RNA–Protein interactions for RNA: ENST00000405375.5

CDKN1A-203, Transcript of cyclin dependent kinase inhibitor 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKN1A, Length 2,267 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1A-203ENST00000405375 RIGQ13278 110 aa12.6□□□□□ -0.39
CDKN1A-203ENST00000405375 SPTAN1Q13813 2472 aaKnown RBP12.6□□□□□ -0.39
CDKN1A-203ENST00000405375 A0A1B0GW15 77 aa12.59□□□□□ -0.39
CDKN1A-203ENST00000405375 G3V318 75 aa12.59□□□□□ -0.39
CDKN1A-203ENST00000405375 BTF3P20290 206 aaKnown RBP12.59□□□□□ -0.39
CDKN1A-203ENST00000405375 NUTF2P61970 127 aaKnown RBP12.59□□□□□ -0.39
CDKN1A-203ENST00000405375 CCDC140Q96MF4 163 aa12.59□□□□□ -0.39
CDKN1A-203ENST00000405375 PRR25Q96S07 402 aa12.59□□□□□ -0.39
CDKN1A-203ENST00000405375 C5orf56Q8N8D9 126 aa12.59□□□□□ -0.39
CDKN1A-203ENST00000405375 IGHV1-24A0A0C4DH33 117 aa12.58□□□□□ -0.4
CDKN1A-203ENST00000405375 FBLL1A6NHQ2 334 aaKnown RBP12.58□□□□□ -0.4
CDKN1A-203ENST00000405375 SH2D1AO60880 128 aa12.58□□□□□ -0.4
CDKN1A-203ENST00000405375 LINC00614P0C842 121 aa12.58□□□□□ -0.4
CDKN1A-203ENST00000405375 S100A7P31151 101 aa12.58□□□□□ -0.4
CDKN1A-203ENST00000405375 PAX8Q06710 450 aa12.58□□□□□ -0.4
CDKN1A-203ENST00000405375 PMCHL1Q16048 86 aa12.58□□□□□ -0.4
CDKN1A-203ENST00000405375 SAPCD1Q5SSQ6 148 aa12.58□□□□□ -0.4
CDKN1A-203ENST00000405375 BUB3O43684 328 aa12.58□□□□□ -0.4
CDKN1A-203ENST00000405375 DMRTA1Q5VZB9 504 aa12.58□□□□□ -0.4
CDKN1A-203ENST00000405375 IGFL4Q6B9Z1 124 aa12.58□□□□□ -0.4
CDKN1A-203ENST00000405375 CLEC5AQ9NY25 188 aa12.58□□□□□ -0.4
CDKN1A-203ENST00000405375 CLPSL1A2RUU4 121 aa12.57□□□□□ -0.4
CDKN1A-203ENST00000405375 IGLC3P0DOY3 106 aa12.57□□□□□ -0.4
CDKN1A-203ENST00000405375 HLA-DMBP28068 263 aa12.57□□□□□ -0.4
CDKN1A-203ENST00000405375 RELQ04864 619 aaPredicted RBP12.57□□□□□ -0.4
CDKN1A-203ENST00000405375 VGLL1Q99990 258 aa12.57□□□□□ -0.4
CDKN1A-203ENST00000405375 CFAP46Q8IYW2 2715 aa12.57□□□□□ -0.4
CDKN1A-203ENST00000405375 A0A087X0K7 114 aa12.57□□□□□ -0.4
CDKN1A-203ENST00000405375 M0QZK8 103 aa12.57□□□□□ -0.4
CDKN1A-203ENST00000405375 CRXO43186 299 aaPredicted RBP12.57□□□□□ -0.4
CDKN1A-203ENST00000405375 RAB9AP51151 201 aa12.57□□□□□ -0.4
CDKN1A-203ENST00000405375 ZNF493Q6ZR52 646 aa12.57□□□□□ -0.4
CDKN1A-203ENST00000405375 SPATA12Q7Z6I5 190 aa12.57□□□□□ -0.4
CDKN1A-203ENST00000405375 ATOH7Q8N100 152 aa12.57□□□□□ -0.4
CDKN1A-203ENST00000405375 TMEM189A5PLL7 270 aa12.56□□□□□ -0.4
CDKN1A-203ENST00000405375 Q8TAT8 98 aa12.56□□□□□ -0.4
CDKN1A-203ENST00000405375 MAJINQ3KP22 176 aa12.55□□□□□ -0.4
CDKN1A-203ENST00000405375 CLEC19AQ6UXS0 136 aa12.55□□□□□ -0.4
CDKN1A-203ENST00000405375 TMEM70Q9BUB7 260 aa12.55□□□□□ -0.4
CDKN1A-203ENST00000405375 TPPP3Q9BW30 176 aa12.55□□□□□ -0.4
CDKN1A-203ENST00000405375 GOSR1O95249 250 aa12.55□□□□□ -0.4
CDKN1A-203ENST00000405375 ZNF80P51504 273 aaPredicted RBP12.55□□□□□ -0.4
CDKN1A-203ENST00000405375 ZNF138P52744 262 aa12.55□□□□□ -0.4
CDKN1A-203ENST00000405375 LYZL1Q6UWQ5 148 aa12.55□□□□□ -0.4
CDKN1A-203ENST00000405375 PIFOQ8TCI5 191 aa12.55□□□□□ -0.4
CDKN1A-203ENST00000405375 UQCR10Q9UDW1 63 aa12.55□□□□□ -0.4
CDKN1A-203ENST00000405375 C19orf54Q5BKX5 351 aa12.54□□□□□ -0.4
CDKN1A-203ENST00000405375 LINC00173Q6ZV60 143 aa12.54□□□□□ -0.4
CDKN1A-203ENST00000405375 TMEM219Q86XT9 240 aa12.54□□□□□ -0.4
CDKN1A-203ENST00000405375 EEF1AKMT3Q96AZ1 226 aa12.54□□□□□ -0.4
CDKN1A-203ENST00000405375 TMSB15BA0A087X1C1 80 aa12.54□□□□□ -0.4
CDKN1A-203ENST00000405375 TRBV7-1A0A0A6YYK4 115 aa12.54□□□□□ -0.4
CDKN1A-203ENST00000405375 IGHV1-69DA0A0B4J2H0 117 aa12.54□□□□□ -0.4
CDKN1A-203ENST00000405375 IGHV4-61A0A0C4DH41 118 aa12.54□□□□□ -0.4
CDKN1A-203ENST00000405375 LEPROTL1O95214 131 aa12.54□□□□□ -0.4
CDKN1A-203ENST00000405375 IGHV1-69P01742 117 aa12.54□□□□□ -0.4
CDKN1A-203ENST00000405375 CYB5R2Q6BCY4 276 aa12.54□□□□□ -0.4
CDKN1A-203ENST00000405375 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.54□□□□□ -0.4
CDKN1A-203ENST00000405375 ZNF575Q86XF7 245 aa12.54□□□□□ -0.4
CDKN1A-203ENST00000405375 KLHDC1Q8N7A1 406 aa12.54□□□□□ -0.4
CDKN1A-203ENST00000405375 MOB4Q9Y3A3 225 aa12.54□□□□□ -0.4
CDKN1A-203ENST00000405375 VPS13CQ709C8 3753 aa12.53□□□□□ -0.4
CDKN1A-203ENST00000405375 IGHV3OR16-10A0A075B7F0 116 aa12.53□□□□□ -0.4
CDKN1A-203ENST00000405375 TRAV9-2A0A087WT02 112 aa12.53□□□□□ -0.4
CDKN1A-203ENST00000405375 OR5AL1P0C617 328 aa12.53□□□□□ -0.4
CDKN1A-203ENST00000405375 PSMG3-AS1Q96PY0 264 aa12.53□□□□□ -0.4
CDKN1A-203ENST00000405375 TMEM213A2RRL7 107 aa12.52□□□□□ -0.41
CDKN1A-203ENST00000405375 PRAC2D3DTV9 90 aa12.52□□□□□ -0.41
CDKN1A-203ENST00000405375 SYS1-DBNDD2H3BUS1 97 aa12.52□□□□□ -0.41
CDKN1A-203ENST00000405375 BMI1P35226 326 aa12.52□□□□□ -0.41
CDKN1A-203ENST00000405375 CRIP2P52943 208 aaPredicted RBP12.52□□□□□ -0.41
CDKN1A-203ENST00000405375 PIMREGQ9BSJ6 248 aa12.52□□□□□ -0.41
CDKN1A-203ENST00000405375 BRD3OSQ6XYD6 125 aa12.51□□□□□ -0.41
CDKN1A-203ENST00000405375 C10orf105Q8TEF2 133 aa12.51□□□□□ -0.41
CDKN1A-203ENST00000405375 TRAV41A0A0B4J266 112 aa12.51□□□□□ -0.41
CDKN1A-203ENST00000405375 TRAV40A0A0B4J280 105 aa12.51□□□□□ -0.41
CDKN1A-203ENST00000405375 IGHV3-66A0A0C4DH42 116 aa12.51□□□□□ -0.41
CDKN1A-203ENST00000405375 C20orf202A1L168 122 aa12.51□□□□□ -0.41
CDKN1A-203ENST00000405375 CSN3P07498 182 aa12.51□□□□□ -0.41
CDKN1A-203ENST00000405375 IGLC6P0CF74 106 aa12.51□□□□□ -0.41
CDKN1A-203ENST00000405375 FAM104BQ5XKR9 115 aa12.51□□□□□ -0.41
CDKN1A-203ENST00000405375 ATP6V0BQ99437 205 aa12.51□□□□□ -0.41
CDKN1A-203ENST00000405375 SLC50A1Q9BRV3 221 aa12.51□□□□□ -0.41
CDKN1A-203ENST00000405375 U3KQE9 123 aa12.51□□□□□ -0.41
CDKN1A-203ENST00000405375 U3KQK5 164 aa12.51□□□□□ -0.41
CDKN1A-203ENST00000405375 RBAKDNA6NC62 111 aa12.5□□□□□ -0.41
CDKN1A-203ENST00000405375 TCAPO15273 167 aa12.5□□□□□ -0.41
CDKN1A-203ENST00000405375 IGLL1P15814 213 aa12.5□□□□□ -0.41
CDKN1A-203ENST00000405375 RPS20P60866 119 aaKnown RBP12.5□□□□□ -0.41
CDKN1A-203ENST00000405375 SRSF2Q01130 221 aaKnown RBP12.5□□□□□ -0.41
CDKN1A-203ENST00000405375 RNF182Q8N6D2 247 aa12.5□□□□□ -0.41
CDKN1A-203ENST00000405375 CCL19Q99731 98 aa12.5□□□□□ -0.41
CDKN1A-203ENST00000405375 MEGF9Q9H1U4 602 aa12.5□□□□□ -0.41
CDKN1A-203ENST00000405375 AP5S1Q9NUS5 200 aa12.5□□□□□ -0.41
CDKN1A-203ENST00000405375 ZFHX3Q15911 3703 aa12.5□□□□□ -0.41
CDKN1A-203ENST00000405375 IGSF10Q6WRI0 2623 aa12.5□□□□□ -0.41
CDKN1A-203ENST00000405375 ATP5G2Q06055 141 aa12.5□□□□□ -0.41
CDKN1A-203ENST00000405375 ERCC8Q13216 396 aa12.5□□□□□ -0.41
CDKN1A-203ENST00000405375 ACACBO00763 2458 aa12.5□□□□□ -0.41
CDKN1A-203ENST00000405375 IGHV3OR16-13A0A075B7E8 117 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 128.9 ms