RNA–Protein interactions for RNA: ENST00000398868.7

ATL3-201, Transcript of atlastin GTPase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ATL3, Length 7,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-201ENST00000398868 PAX1P15863 534 aa7.6□□□□□ -1.19
ATL3-201ENST00000398868 C14orf178Q8N769 122 aaPredicted RBP7.6□□□□□ -1.19
ATL3-201ENST00000398868 IGKV1-12A0A0C4DH73 117 aa7.6□□□□□ -1.19
ATL3-201ENST00000398868 TINCRA0A1B0GVN0 87 aa7.6□□□□□ -1.19
ATL3-201ENST00000398868 WIPF3A6NGB9 483 aa7.6□□□□□ -1.19
ATL3-201ENST00000398868 C15orf61A6NNL5 157 aa7.6□□□□□ -1.19
ATL3-201ENST00000398868 SH2D1AO60880 128 aa7.6□□□□□ -1.19
ATL3-201ENST00000398868 IGKV1D-12P01611 117 aa7.6□□□□□ -1.19
ATL3-201ENST00000398868 GAGE7O76087 117 aa7.59□□□□□ -1.19
ATL3-201ENST00000398868 GAGE12FP0CL80 117 aa7.59□□□□□ -1.19
ATL3-201ENST00000398868 GAGE12GP0CL81 117 aa7.59□□□□□ -1.19
ATL3-201ENST00000398868 GAGE12IP0CL82 117 aa7.59□□□□□ -1.19
ATL3-201ENST00000398868 HAMPP81172 84 aa7.59□□□□□ -1.19
ATL3-201ENST00000398868 FAM120AOSQ5T036 256 aa7.59□□□□□ -1.19
ATL3-201ENST00000398868 RASL11AQ6T310 242 aa7.59□□□□□ -1.19
ATL3-201ENST00000398868 TRBV24-1A0A075B6N3 115 aa7.59□□□□□ -1.19
ATL3-201ENST00000398868 CD5LO43866 347 aa7.59□□□□□ -1.19
ATL3-201ENST00000398868 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.59□□□□□ -1.19
ATL3-201ENST00000398868 K7ENP7 123 aa7.59□□□□□ -1.19
ATL3-201ENST00000398868 K7EP13 123 aa7.59□□□□□ -1.19
ATL3-201ENST00000398868 SPRY2O43597 315 aa7.59□□□□□ -1.19
ATL3-201ENST00000398868 MORN3Q6PF18 240 aaPredicted RBP7.59□□□□□ -1.19
ATL3-201ENST00000398868 SPSB3Q6PJ21 355 aa7.59□□□□□ -1.19
ATL3-201ENST00000398868 GAGE12HA6NDE8 117 aa7.59□□□□□ -1.19
ATL3-201ENST00000398868 GAGE12JA6NER3 117 aa7.59□□□□□ -1.19
ATL3-201ENST00000398868 C9JQL5 133 aa7.59□□□□□ -1.19
ATL3-201ENST00000398868 BUB1B-PAK6H3BSN5 160 aa7.59□□□□□ -1.19
ATL3-201ENST00000398868 GAGE4Q13068 117 aa7.59□□□□□ -1.19
ATL3-201ENST00000398868 GAGE5Q13069 117 aa7.59□□□□□ -1.19
ATL3-201ENST00000398868 RNASE13Q5GAN3 156 aaKnown RBP7.59□□□□□ -1.19
ATL3-201ENST00000398868 PRSS33Q8NF86 280 aa7.59□□□□□ -1.19
ATL3-201ENST00000398868 TNCP24821 2201 aa7.59□□□□□ -1.19
ATL3-201ENST00000398868 LEPROTO15243 131 aa7.59□□□□□ -1.2
ATL3-201ENST00000398868 IGLV3-19P01714 112 aa7.59□□□□□ -1.2
ATL3-201ENST00000398868 RBM3P98179 157 aaKnown RBP7.59□□□□□ -1.2
ATL3-201ENST00000398868 GAGE6Q13070 117 aa7.59□□□□□ -1.2
ATL3-201ENST00000398868 MRPL23Q16540 153 aaKnown RBP7.59□□□□□ -1.2
ATL3-201ENST00000398868 AMTNQ6UX39 209 aa7.59□□□□□ -1.2
ATL3-201ENST00000398868 ZC2HC1AQ96GY0 325 aa7.59□□□□□ -1.2
ATL3-201ENST00000398868 AGMATQ9BSE5 352 aa7.59□□□□□ -1.2
ATL3-201ENST00000398868 MSMBP08118 114 aa7.58□□□□□ -1.2
ATL3-201ENST00000398868 SMIM20Q8N5G0 67 aa7.58□□□□□ -1.2
ATL3-201ENST00000398868 PCNX2A6NKB5 2137 aa7.58□□□□□ -1.2
ATL3-201ENST00000398868 TRAV25A0A0B4J276 109 aa7.58□□□□□ -1.2
ATL3-201ENST00000398868 K7EMI3 77 aa7.58□□□□□ -1.2
ATL3-201ENST00000398868 SRSF2Q01130 221 aaKnown RBP7.58□□□□□ -1.2
ATL3-201ENST00000398868 LOC102723996A0A087X1L8 192 aa7.58□□□□□ -1.2
ATL3-201ENST00000398868 CFHR2P36980 270 aa7.58□□□□□ -1.2
ATL3-201ENST00000398868 LINC01549A6NIU2 74 aa7.58□□□□□ -1.2
ATL3-201ENST00000398868 MPZP25189 248 aa7.58□□□□□ -1.2
ATL3-201ENST00000398868 TREML4Q6UXN2 200 aa7.58□□□□□ -1.2
ATL3-201ENST00000398868 IGKV1-16P04430 117 aa7.58□□□□□ -1.2
ATL3-201ENST00000398868 DUTP33316 252 aaKnown RBP7.58□□□□□ -1.2
ATL3-201ENST00000398868 A0A0G2JMZ2 1700 aa7.58□□□□□ -1.2
ATL3-201ENST00000398868 LRRC37A2A6NM11 1700 aa7.58□□□□□ -1.2
ATL3-201ENST00000398868 C9orf118A6NHY6 69 aa7.57□□□□□ -1.2
ATL3-201ENST00000398868 YPEL1O60688 119 aa7.57□□□□□ -1.2
ATL3-201ENST00000398868 IGFBP3P17936 291 aaPredicted RBP7.57□□□□□ -1.2
ATL3-201ENST00000398868 TEX43Q6ZNM6 134 aa7.57□□□□□ -1.2
ATL3-201ENST00000398868 YPEL2Q96QA6 119 aa7.57□□□□□ -1.2
ATL3-201ENST00000398868 MED13Q9UHV7 2174 aa7.57□□□□□ -1.2
ATL3-201ENST00000398868 DAD1P61803 113 aa7.57□□□□□ -1.2
ATL3-201ENST00000398868 GAFA1Q96PS6 74 aa7.57□□□□□ -1.2
ATL3-201ENST00000398868 KLF2Q9Y5W3 355 aaPredicted RBP7.57□□□□□ -1.2
ATL3-201ENST00000398868 RLFQ13129 1914 aa7.57□□□□□ -1.2
ATL3-201ENST00000398868 RHPN1-AS1Q9BWJ2 59 aa7.57□□□□□ -1.2
ATL3-201ENST00000398868 ANAPC10Q9UM13 185 aa7.57□□□□□ -1.2
ATL3-201ENST00000398868 UTRNP46939 3433 aa7.57□□□□□ -1.2
ATL3-201ENST00000398868 DEFB4AO15263 64 aa7.57□□□□□ -1.2
ATL3-201ENST00000398868 DTX2Q86UW9 622 aa7.57□□□□□ -1.2
ATL3-201ENST00000398868 RPP25LQ8N5L8 163 aaKnown RBP7.57□□□□□ -1.2
ATL3-201ENST00000398868 HS3ST6Q96QI5 342 aa7.57□□□□□ -1.2
ATL3-201ENST00000398868 ATP6V0E1O15342 81 aa7.57□□□□□ -1.2
ATL3-201ENST00000398868 PMVKQ15126 192 aa7.57□□□□□ -1.2
ATL3-201ENST00000398868 TRAV26-2A0A0B4J265 109 aa7.57□□□□□ -1.2
ATL3-201ENST00000398868 IGHV2-70P01814 119 aa7.56□□□□□ -1.2
ATL3-201ENST00000398868 C6orf226Q5I0X4 101 aa7.56□□□□□ -1.2
ATL3-201ENST00000398868 CACNG8Q8WXS5 425 aa7.56□□□□□ -1.2
ATL3-201ENST00000398868 PLXNA4Q9HCM2 1894 aa7.56□□□□□ -1.2
ATL3-201ENST00000398868 TMEM213A2RRL7 107 aa7.56□□□□□ -1.2
ATL3-201ENST00000398868 FGF6P10767 208 aa7.56□□□□□ -1.2
ATL3-201ENST00000398868 PFN2P35080 140 aa7.56□□□□□ -1.2
ATL3-201ENST00000398868 C20orf204Q6ZNR8 217 aa7.56□□□□□ -1.2
ATL3-201ENST00000398868 TMEM242Q9NWH2 141 aa7.56□□□□□ -1.2
ATL3-201ENST00000398868 WISP1O95388 367 aa7.56□□□□□ -1.2
ATL3-201ENST00000398868 UBE2E1P51965 193 aa7.56□□□□□ -1.2
ATL3-201ENST00000398868 IGF2BP2-AS1Q96M15 143 aa7.56□□□□□ -1.2
ATL3-201ENST00000398868 C8orf49Q96NF6 230 aa7.56□□□□□ -1.2
ATL3-201ENST00000398868 PLXNA3P51805 1871 aa7.56□□□□□ -1.2
ATL3-201ENST00000398868 TRBV6-7A0A0A0MS04 114 aa7.56□□□□□ -1.2
ATL3-201ENST00000398868 F2Z2F3 143 aa7.56□□□□□ -1.2
ATL3-201ENST00000398868 SUPT4H1P63272 117 aaKnown RBP7.56□□□□□ -1.2
ATL3-201ENST00000398868 DUSP14O95147 198 aaKnown RBP7.56□□□□□ -1.2
ATL3-201ENST00000398868 PRIMA1Q86XR5 153 aa7.56□□□□□ -1.2
ATL3-201ENST00000398868 TIMM21Q9BVV7 248 aa7.56□□□□□ -1.2
ATL3-201ENST00000398868 SIGLEC9Q9Y336 463 aa7.56□□□□□ -1.2
ATL3-201ENST00000398868 SLC25A16P16260 332 aa7.56□□□□□ -1.2
ATL3-201ENST00000398868 DSCR9P59020 149 aa7.56□□□□□ -1.2
ATL3-201ENST00000398868 GPR179Q6PRD1 2367 aa7.55□□□□□ -1.2
ATL3-201ENST00000398868 ZFHX2Q9C0A1 2572 aaPredicted RBP7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms