RNA–Protein interactions for RNA: ENST00000397827.7

CHRFAM7A-202, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 5 BASIC

Gene CHRFAM7A, Length 2,794 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-202ENST00000397827 FAM181BA6NEQ2 426 aa14.39□□□□□ -0.11
CHRFAM7A-202ENST00000397827 M0R3E3 92 aa14.39□□□□□ -0.11
CHRFAM7A-202ENST00000397827 CD5LO43866 347 aa14.39□□□□□ -0.11
CHRFAM7A-202ENST00000397827 VPS13CQ709C8 3753 aa14.39□□□□□ -0.11
CHRFAM7A-202ENST00000397827 F8W735 103 aaPredicted RBP14.39□□□□□ -0.11
CHRFAM7A-202ENST00000397827 FOXA3P55318 350 aaPredicted RBP14.39□□□□□ -0.11
CHRFAM7A-202ENST00000397827 UBTD1Q9HAC8 227 aa14.39□□□□□ -0.11
CHRFAM7A-202ENST00000397827 COL12A1Q99715 3063 aa14.39□□□□□ -0.11
CHRFAM7A-202ENST00000397827 ZNF785A8K8V0 405 aa14.38□□□□□ -0.11
CHRFAM7A-202ENST00000397827 HSBP1O75506 76 aa14.38□□□□□ -0.11
CHRFAM7A-202ENST00000397827 OR2J3O76001 311 aa14.38□□□□□ -0.11
CHRFAM7A-202ENST00000397827 CCDC144NLQ6NUI1 221 aa14.38□□□□□ -0.11
CHRFAM7A-202ENST00000397827 SPATA12Q7Z6I5 190 aa14.38□□□□□ -0.11
CHRFAM7A-202ENST00000397827 WI2-2373I1.2A0A1W2PRP0 233 aa14.38□□□□□ -0.11
CHRFAM7A-202ENST00000397827 NPIPB5A8MRT5 1133 aa14.38□□□□□ -0.11
CHRFAM7A-202ENST00000397827 M0R2Z0 102 aa14.38□□□□□ -0.11
CHRFAM7A-202ENST00000397827 MRPS12O15235 138 aaKnown RBP14.38□□□□□ -0.11
CHRFAM7A-202ENST00000397827 MFAP4P55083 255 aa14.38□□□□□ -0.11
CHRFAM7A-202ENST00000397827 CT83Q5H943 113 aa14.38□□□□□ -0.11
CHRFAM7A-202ENST00000397827 SCGB2A2Q13296 93 aa14.37□□□□□ -0.11
CHRFAM7A-202ENST00000397827 RNASEKQ6P5S7 137 aaKnown RBP14.37□□□□□ -0.11
CHRFAM7A-202ENST00000397827 CFAP161Q6P656 301 aa14.37□□□□□ -0.11
CHRFAM7A-202ENST00000397827 ZNF414Q96IQ9 312 aa14.37□□□□□ -0.11
CHRFAM7A-202ENST00000397827 A0A1B0GV72 72 aa14.37□□□□□ -0.11
CHRFAM7A-202ENST00000397827 RBPMS2Q6ZRY4 209 aaKnown RBP14.37□□□□□ -0.11
CHRFAM7A-202ENST00000397827 NPIPB6E9PJ23 425 aa14.36□□□□□ -0.11
CHRFAM7A-202ENST00000397827 SLC25A34Q6PIV7 304 aa14.36□□□□□ -0.11
CHRFAM7A-202ENST00000397827 C1orf122Q6ZSJ8 110 aa14.36□□□□□ -0.11
CHRFAM7A-202ENST00000397827 Q8N6K4 173 aa14.36□□□□□ -0.11
CHRFAM7A-202ENST00000397827 C21orf62Q9NYP8 219 aa14.36□□□□□ -0.11
CHRFAM7A-202ENST00000397827 hDV102S1A0JD36 115 aa14.36□□□□□ -0.11
CHRFAM7A-202ENST00000397827 SMAGPQ0VAQ4 97 aa14.36□□□□□ -0.11
CHRFAM7A-202ENST00000397827 KLF5Q13887 457 aaPredicted RBP14.36□□□□□ -0.11
CHRFAM7A-202ENST00000397827 FAM120AOSQ5T036 256 aa14.36□□□□□ -0.11
CHRFAM7A-202ENST00000397827 TTC9CQ8N5M4 171 aa14.36□□□□□ -0.11
CHRFAM7A-202ENST00000397827 CELSR1Q9NYQ6 3014 aa14.36□□□□□ -0.11
CHRFAM7A-202ENST00000397827 C7orf71A4D174 169 aa14.35□□□□□ -0.11
CHRFAM7A-202ENST00000397827 FAM231BA6NCW3 169 aa14.35□□□□□ -0.11
CHRFAM7A-202ENST00000397827 AZU1P20160 251 aa14.35□□□□□ -0.11
CHRFAM7A-202ENST00000397827 GTSF1LQ9H1H1 148 aa14.35□□□□□ -0.11
CHRFAM7A-202ENST00000397827 SMPXQ9UHP9 88 aa14.35□□□□□ -0.11
CHRFAM7A-202ENST00000397827 IGHV3OR16-8A0A075B7F1 116 aa14.35□□□□□ -0.11
CHRFAM7A-202ENST00000397827 A0A087X0K7 114 aa14.35□□□□□ -0.11
CHRFAM7A-202ENST00000397827 OR4C46A6NHA9 309 aa14.35□□□□□ -0.11
CHRFAM7A-202ENST00000397827 SIRPDQ9H106 197 aa14.35□□□□□ -0.11
CHRFAM7A-202ENST00000397827 PSG8Q9UQ74 426 aa14.35□□□□□ -0.11
CHRFAM7A-202ENST00000397827 IGHV3-35A0A0C4DH35 117 aa14.34□□□□□ -0.11
CHRFAM7A-202ENST00000397827 EGR2P11161 476 aaPredicted RBP14.34□□□□□ -0.11
CHRFAM7A-202ENST00000397827 URB1-AS1Q96HZ7 61 aa14.34□□□□□ -0.11
CHRFAM7A-202ENST00000397827 GFRA4Q9GZZ7 299 aa14.34□□□□□ -0.11
CHRFAM7A-202ENST00000397827 ST20Q9HBF5 79 aa14.34□□□□□ -0.11
CHRFAM7A-202ENST00000397827 IGHV7-81A0A0B4J1V7 117 aa14.34□□□□□ -0.11
CHRFAM7A-202ENST00000397827 UFSP1Q6NVU6 142 aa14.34□□□□□ -0.11
CHRFAM7A-202ENST00000397827 GTF2H5Q6ZYL4 71 aa14.34□□□□□ -0.11
CHRFAM7A-202ENST00000397827 TMEM75Q8N9X5 138 aa14.34□□□□□ -0.11
CHRFAM7A-202ENST00000397827 C2orf70A6NJV1 201 aa14.34□□□□□ -0.11
CHRFAM7A-202ENST00000397827 PSG3Q16557 428 aa14.34□□□□□ -0.11
CHRFAM7A-202ENST00000397827 MINOS1Q5TGZ0 78 aa14.34□□□□□ -0.11
CHRFAM7A-202ENST00000397827 MINOS1-NBL1R4GNA1 71 aa14.34□□□□□ -0.11
CHRFAM7A-202ENST00000397827 SH2D7A6NKC9 451 aaPredicted RBP14.33□□□□□ -0.12
CHRFAM7A-202ENST00000397827 UQCRFS1P47985 274 aa14.33□□□□□ -0.12
CHRFAM7A-202ENST00000397827 CRIP1P50238 77 aa14.33□□□□□ -0.12
CHRFAM7A-202ENST00000397827 EBI3Q14213 229 aa14.33□□□□□ -0.12
CHRFAM7A-202ENST00000397827 Q8N9W7 124 aa14.33□□□□□ -0.12
CHRFAM7A-202ENST00000397827 ATP6V0BQ99437 205 aa14.33□□□□□ -0.12
CHRFAM7A-202ENST00000397827 K7EQM0 130 aa14.32□□□□□ -0.12
CHRFAM7A-202ENST00000397827 LYPD1Q8N2G4 141 aa14.32□□□□□ -0.12
CHRFAM7A-202ENST00000397827 C8orf49Q96NF6 230 aa14.32□□□□□ -0.12
CHRFAM7A-202ENST00000397827 BPESC1Q9GZL8 116 aa14.32□□□□□ -0.12
CHRFAM7A-202ENST00000397827 THYN1Q9P016 225 aa14.32□□□□□ -0.12
CHRFAM7A-202ENST00000397827 SOX21Q9Y651 276 aaPredicted RBP14.32□□□□□ -0.12
CHRFAM7A-202ENST00000397827 OOSP1A8MZH6 123 aa14.32□□□□□ -0.12
CHRFAM7A-202ENST00000397827 CHEK1O14757 476 aa14.32□□□□□ -0.12
CHRFAM7A-202ENST00000397827 OVOL3O00110 214 aa14.31□□□□□ -0.12
CHRFAM7A-202ENST00000397827 APOHP02749 345 aaPredicted RBP14.31□□□□□ -0.12
CHRFAM7A-202ENST00000397827 CTSGP08311 255 aa14.31□□□□□ -0.12
CHRFAM7A-202ENST00000397827 AP1S3Q96PC3 154 aa14.31□□□□□ -0.12
CHRFAM7A-202ENST00000397827 TMEM70Q9BUB7 260 aa14.31□□□□□ -0.12
CHRFAM7A-202ENST00000397827 C19orf84I3L1E1 186 aa14.31□□□□□ -0.12
CHRFAM7A-202ENST00000397827 NEGR1Q7Z3B1 354 aa14.31□□□□□ -0.12
CHRFAM7A-202ENST00000397827 ZNF48Q96MX3 618 aaPredicted RBP14.31□□□□□ -0.12
CHRFAM7A-202ENST00000397827 TMUB1Q9BVT8 246 aa14.31□□□□□ -0.12
CHRFAM7A-202ENST00000397827 AAMDCQ9H7C9 122 aa14.31□□□□□ -0.12
CHRFAM7A-202ENST00000397827 TRBV6-1A0A0K0K1D8 114 aa14.3□□□□□ -0.12
CHRFAM7A-202ENST00000397827 ARMS2P0C7Q2 107 aa14.3□□□□□ -0.12
CHRFAM7A-202ENST00000397827 ECSCRQ19T08 205 aa14.3□□□□□ -0.12
CHRFAM7A-202ENST00000397827 AJUBAQ96IF1 538 aa14.3□□□□□ -0.12
CHRFAM7A-202ENST00000397827 NAA38Q9BRA0 125 aaKnown RBP14.3□□□□□ -0.12
CHRFAM7A-202ENST00000397827 TPPP3Q9BW30 176 aa14.3□□□□□ -0.12
CHRFAM7A-202ENST00000397827 FAM106CPP0CH98 169 aa14.3□□□□□ -0.12
CHRFAM7A-202ENST00000397827 SAA4P35542 130 aa14.3□□□□□ -0.12
CHRFAM7A-202ENST00000397827 RAB9AP51151 201 aa14.3□□□□□ -0.12
CHRFAM7A-202ENST00000397827 EFNA4P52798 201 aa14.3□□□□□ -0.12
CHRFAM7A-202ENST00000397827 IGFL4Q6B9Z1 124 aa14.3□□□□□ -0.12
CHRFAM7A-202ENST00000397827 C1RLQ9NZP8 487 aa14.3□□□□□ -0.12
CHRFAM7A-202ENST00000397827 SCGB1A1P11684 91 aa14.29□□□□□ -0.12
CHRFAM7A-202ENST00000397827 SIGMAR1Q99720 223 aa14.29□□□□□ -0.12
CHRFAM7A-202ENST00000397827 MAP1AP78559 2803 aaPredicted RBP14.29□□□□□ -0.12
CHRFAM7A-202ENST00000397827 PET117Q6UWS5 81 aa14.29□□□□□ -0.12
CHRFAM7A-202ENST00000397827 TRAV26-1A0A087WT03 109 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms