNK2Q9Y3S1 2297 aa8.91□□□□□ -0.98
TRAFD1-202ENST00000412615 TRAV9-2A0A087WT02 112 aa8.9□□□□□ -0.98
TRAFD1-202ENST00000412615 A0A087X0K7 114 aa8.9□□□□□ -0.98
TRAFD1-202ENST00000412615 TRBV7-1A0A0A6YYK4 115 aa8.9□□□□□ -0.98
TRAFD1-202ENST00000412615 LINC01548A6NM66 108 aa8.9□□□□□ -0.98
TRAFD1-202ENST00000412615 IGHG4P01861 327 aa8.9□□□□□ -0.98
TRAFD1-202ENST00000412615 RPS20P60866 119 aaKnown RBP8.9□□□□□ -0.98
TRAFD1-202ENST00000412615 PAX8Q06710 450 aa8.9□□□□□ -0.98
TRAFD1-202ENST00000412615 CLEC19AQ6UXS0 136 aa8.9□□□□□ -0.98
TRAFD1-202ENST00000412615 ATOH7Q8N100 152 aa8.9□□□□□ -0.98
TRAFD1-202ENST00000412615 CRXO43186 299 aaPredicted RBP8.9□□□□□ -0.98
TRAFD1-202ENST00000412615 LYZL1Q6UWQ5 148 aa8.9□□□□□ -0.98
TRAFD1-202ENST00000412615 SPTBN4Q9H254 2564 aa8.9□□□□□ -0.99
TRAFD1-202ENST00000412615 TMSB15BA0A087X1C1 80 aa8.89□□□□□ -0.99
TRAFD1-202ENST00000412615 TCAPO15273 167 aa8.89□□□□□ -0.99
TRAFD1-202ENST00000412615 IGFL4Q6B9Z1 124 aa8.89□□□□□ -0.99
TRAFD1-202ENST00000412615 CCDC140Q96MF4 163 aa8.89□□□□□ -0.99
TRAFD1-202ENST00000412615 VGLL1Q99990 258 aa8.89□□□□□ -0.99
TRAFD1-202ENST00000412615 HLA-DMBP28068 263 aa8.89□□□□□ -0.99
TRAFD1-202ENST00000412615 ZNF138P52744 262 aa8.89□□□□□ -0.99
TRAFD1-202ENST00000412615 Q6ZN92 141 aa8.89□□□□□ -0.99
TRAFD1-202ENST00000412615 SLC50A1Q9BRV3 221 aa8.89□□□□□ -0.99
TRAFD1-202ENST00000412615 PIMREGQ9BSJ6 248 aa8.89□□□□□ -0.99
TRAFD1-202ENST00000412615 MOB4Q9Y3A3 225 aa8.89□□□□□ -0.99
TRAFD1-202ENST00000412615 SYS1-DBNDD2H3BUS1 97 aa8.88□□□□□ -0.99
TRAFD1-202ENST00000412615 RPLP1P05386 114 aaKnown RBP8.88□□□□□ -0.99
TRAFD1-202ENST00000412615 CSN3P07498 182 aa8.88□□□□□ -0.99
TRAFD1-202ENST00000412615 Q8TAT8 98 aa8.88□□□□□ -0.99
TRAFD1-202ENST00000412615 HSPB8Q9UJY1 196 aa8.88□□□□□ -0.99
TRAFD1-202ENST00000412615 IGHV1-69DA0A0B4J2H0 117 aa8.88□□□□□ -0.99
TRAFD1-202ENST00000412615 IGHV1-69P01742 117 aa8.88□□□□□ -0.99
TRAFD1-202ENST00000412615 HNRNPA3P51991 378 aaKnown RBP8.88□□□□□ -0.99
TRAFD1-202ENST00000412615 SRSF2Q01130 221 aaKnown RBP8.88□□□□□ -0.99
TRAFD1-202ENST00000412615 ATP5G2Q06055 141 aa8.88□□□□□ -0.99
TRAFD1-202ENST00000412615 METTL26Q96S19 204 aa8.88□□□□□ -0.99
TRAFD1-202ENST00000412615 ATP6V0BQ99437 205 aa8.88□□□□□ -0.99
TRAFD1-202ENST00000412615 MAP1LC3CQ9BXW4 147 aa8.88□□□□□ -0.99
TRAFD1-202ENST00000412615 AP5S1Q9NUS5 200 aa8.88□□□□□ -0.99
TRAFD1-202ENST00000412615 MED13LQ71F56 2210 aa8.88□□□□□ -0.99
TRAFD1-202ENST00000412615 CLPSL1A2RUU4 121 aa8.87□□□□□ -0.99
TRAFD1-202ENST00000412615 RBAKDNA6NC62 111 aa8.87□□□□□ -0.99
TRAFD1-202ENST00000412615 FAM104BQ5XKR9 115 aa8.87□□□□□ -0.99
TRAFD1-202ENST00000412615 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.87□□□□□ -0.99
TRAFD1-202ENST00000412615 TMEM219Q86XT9 240 aa8.87□□□□□ -0.99
TRAFD1-202ENST00000412615 PRSS3P2Q8NHM4 247 aa8.87□□□□□ -0.99
TRAFD1-202ENST00000412615 TRAV41A0A0B4J266 112 aa8.87□□□□□ -0.99
TRAFD1-202ENST00000412615 FABP5P3A8MUU1 101 aa8.87□□□□□ -0.99
TRAFD1-202ENST00000412615 ZNF80P51504 273 aaPredicted RBP8.87□□□□□ -0.99
TRAFD1-202ENST00000412615 IGHV3OR16-10A0A075B7F0 116 aa8.87□□□□□ -0.99
TRAFD1-202ENST00000412615 TMEM213A2RRL7 107 aa8.87□□□□□ -0.99
TRAFD1-202ENST00000412615 OR4C46A6NHA9 309 aa8.87□□□□□ -0.99
TRAFD1-202ENST00000412615 NDUFS8O00217 210 aa8.87□□□□□ -0.99
TRAFD1-202ENST00000412615 PCP4P48539 62 aa8.87□□□□□ -0.99
TRAFD1-202ENST00000412615 BATFQ16520 125 aa8.87□□□□□ -0.99
TRAFD1-202ENST00000412615 CLEC2AQ6UVW9 174 aa8.87□□□□□ -0.99
TRAFD1-202ENST00000412615 LINC00173Q6ZV60 143 aa8.87□□□□□ -0.99
TRAFD1-202ENST00000412615 FA2HQ7L5A8 372 aa8.87□□□□□ -0.99
TRAFD1-202ENST00000412615 SPATA12Q7Z6I5 190 aa8.87□□□□□ -0.99
TRAFD1-202ENST00000412615 FER1L6-AS1Q8NA97 138 aa8.87□□□□□ -0.99
TRAFD1-202ENST00000412615 CCL19Q99731 98 aa8.87□□□□□ -0.99
TRAFD1-202ENST00000412615 IGHV4-61A0A0C4DH41 118 aa8.86□□□□□ -0.99
TRAFD1-202ENST00000412615 IGHV3-66A0A0C4DH42 116 aa8.86□□□□□ -0.99
TRAFD1-202ENST00000412615 FAM223BA6NKX1 122 aa8.86□□□□□ -0.99
TRAFD1-202ENST00000412615 IGLL1P15814 213 aa8.86□□□□□ -0.99
TRAFD1-202ENST00000412615 PET117Q6UWS5 81 aa8.86□□□□□ -0.99
TRAFD1-202ENST00000412615 FAM223AQ8IWN6 122 aa8.86□□□□□ -0.99
TRAFD1-202ENST00000412615 TMEM191AQ9H0A3 160 aa8.86□□□□□ -0.99
TRAFD1-202ENST00000412615 MEGF9Q9H1U4 602 aa8.86□□□□□ -0.99
TRAFD1-202ENST00000412615 U3KQK5 164 aa8.86□□□□□ -0.99
TRAFD1-202ENST00000412615 PRAC2D3DTV9 90 aa8.86□□□□□ -0.99
TRAFD1-202ENST00000412615 ORM1P02763 201 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms