RNA–Protein interactions for RNA: ENST00000399603.5

CACNA1C-209, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1C, Length 7,377 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-209ENST00000399603 SPINK13Q1W4C9 94 aa10.17□□□□□ -0.78
CACNA1C-209ENST00000399603 MESP1Q9BRJ9 268 aa10.17□□□□□ -0.78
CACNA1C-209ENST00000399603 IGKV1D-43A0A0B4J1Z2 117 aa10.17□□□□□ -0.78
CACNA1C-209ENST00000399603 ZFP2Q6ZN57 461 aa10.17□□□□□ -0.78
CACNA1C-209ENST00000399603 CCL25O15444 150 aa10.16□□□□□ -0.78
CACNA1C-209ENST00000399603 Q9HAA7 133 aa10.16□□□□□ -0.78
CACNA1C-209ENST00000399603 TRIP12Q14669 1992 aaPredicted RBP10.16□□□□□ -0.78
CACNA1C-209ENST00000399603 IGKV2D-24A0A075B6R9 120 aa10.16□□□□□ -0.78
CACNA1C-209ENST00000399603 WDR83OSQ9Y284 106 aa10.16□□□□□ -0.78
CACNA1C-209ENST00000399603 SHISA3A0PJX4 238 aa10.16□□□□□ -0.78
CACNA1C-209ENST00000399603 CASC2Q6XLA1 102 aa10.16□□□□□ -0.78
CACNA1C-209ENST00000399603 GATA4P43694 442 aa10.16□□□□□ -0.78
CACNA1C-209ENST00000399603 V9GYY9 64 aa10.16□□□□□ -0.78
CACNA1C-209ENST00000399603 LRRC37AA6NMS7 1700 aa10.16□□□□□ -0.78
CACNA1C-209ENST00000399603 QSER1Q2KHR3 1735 aa10.16□□□□□ -0.78
CACNA1C-209ENST00000399603 BVES-AS1Q5T3Y7 98 aa10.16□□□□□ -0.78
CACNA1C-209ENST00000399603 C9orf139Q6ZV77 190 aa10.16□□□□□ -0.78
CACNA1C-209ENST00000399603 XCL1P47992 114 aa10.16□□□□□ -0.78
CACNA1C-209ENST00000399603 NRXN2Q9P2S2 1712 aa10.15□□□□□ -0.78
CACNA1C-209ENST00000399603 ETDCA0A1B0GVM5 59 aa10.15□□□□□ -0.78
CACNA1C-209ENST00000399603 IGHV1-2P23083 117 aa10.15□□□□□ -0.78
CACNA1C-209ENST00000399603 NREPQ16612 68 aa10.15□□□□□ -0.78
CACNA1C-209ENST00000399603 VMO1Q7Z5L0 202 aa10.15□□□□□ -0.78
CACNA1C-209ENST00000399603 FER1L5A0AVI2 2057 aa10.15□□□□□ -0.78
CACNA1C-209ENST00000399603 WIPF3A6NGB9 483 aa10.15□□□□□ -0.78
CACNA1C-209ENST00000399603 TMEM141Q96I45 108 aa10.15□□□□□ -0.78
CACNA1C-209ENST00000399603 C8orf49Q96NF6 230 aa10.15□□□□□ -0.78
CACNA1C-209ENST00000399603 RHPN1-AS1Q9BWJ2 59 aa10.15□□□□□ -0.78
CACNA1C-209ENST00000399603 CACNA1GO43497 2377 aa10.15□□□□□ -0.78
CACNA1C-209ENST00000399603 COX7B2Q8TF08 81 aa10.15□□□□□ -0.79
CACNA1C-209ENST00000399603 HLA-DMBP28068 263 aa10.14□□□□□ -0.79
CACNA1C-209ENST00000399603 VSIG2Q96IQ7 327 aa10.14□□□□□ -0.79
CACNA1C-209ENST00000399603 SH2D6Q7Z4S9 175 aa10.14□□□□□ -0.79
CACNA1C-209ENST00000399603 ZNF837Q96EG3 531 aaPredicted RBP10.14□□□□□ -0.79
CACNA1C-209ENST00000399603 ZNF497Q6ZNH5 498 aa10.14□□□□□ -0.79
CACNA1C-209ENST00000399603 IGF2BP2-AS1Q96M15 143 aa10.14□□□□□ -0.79
CACNA1C-209ENST00000399603 FNDC10F2Z333 226 aa10.14□□□□□ -0.79
CACNA1C-209ENST00000399603 H0Y9J4 135 aa10.14□□□□□ -0.79
CACNA1C-209ENST00000399603 NMSQ5H8A3 153 aa10.14□□□□□ -0.79
CACNA1C-209ENST00000399603 H3BUX3 64 aa10.14□□□□□ -0.79
CACNA1C-209ENST00000399603 CHCHD2Q9Y6H1 151 aaPredicted RBP10.14□□□□□ -0.79
CACNA1C-209ENST00000399603 ATAD5Q96QE3 1844 aa10.14□□□□□ -0.79
CACNA1C-209ENST00000399603 SPTBN2O15020 2390 aa10.14□□□□□ -0.79
CACNA1C-209ENST00000399603 IGHMP01871 453 aa10.13□□□□□ -0.79
CACNA1C-209ENST00000399603 CSRP2Q16527 193 aa10.13□□□□□ -0.79
CACNA1C-209ENST00000399603 TRAV3A0A0B4J244 114 aa10.13□□□□□ -0.79
CACNA1C-209ENST00000399603 LYPD6Q86Y78 171 aa10.13□□□□□ -0.79
CACNA1C-209ENST00000399603 ALPK2Q86TB3 2170 aa10.13□□□□□ -0.79
CACNA1C-209ENST00000399603 NTN3O00634 580 aaPredicted RBP10.13□□□□□ -0.79
CACNA1C-209ENST00000399603 LY6G6FQ5SQ64 297 aa10.13□□□□□ -0.79
CACNA1C-209ENST00000399603 FBLIM1Q8WUP2 373 aa10.13□□□□□ -0.79
CACNA1C-209ENST00000399603 ATOX1O00244 68 aa10.12□□□□□ -0.79
CACNA1C-209ENST00000399603 LY75O60449 1722 aa10.12□□□□□ -0.79
CACNA1C-209ENST00000399603 IGLV3-19P01714 112 aa10.12□□□□□ -0.79
CACNA1C-209ENST00000399603 TRBV7-1A0A0A6YYK4 115 aa10.12□□□□□ -0.79
CACNA1C-209ENST00000399603 TAX1BP3O14907 124 aa10.12□□□□□ -0.79
CACNA1C-209ENST00000399603 SRSF2Q01130 221 aaKnown RBP10.12□□□□□ -0.79
CACNA1C-209ENST00000399603 C4orf48Q5BLP8 95 aa10.12□□□□□ -0.79
CACNA1C-209ENST00000399603 IGHV2-26A0A0B4J1V2 119 aa10.12□□□□□ -0.79
CACNA1C-209ENST00000399603 SDHAF1A6NFY7 115 aa10.12□□□□□ -0.79
CACNA1C-209ENST00000399603 IGHV4-59P01825 116 aa10.12□□□□□ -0.79
CACNA1C-209ENST00000399603 IFI6P09912 130 aa10.12□□□□□ -0.79
CACNA1C-209ENST00000399603 PRR4Q16378 134 aa10.12□□□□□ -0.79
CACNA1C-209ENST00000399603 MRPL35Q9NZE8 188 aaKnown RBP10.12□□□□□ -0.79
CACNA1C-209ENST00000399603 NOTCH3Q9UM47 2321 aa10.12□□□□□ -0.79
CACNA1C-209ENST00000399603 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.12□□□□□ -0.79
CACNA1C-209ENST00000399603 MBD3L4A6NDZ8 208 aaPredicted RBP10.12□□□□□ -0.79
CACNA1C-209ENST00000399603 MBD3L3A6NE82 208 aaPredicted RBP10.12□□□□□ -0.79
CACNA1C-209ENST00000399603 MBD3L5A6NJ08 208 aaPredicted RBP10.12□□□□□ -0.79
CACNA1C-209ENST00000399603 FGF16O43320 207 aa10.12□□□□□ -0.79
CACNA1C-209ENST00000399603 BUB3O43684 328 aa10.12□□□□□ -0.79
CACNA1C-209ENST00000399603 RPP25LQ8N5L8 163 aaKnown RBP10.12□□□□□ -0.79
CACNA1C-209ENST00000399603 MBD3L2Q8NHZ7 208 aaPredicted RBP10.12□□□□□ -0.79
CACNA1C-209ENST00000399603 KLF2Q9Y5W3 355 aaPredicted RBP10.12□□□□□ -0.79
CACNA1C-209ENST00000399603 C3orf22Q8N5N4 141 aa10.11□□□□□ -0.79
CACNA1C-209ENST00000399603 Q6ZVH6 145 aa10.11□□□□□ -0.79
CACNA1C-209ENST00000399603 RMI2Q96E14 147 aa10.11□□□□□ -0.79
CACNA1C-209ENST00000399603 EFNA4P52798 201 aa10.11□□□□□ -0.79
CACNA1C-209ENST00000399603 C12orf74Q32Q52 190 aa10.11□□□□□ -0.79
CACNA1C-209ENST00000399603 OVOL3O00110 214 aa10.11□□□□□ -0.79
CACNA1C-209ENST00000399603 Q6ZQT7 251 aa10.11□□□□□ -0.79
CACNA1C-209ENST00000399603 J3QW42 95 aa10.1□□□□□ -0.79
CACNA1C-209ENST00000399603 IGLV2-23P01705 113 aa10.1□□□□□ -0.79
CACNA1C-209ENST00000399603 RNF166Q96A37 237 aaPredicted RBP10.1□□□□□ -0.79
CACNA1C-209ENST00000399603 ZNF503Q96F45 646 aa10.1□□□□□ -0.79
CACNA1C-209ENST00000399603 J3QQQ9 107 aa10.1□□□□□ -0.79
CACNA1C-209ENST00000399603 TDRD15B5MCY1 1934 aaKnown RBP10.1□□□□□ -0.79
CACNA1C-209ENST00000399603 TRGV9Q99603 122 aa10.1□□□□□ -0.79
CACNA1C-209ENST00000399603 IGHV1-24A0A0C4DH33 117 aa10.1□□□□□ -0.79
CACNA1C-209ENST00000399603 A0A1B0GTI1 187 aa10.1□□□□□ -0.79
CACNA1C-209ENST00000399603 MUC4Q99102 2169 aa10.1□□□□□ -0.79
CACNA1C-209ENST00000399603 MCM3APO60318 1980 aa10.1□□□□□ -0.79
CACNA1C-209ENST00000399603 A0A0J9YY99 117 aa10.1□□□□□ -0.79
CACNA1C-209ENST00000399603 MLANAQ16655 118 aa10.1□□□□□ -0.79
CACNA1C-209ENST00000399603 Q8N8P6 123 aa10.1□□□□□ -0.79
CACNA1C-209ENST00000399603 FLVCR1-AS1Q8TAF5 88 aa10.1□□□□□ -0.79
CACNA1C-209ENST00000399603 CACNA1BQ00975 2339 aa10.1□□□□□ -0.79
CACNA1C-209ENST00000399603 TRBV19A0A075B6N1 114 aa10.09□□□□□ -0.79
CACNA1C-209ENST00000399603 COX8AP10176 69 aa10.09□□□□□ -0.79
CACNA1C-209ENST00000399603 MRPL14Q6P1L8 145 aaKnown RBP10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms