RNA–Protein interactions for RNA: ENST00000400060.8

PTPRM-203, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 5 BASIC

Gene PTPRM, Length 5,030 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-203ENST00000400060 RNF5Q99942 180 aa8.01□□□□□ -1.13
PTPRM-203ENST00000400060 NDUFA7O95182 113 aa8.01□□□□□ -1.13
PTPRM-203ENST00000400060 IGLV2-8P01709 118 aa8.01□□□□□ -1.13
PTPRM-203ENST00000400060 P0C879 139 aa8.01□□□□□ -1.13
PTPRM-203ENST00000400060 ANXA2RQ3ZCQ2 193 aa8.01□□□□□ -1.13
PTPRM-203ENST00000400060 EXOC3-AS1Q8N2X6 119 aa8.01□□□□□ -1.13
PTPRM-203ENST00000400060 DUSP14O95147 198 aaKnown RBP8.01□□□□□ -1.13
PTPRM-203ENST00000400060 SYNJ2BPP57105 145 aa8.01□□□□□ -1.13
PTPRM-203ENST00000400060 ODF1Q14990 250 aa8.01□□□□□ -1.13
PTPRM-203ENST00000400060 HEATR5BQ9P2D3 2071 aa8□□□□□ -1.13
PTPRM-203ENST00000400060 TRAV8-3A0A0A6YYJ7 113 aa8□□□□□ -1.13
PTPRM-203ENST00000400060 SMIM9A6NGZ8 99 aa8□□□□□ -1.13
PTPRM-203ENST00000400060 SMKR1H3BMG3 65 aa8□□□□□ -1.13
PTPRM-203ENST00000400060 SRSF2Q01130 221 aaKnown RBP8□□□□□ -1.13
PTPRM-203ENST00000400060 GFRALQ6UXV0 394 aa8□□□□□ -1.13
PTPRM-203ENST00000400060 LEAP2Q969E1 77 aa8□□□□□ -1.13
PTPRM-203ENST00000400060 ZC2HC1AQ96GY0 325 aa8□□□□□ -1.13
PTPRM-203ENST00000400060 IGHV1-69DA0A0B4J2H0 117 aa8□□□□□ -1.13
PTPRM-203ENST00000400060 C19orf71A6NCJ1 209 aa8□□□□□ -1.13
PTPRM-203ENST00000400060 FAM90A27PA6NNH2 459 aa8□□□□□ -1.13
PTPRM-203ENST00000400060 NPC2P61916 151 aa8□□□□□ -1.13
PTPRM-203ENST00000400060 ITLN1Q8WWA0 313 aa8□□□□□ -1.13
PTPRM-203ENST00000400060 PRSS22Q9GZN4 317 aa8□□□□□ -1.13
PTPRM-203ENST00000400060 NDUFA4L2Q9NRX3 87 aa8□□□□□ -1.13
PTPRM-203ENST00000400060 TNRC6AQ8NDV7 1962 aaKnown RBP8□□□□□ -1.13
PTPRM-203ENST00000400060 TRBV19A0A075B6N1 114 aa8□□□□□ -1.13
PTPRM-203ENST00000400060 CD24P25063 80 aa8□□□□□ -1.13
PTPRM-203ENST00000400060 NUP210LQ5VU65 1888 aa8□□□□□ -1.13
PTPRM-203ENST00000400060 PSPNO60542 156 aa8□□□□□ -1.13
PTPRM-203ENST00000400060 DEFB124Q8NES8 71 aa8□□□□□ -1.13
PTPRM-203ENST00000400060 M0QXV9 152 aa7.99□□□□□ -1.13
PTPRM-203ENST00000400060 M0R381 172 aa7.99□□□□□ -1.13
PTPRM-203ENST00000400060 SS18L1O75177 396 aaPredicted RBP7.99□□□□□ -1.13
PTPRM-203ENST00000400060 RPUSD1Q9UJJ7 312 aaKnown RBP7.99□□□□□ -1.13
PTPRM-203ENST00000400060 KLK10O43240 276 aa7.99□□□□□ -1.13
PTPRM-203ENST00000400060 FRMD6-AS1P0C7T7 363 aa7.99□□□□□ -1.13
PTPRM-203ENST00000400060 RSPO1Q2MKA7 263 aaPredicted RBP7.99□□□□□ -1.13
PTPRM-203ENST00000400060 FAM214BQ7L5A3 538 aa7.99□□□□□ -1.13
PTPRM-203ENST00000400060 XGP55808 180 aa7.99□□□□□ -1.13
PTPRM-203ENST00000400060 SMIM2Q9BVW6 85 aa7.99□□□□□ -1.13
PTPRM-203ENST00000400060 TRAV13-1A0A0B4J241 112 aa7.98□□□□□ -1.13
PTPRM-203ENST00000400060 C2orf66Q6UXQ4 117 aa7.98□□□□□ -1.13
PTPRM-203ENST00000400060 C21orf62Q9NYP8 219 aa7.98□□□□□ -1.13
PTPRM-203ENST00000400060 OBSL1O75147 1896 aa7.98□□□□□ -1.13
PTPRM-203ENST00000400060 RBMY1FQ15415 496 aaKnown RBP7.98□□□□□ -1.13
PTPRM-203ENST00000400060 HS3ST6Q96QI5 342 aa7.98□□□□□ -1.13
PTPRM-203ENST00000400060 SRRM5B3KS81 715 aa7.98□□□□□ -1.13
PTPRM-203ENST00000400060 NUP210Q8TEM1 1887 aaPredicted RBP7.98□□□□□ -1.13
PTPRM-203ENST00000400060 THSD7BQ9C0I4 1608 aa7.98□□□□□ -1.13
PTPRM-203ENST00000400060 IGHV3-48P01763 117 aa7.98□□□□□ -1.13
PTPRM-203ENST00000400060 P0DMU3 169 aa7.98□□□□□ -1.13
PTPRM-203ENST00000400060 FAM231AP0DMU4 169 aa7.98□□□□□ -1.13
PTPRM-203ENST00000400060 FAM231CP0DMU5 169 aa7.98□□□□□ -1.13
PTPRM-203ENST00000400060 Q6ZR03 302 aa7.98□□□□□ -1.13
PTPRM-203ENST00000400060 DCTN5Q9BTE1 182 aa7.98□□□□□ -1.13
PTPRM-203ENST00000400060 CNTFRP26992 372 aa7.97□□□□□ -1.13
PTPRM-203ENST00000400060 TICRRQ7Z2Z1 1910 aa7.97□□□□□ -1.13
PTPRM-203ENST00000400060 INS-IGF2F8WCM5 200 aa7.97□□□□□ -1.13
PTPRM-203ENST00000400060 OVOL1O14753 267 aa7.97□□□□□ -1.13
PTPRM-203ENST00000400060 LEPROTO15243 131 aa7.97□□□□□ -1.13
PTPRM-203ENST00000400060 COX7A1P24310 79 aa7.97□□□□□ -1.13
PTPRM-203ENST00000400060 FAM120AOSQ5T036 256 aa7.97□□□□□ -1.13
PTPRM-203ENST00000400060 NRGNQ92686 78 aa7.97□□□□□ -1.13
PTPRM-203ENST00000400060 EEF1AKMT3Q96AZ1 226 aa7.97□□□□□ -1.13
PTPRM-203ENST00000400060 IMMP1LQ96LU5 166 aa7.97□□□□□ -1.13
PTPRM-203ENST00000400060 DUX5Q96PT3 197 aa7.97□□□□□ -1.13
PTPRM-203ENST00000400060 LAMTOR3Q9UHA4 124 aa7.97□□□□□ -1.13
PTPRM-203ENST00000400060 CCDC179H3BU77 68 aa7.97□□□□□ -1.13
PTPRM-203ENST00000400060 SUMO2P61956 95 aaKnown RBP7.97□□□□□ -1.13
PTPRM-203ENST00000400060 HIST1H4AP62805 103 aaKnown RBP7.97□□□□□ -1.13
PTPRM-203ENST00000400060 CR1LQ2VPA4 569 aa7.97□□□□□ -1.13
PTPRM-203ENST00000400060 GDF5OSQ5U4N7 250 aa7.97□□□□□ -1.13
PTPRM-203ENST00000400060 TIMM21Q9BVV7 248 aa7.97□□□□□ -1.13
PTPRM-203ENST00000400060 SOCS3O14543 225 aa7.97□□□□□ -1.13
PTPRM-203ENST00000400060 Q6ZT83 130 aa7.97□□□□□ -1.13
PTPRM-203ENST00000400060 NDUFA11Q86Y39 141 aa7.97□□□□□ -1.13
PTPRM-203ENST00000400060 ZNRF1Q8ND25 227 aa7.97□□□□□ -1.13
PTPRM-203ENST00000400060 DOCK11Q5JSL3 2073 aa7.97□□□□□ -1.13
PTPRM-203ENST00000400060 KNCNA6PVL3 124 aa7.96□□□□□ -1.13
PTPRM-203ENST00000400060 HERVK_113P63121 156 aa7.96□□□□□ -1.13
PTPRM-203ENST00000400060 PRR31Q5SQ13 230 aa7.96□□□□□ -1.13
PTPRM-203ENST00000400060 PEMTQ9UBM1 199 aa7.96□□□□□ -1.13
PTPRM-203ENST00000400060 KMT2EQ8IZD2 1858 aa7.96□□□□□ -1.13
PTPRM-203ENST00000400060 J3QQQ9 107 aa7.96□□□□□ -1.13
PTPRM-203ENST00000400060 IL17RELQ6ZVW7 336 aa7.96□□□□□ -1.13
PTPRM-203ENST00000400060 C17orf82Q86X59 251 aaPredicted RBP7.96□□□□□ -1.13
PTPRM-203ENST00000400060 GATD1Q8NB37 220 aa7.96□□□□□ -1.13
PTPRM-203ENST00000400060 CCL17Q92583 94 aa7.96□□□□□ -1.13
PTPRM-203ENST00000400060 FAM167A-AS1Q96KT0 104 aa7.96□□□□□ -1.13
PTPRM-203ENST00000400060 U3KQK5 164 aa7.96□□□□□ -1.13
PTPRM-203ENST00000400060 ARHGEF17Q96PE2 2063 aaPredicted RBP7.96□□□□□ -1.14
PTPRM-203ENST00000400060 TRAV12-3A0A0B4J271 114 aa7.96□□□□□ -1.14
PTPRM-203ENST00000400060 H3BRN7 92 aa7.96□□□□□ -1.14
PTPRM-203ENST00000400060 APELAP0DMC3 54 aa7.96□□□□□ -1.14
PTPRM-203ENST00000400060 V9GYY9 64 aa7.96□□□□□ -1.14
PTPRM-203ENST00000400060 TCL1BO95988 128 aa7.96□□□□□ -1.14
PTPRM-203ENST00000400060 GGNQ86UU5 652 aa7.96□□□□□ -1.14
PTPRM-203ENST00000400060 VPREB3Q9UKI3 123 aa7.96□□□□□ -1.14
PTPRM-203ENST00000400060 FAM240AA0A1B0GVK7 77 aa7.95□□□□□ -1.14
PTPRM-203ENST00000400060 MPDZO75970 2070 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms