RNA–Protein interactions for RNA: ENST00000399273.5

CCDC144A-206, Transcript of coiled-coil domain containing 144A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC144A, Length 8,686 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-206ENST00000399273 KLF17Q5JT82 389 aaPredicted RBP9.44□□□□□ -0.9
CCDC144A-206ENST00000399273 TSSC4Q9Y5U2 329 aaPredicted RBP9.44□□□□□ -0.9
CCDC144A-206ENST00000399273 DEFB104AQ8WTQ1 72 aa9.43□□□□□ -0.9
CCDC144A-206ENST00000399273 ZNF625Q96I27 306 aaPredicted RBP9.43□□□□□ -0.9
CCDC144A-206ENST00000399273 TMEM243Q9BU79 118 aa9.43□□□□□ -0.9
CCDC144A-206ENST00000399273 TRAV8-1A0A0A6YYK1 113 aa9.43□□□□□ -0.9
CCDC144A-206ENST00000399273 DSCR8Q96T75 97 aa9.43□□□□□ -0.9
CCDC144A-206ENST00000399273 IGHV2-70DA0A0C4DH43 119 aa9.43□□□□□ -0.9
CCDC144A-206ENST00000399273 SIGMAR1Q99720 223 aa9.43□□□□□ -0.9
CCDC144A-206ENST00000399273 I3L3M4 83 aa9.43□□□□□ -0.9
CCDC144A-206ENST00000399273 MMP23AO75900 390 aa9.43□□□□□ -0.9
CCDC144A-206ENST00000399273 LY6HO94772 140 aa9.43□□□□□ -0.9
CCDC144A-206ENST00000399273 TCTEX1D4Q5JR98 221 aa9.43□□□□□ -0.9
CCDC144A-206ENST00000399273 SPATA31B1PQ5VZV4 182 aa9.43□□□□□ -0.9
CCDC144A-206ENST00000399273 PCNX3Q9H6A9 2034 aa9.43□□□□□ -0.9
CCDC144A-206ENST00000399273 EFNA2O43921 213 aa9.43□□□□□ -0.9
CCDC144A-206ENST00000399273 MUC6Q6W4X9 2439 aa9.43□□□□□ -0.9
CCDC144A-206ENST00000399273 FNDC10F2Z333 226 aa9.43□□□□□ -0.9
CCDC144A-206ENST00000399273 SPINK13Q1W4C9 94 aa9.43□□□□□ -0.9
CCDC144A-206ENST00000399273 CR1LQ2VPA4 569 aa9.43□□□□□ -0.9
CCDC144A-206ENST00000399273 UBE2BP63146 152 aa9.42□□□□□ -0.9
CCDC144A-206ENST00000399273 TEX48A0A1B0GUV7 120 aa9.42□□□□□ -0.9
CCDC144A-206ENST00000399273 DKK1O94907 266 aa9.42□□□□□ -0.9
CCDC144A-206ENST00000399273 PMVKQ15126 192 aa9.42□□□□□ -0.9
CCDC144A-206ENST00000399273 FLVCR1-AS1Q8TAF5 88 aa9.42□□□□□ -0.9
CCDC144A-206ENST00000399273 WDR83OSQ9Y284 106 aa9.42□□□□□ -0.9
CCDC144A-206ENST00000399273 A0A0A6YYD4 124 aa9.42□□□□□ -0.9
CCDC144A-206ENST00000399273 PRB4P10163 310 aaPredicted RBP9.42□□□□□ -0.9
CCDC144A-206ENST00000399273 ANXA2RQ3ZCQ2 193 aa9.42□□□□□ -0.9
CCDC144A-206ENST00000399273 C1QL4Q86Z23 238 aa9.42□□□□□ -0.9
CCDC144A-206ENST00000399273 TMEM75Q8N9X5 138 aa9.42□□□□□ -0.9
CCDC144A-206ENST00000399273 GAGE2BQ13066 116 aa9.42□□□□□ -0.9
CCDC144A-206ENST00000399273 GAGE2AQ6NT46 116 aa9.42□□□□□ -0.9
CCDC144A-206ENST00000399273 RNF126Q9BV68 326 aa9.42□□□□□ -0.9
CCDC144A-206ENST00000399273 CT83Q5H943 113 aa9.42□□□□□ -0.9
CCDC144A-206ENST00000399273 LYPD2Q6UXB3 125 aa9.42□□□□□ -0.9
CCDC144A-206ENST00000399273 PCDH15Q96QU1 1955 aa9.42□□□□□ -0.9
CCDC144A-206ENST00000399273 TRAV8-3A0A0A6YYJ7 113 aa9.41□□□□□ -0.9
CCDC144A-206ENST00000399273 NUP35Q8NFH5 326 aa9.41□□□□□ -0.9
CCDC144A-206ENST00000399273 TMEM158Q8WZ71 300 aa9.41□□□□□ -0.9
CCDC144A-206ENST00000399273 MUC4Q99102 2169 aa9.41□□□□□ -0.9
CCDC144A-206ENST00000399273 KLF5Q13887 457 aaPredicted RBP9.41□□□□□ -0.9
CCDC144A-206ENST00000399273 TRAV25A0A0B4J276 109 aa9.41□□□□□ -0.9
CCDC144A-206ENST00000399273 ATP6V0E1O15342 81 aa9.41□□□□□ -0.9
CCDC144A-206ENST00000399273 NDUFS5O43920 106 aa9.41□□□□□ -0.9
CCDC144A-206ENST00000399273 AGMATQ9BSE5 352 aa9.41□□□□□ -0.9
CCDC144A-206ENST00000399273 IGF2BP2-AS1Q96M15 143 aa9.41□□□□□ -0.9
CCDC144A-206ENST00000399273 CRLF1O75462 422 aa9.4□□□□□ -0.9
CCDC144A-206ENST00000399273 ID3Q02535 119 aa9.4□□□□□ -0.9
CCDC144A-206ENST00000399273 GAGE12JA6NER3 117 aa9.4□□□□□ -0.9
CCDC144A-206ENST00000399273 GAGE1Q13065 139 aa9.4□□□□□ -0.9
CCDC144A-206ENST00000399273 GAGE4Q13068 117 aa9.4□□□□□ -0.9
CCDC144A-206ENST00000399273 GAGE5Q13069 117 aa9.4□□□□□ -0.9
CCDC144A-206ENST00000399273 NEGR1Q7Z3B1 354 aa9.4□□□□□ -0.9
CCDC144A-206ENST00000399273 CITED2Q99967 270 aaPredicted RBP9.4□□□□□ -0.9
CCDC144A-206ENST00000399273 CDKN1BP46527 198 aa9.4□□□□□ -0.9
CCDC144A-206ENST00000399273 ANGP03950 147 aaKnown RBP9.4□□□□□ -0.9
CCDC144A-206ENST00000399273 C1orf122Q6ZSJ8 110 aa9.4□□□□□ -0.9
CCDC144A-206ENST00000399273 MPZP25189 248 aa9.4□□□□□ -0.9
CCDC144A-206ENST00000399273 TMEM242Q9NWH2 141 aa9.4□□□□□ -0.9
CCDC144A-206ENST00000399273 TMEM256Q8N2U0 113 aa9.4□□□□□ -0.91
CCDC144A-206ENST00000399273 TMEM141Q96I45 108 aa9.4□□□□□ -0.91
CCDC144A-206ENST00000399273 IGHG3P01860 377 aa9.4□□□□□ -0.91
CCDC144A-206ENST00000399273 SRSF2Q01130 221 aaKnown RBP9.4□□□□□ -0.91
CCDC144A-206ENST00000399273 IGHV3-16A0A0C4DH30 117 aa9.39□□□□□ -0.91
CCDC144A-206ENST00000399273 SOCS3O14543 225 aa9.39□□□□□ -0.91
CCDC144A-206ENST00000399273 GAGE12BA1L429 117 aa9.39□□□□□ -0.91
CCDC144A-206ENST00000399273 GAGE7O76087 117 aa9.39□□□□□ -0.91
CCDC144A-206ENST00000399273 GAGE12FP0CL80 117 aa9.39□□□□□ -0.91
CCDC144A-206ENST00000399273 GAGE12GP0CL81 117 aa9.39□□□□□ -0.91
CCDC144A-206ENST00000399273 GAGE12IP0CL82 117 aa9.39□□□□□ -0.91
CCDC144A-206ENST00000399273 GAS1P54826 345 aa9.39□□□□□ -0.91
CCDC144A-206ENST00000399273 PCP4P48539 62 aa9.39□□□□□ -0.91
CCDC144A-206ENST00000399273 OCIAD2Q56VL3 154 aa9.39□□□□□ -0.91
CCDC144A-206ENST00000399273 ARHGAP32A7KAX9 2087 aa9.39□□□□□ -0.91
CCDC144A-206ENST00000399273 IGKV1D-17A0A075B6S4 117 aa9.39□□□□□ -0.91
CCDC144A-206ENST00000399273 RNF222A6NCQ9 220 aa9.39□□□□□ -0.91
CCDC144A-206ENST00000399273 TAL2Q16559 108 aa9.39□□□□□ -0.91
CCDC144A-206ENST00000399273 LINC00518Q8N0U6 118 aa9.39□□□□□ -0.91
CCDC144A-206ENST00000399273 BCL6BQ8N143 479 aaPredicted RBP9.38□□□□□ -0.91
CCDC144A-206ENST00000399273 GFRA4Q9GZZ7 299 aa9.38□□□□□ -0.91
CCDC144A-206ENST00000399273 hADV29S1A0JD25 119 aa9.38□□□□□ -0.91
CCDC144A-206ENST00000399273 REG4Q9BYZ8 158 aa9.38□□□□□ -0.91
CCDC144A-206ENST00000399273 OTOGLQ3ZCN5 2332 aa9.38□□□□□ -0.91
CCDC144A-206ENST00000399273 TRBV6-6A0A0A6YYG2 114 aa9.38□□□□□ -0.91
CCDC144A-206ENST00000399273 PFN2P35080 140 aa9.38□□□□□ -0.91
CCDC144A-206ENST00000399273 C1orf194Q5T5A4 169 aa9.38□□□□□ -0.91
CCDC144A-206ENST00000399273 TRAV3A0A0B4J244 114 aa9.38□□□□□ -0.91
CCDC144A-206ENST00000399273 CFHR2P36980 270 aa9.38□□□□□ -0.91
CCDC144A-206ENST00000399273 TNRC6BQ9UPQ9 1833 aaKnown RBP9.38□□□□□ -0.91
CCDC144A-206ENST00000399273 GUSBP1Q15486 140 aa9.38□□□□□ -0.91
CCDC144A-206ENST00000399273 ZNF362Q5T0B9 420 aaPredicted RBP9.38□□□□□ -0.91
CCDC144A-206ENST00000399273 SHANK2-AS3Q9BTD1 123 aa9.38□□□□□ -0.91
CCDC144A-206ENST00000399273 C9orf66Q5T8R8 295 aa9.37□□□□□ -0.91
CCDC144A-206ENST00000399273 IGKV1-27A0A075B6S5 117 aa9.37□□□□□ -0.91
CCDC144A-206ENST00000399273 NDUFA4O00483 81 aa9.37□□□□□ -0.91
CCDC144A-206ENST00000399273 MST1P26927 711 aa9.37□□□□□ -0.91
CCDC144A-206ENST00000399273 PRR30Q53SZ7 412 aaPredicted RBP9.37□□□□□ -0.91
CCDC144A-206ENST00000399273 IGKV2D-24A0A075B6R9 120 aa9.37□□□□□ -0.91
CCDC144A-206ENST00000399273 Q6P435 159 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms