RNA–Protein interactions for RNA: ENST00000403904.5

CSNK1E-204, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CSNK1E, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-204ENST00000403904 GDF5OSQ5U4N7 250 aa24.65■■□□□ 1.54
CSNK1E-204ENST00000403904 A0A1W2PRE2 83 aa24.64■■□□□ 1.54
CSNK1E-204ENST00000403904 FAM74A7A6NL05 159 aa24.64■■□□□ 1.54
CSNK1E-204ENST00000403904 K7EIL1 84 aa24.64■■□□□ 1.54
CSNK1E-204ENST00000403904 ACTL10Q5JWF8 245 aa24.64■■□□□ 1.54
CSNK1E-204ENST00000403904 PRELID1Q9Y255 219 aa24.64■■□□□ 1.54
CSNK1E-204ENST00000403904 PRAC2D3DTV9 90 aa24.63■■□□□ 1.53
CSNK1E-204ENST00000403904 SRD5A3Q9H8P0 318 aa24.63■■□□□ 1.53
CSNK1E-204ENST00000403904 GNG13Q9P2W3 67 aa24.63■■□□□ 1.53
CSNK1E-204ENST00000403904 GGTLC3B5MD39 225 aa24.63■■□□□ 1.53
CSNK1E-204ENST00000403904 SUMO1P63165 101 aaKnown RBP24.63■■□□□ 1.53
CSNK1E-204ENST00000403904 LYPD6BQ8NI32 183 aa24.63■■□□□ 1.53
CSNK1E-204ENST00000403904 MRPL53Q96EL3 112 aaKnown RBP24.63■■□□□ 1.53
CSNK1E-204ENST00000403904 PAGE4O60829 102 aa24.62■■□□□ 1.53
CSNK1E-204ENST00000403904 ZNF705DP0CH99 300 aaPredicted RBP24.62■■□□□ 1.53
CSNK1E-204ENST00000403904 ZNF705BP0CI00 300 aaPredicted RBP24.62■■□□□ 1.53
CSNK1E-204ENST00000403904 IGHV4-30-4P0DP06 118 aa24.62■■□□□ 1.53
CSNK1E-204ENST00000403904 FOXI2Q6ZQN5 318 aa24.62■■□□□ 1.53
CSNK1E-204ENST00000403904 SAV1Q9H4B6 383 aaPredicted RBP24.62■■□□□ 1.53
CSNK1E-204ENST00000403904 TUBA4BQ9H853 241 aa24.61■■□□□ 1.53
CSNK1E-204ENST00000403904 PPT1P50897 306 aa24.6■■□□□ 1.53
CSNK1E-204ENST00000403904 CST9LP1Q5W188 147 aa24.6■■□□□ 1.53
CSNK1E-204ENST00000403904 EBLN2Q6P2I7 272 aa24.6■■□□□ 1.53
CSNK1E-204ENST00000403904 A0A0J9YX75 114 aa24.59■■□□□ 1.53
CSNK1E-204ENST00000403904 NMBP08949 121 aa24.59■■□□□ 1.53
CSNK1E-204ENST00000403904 ZNF767PQ75MW2 155 aa24.59■■□□□ 1.53
CSNK1E-204ENST00000403904 CMTM2Q8TAZ6 248 aa24.59■■□□□ 1.53
CSNK1E-204ENST00000403904 SLC25A5P05141 298 aaKnown RBP24.59■■□□□ 1.53
CSNK1E-204ENST00000403904 STHQ8IWL8 128 aa24.59■■□□□ 1.53
CSNK1E-204ENST00000403904 OR8A1Q8NGG7 326 aa24.59■■□□□ 1.53
CSNK1E-204ENST00000403904 RPH3ALQ9UNE2 315 aa24.59■■□□□ 1.53
CSNK1E-204ENST00000403904 MEGF8Q7Z7M0 2845 aa24.59■■□□□ 1.53
CSNK1E-204ENST00000403904 HLA-DRB4P13762 266 aa24.58■■□□□ 1.52
CSNK1E-204ENST00000403904 CSN1S1P47710 185 aa24.58■■□□□ 1.52
CSNK1E-204ENST00000403904 MANBALQ9NQG1 85 aa24.58■■□□□ 1.52
CSNK1E-204ENST00000403904 ARL2-SNX15V9GYD0 113 aa24.58■■□□□ 1.52
CSNK1E-204ENST00000403904 HLA-DRB4X5D2U9 266 aa24.58■■□□□ 1.52
CSNK1E-204ENST00000403904 H3BMM0 161 aa24.57■■□□□ 1.52
CSNK1E-204ENST00000403904 ATP5G3P48201 142 aa24.57■■□□□ 1.52
CSNK1E-204ENST00000403904 GNG5P63218 68 aa24.57■■□□□ 1.52
CSNK1E-204ENST00000403904 DEFA6Q01524 100 aa24.57■■□□□ 1.52
CSNK1E-204ENST00000403904 RXFP4Q8TDU9 374 aa24.57■■□□□ 1.52
CSNK1E-204ENST00000403904 HIST1H1AQ02539 215 aaPredicted RBP24.56■■□□□ 1.52
CSNK1E-204ENST00000403904 C5orf17Q8NAS9 161 aa24.56■■□□□ 1.52
CSNK1E-204ENST00000403904 NKX6-2Q9C056 277 aaPredicted RBP24.56■■□□□ 1.52
CSNK1E-204ENST00000403904 IGKV3-20P01619 116 aa24.55■■□□□ 1.52
CSNK1E-204ENST00000403904 DEFB121Q5J5C9 76 aa24.55■■□□□ 1.52
CSNK1E-204ENST00000403904 OR4B1Q8NGF8 309 aa24.55■■□□□ 1.52
CSNK1E-204ENST00000403904 IGKV2-40A0A087WW87 121 aaPredicted RBP24.54■■□□□ 1.52
CSNK1E-204ENST00000403904 DIRC3C9JPN6 131 aa24.54■■□□□ 1.52
CSNK1E-204ENST00000403904 IGKV2D-40P01614 121 aaPredicted RBP24.54■■□□□ 1.52
CSNK1E-204ENST00000403904 RPL35AP18077 110 aaKnown RBP24.54■■□□□ 1.52
CSNK1E-204ENST00000403904 CNN1P51911 297 aaKnown RBP24.54■■□□□ 1.52
CSNK1E-204ENST00000403904 PMS2P11Q13670 270 aa24.54■■□□□ 1.52
CSNK1E-204ENST00000403904 HAGHQ16775 308 aa24.54■■□□□ 1.52
CSNK1E-204ENST00000403904 RBMY1BA6NDE4 496 aaKnown RBP24.54■■□□□ 1.52
CSNK1E-204ENST00000403904 RBMY1EA6NEQ0 496 aaKnown RBP24.54■■□□□ 1.52
CSNK1E-204ENST00000403904 RBMY1DP0C7P1 496 aaKnown RBP24.54■■□□□ 1.52
CSNK1E-204ENST00000403904 TRPT1Q86TN4 253 aaKnown RBP24.54■■□□□ 1.52
CSNK1E-204ENST00000403904 OR10J6PQ8NGY7 276 aa24.54■■□□□ 1.52
CSNK1E-204ENST00000403904 EPDR1Q9UM22 224 aa24.54■■□□□ 1.52
CSNK1E-204ENST00000403904 IFNA1P01562 189 aa24.53■■□□□ 1.52
CSNK1E-204ENST00000403904 RAB14P61106 215 aa24.53■■□□□ 1.52
CSNK1E-204ENST00000403904 CCDC28AQ8IWP9 274 aa24.53■■□□□ 1.52
CSNK1E-204ENST00000403904 A8MZ25 164 aa24.52■■□□□ 1.52
CSNK1E-204ENST00000403904 C11orf94C9JXX5 98 aa24.51■■□□□ 1.51
CSNK1E-204ENST00000403904 ERCC8Q13216 396 aa24.51■■□□□ 1.51
CSNK1E-204ENST00000403904 GOLT1AQ6ZVE7 132 aa24.51■■□□□ 1.51
CSNK1E-204ENST00000403904 MRAPQ8TCY5 172 aa24.51■■□□□ 1.51
CSNK1E-204ENST00000403904 DUSP14O95147 198 aaKnown RBP24.5■■□□□ 1.51
CSNK1E-204ENST00000403904 TCRAP04437 139 aa24.5■■□□□ 1.51
CSNK1E-204ENST00000403904 BCL2P10415 239 aa24.5■■□□□ 1.51
CSNK1E-204ENST00000403904 ARL6IP6Q8N6S5 226 aa24.5■■□□□ 1.51
CSNK1E-204ENST00000403904 VGLL1Q99990 258 aa24.5■■□□□ 1.51
CSNK1E-204ENST00000403904 LOC102724200A0A096LPH7 203 aaPredicted RBP24.5■■□□□ 1.51
CSNK1E-204ENST00000403904 FRMD6-AS1P0C7T7 363 aa24.5■■□□□ 1.51
CSNK1E-204ENST00000403904 RARRES2Q99969 163 aa24.49■■□□□ 1.51
CSNK1E-204ENST00000403904 NPIPB6E9PJ23 425 aa24.48■■□□□ 1.51
CSNK1E-204ENST00000403904 LINC00322Q6ZN03 302 aaPredicted RBP24.48■■□□□ 1.51
CSNK1E-204ENST00000403904 AGPAT4-IT1Q9H0P7 198 aa24.48■■□□□ 1.51
CSNK1E-204ENST00000403904 ATG101Q9BSB4 218 aa24.47■■□□□ 1.51
CSNK1E-204ENST00000403904 LOC102723971A0A1B0GUV8 181 aa24.46■■□□□ 1.51
CSNK1E-204ENST00000403904 MEF2BQ02080 365 aaPredicted RBP24.46■■□□□ 1.51
CSNK1E-204ENST00000403904 C9orf47Q6ZRZ4 202 aa24.46■■□□□ 1.51
CSNK1E-204ENST00000403904 VAX2Q9UIW0 290 aa24.46■■□□□ 1.51
CSNK1E-204ENST00000403904 RBAKDNA6NC62 111 aa24.46■■□□□ 1.51
CSNK1E-204ENST00000403904 RBFOX3A6NFN3 312 aa24.46■■□□□ 1.51
CSNK1E-204ENST00000403904 A8MTW9 85 aa24.46■■□□□ 1.51
CSNK1E-204ENST00000403904 PEX7O00628 323 aa24.46■■□□□ 1.51
CSNK1E-204ENST00000403904 CLLU1Q5K131 121 aa24.46■■□□□ 1.51
CSNK1E-204ENST00000403904 TRAV8-1A0A0A6YYK1 113 aa24.45■■□□□ 1.5
CSNK1E-204ENST00000403904 AMTNQ6UX39 209 aa24.45■■□□□ 1.5
CSNK1E-204ENST00000403904 CYB561D1Q8N8Q1 229 aa24.45■■□□□ 1.5
CSNK1E-204ENST00000403904 HIST1H2BAQ96A08 127 aa24.45■■□□□ 1.5
CSNK1E-204ENST00000403904 SGK494Q96LW2 274 aa24.45■■□□□ 1.5
CSNK1E-204ENST00000403904 CLUHP3Q96NS8 147 aa24.45■■□□□ 1.5
CSNK1E-204ENST00000403904 SLC35B3Q9H1N7 401 aa24.45■■□□□ 1.5
CSNK1E-204ENST00000403904 RGS13O14921 159 aa24.44■■□□□ 1.5
CSNK1E-204ENST00000403904 TAGLN2P37802 199 aaKnown RBP24.44■■□□□ 1.5
CSNK1E-204ENST00000403904 TMEM78Q5T7P6 136 aa24.44■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms