RNA–Protein interactions for RNA: ENST00000397004.8

NUP98-204, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-204ENST00000397004 EGR2P11161 476 aaPredicted RBP10.89□□□□□ -0.67
NUP98-204ENST00000397004 BPIFA4PQ86YQ2 179 aa10.89□□□□□ -0.67
NUP98-204ENST00000397004 Q8NA96 180 aa10.89□□□□□ -0.67
NUP98-204ENST00000397004 Q8TAT8 98 aa10.89□□□□□ -0.67
NUP98-204ENST00000397004 FANCD2OSQ96PS1 177 aa10.89□□□□□ -0.67
NUP98-204ENST00000397004 FAM104BQ5XKR9 115 aa10.88□□□□□ -0.67
NUP98-204ENST00000397004 ADAMTSL5Q6ZMM2 481 aa10.88□□□□□ -0.67
NUP98-204ENST00000397004 OR10AG1Q8NH19 301 aa10.88□□□□□ -0.67
NUP98-204ENST00000397004 HILPDAQ9Y5L2 63 aa10.88□□□□□ -0.67
NUP98-204ENST00000397004 SERTM2A0A1B0GWG4 89 aa10.88□□□□□ -0.67
NUP98-204ENST00000397004 SH2D1AO60880 128 aa10.88□□□□□ -0.67
NUP98-204ENST00000397004 NPYP01303 97 aa10.88□□□□□ -0.67
NUP98-204ENST00000397004 CACNG7P62955 275 aa10.88□□□□□ -0.67
NUP98-204ENST00000397004 CACNA1BQ00975 2339 aa10.88□□□□□ -0.67
NUP98-204ENST00000397004 RIGQ13278 110 aa10.88□□□□□ -0.67
NUP98-204ENST00000397004 TMEM97Q5BJF2 176 aa10.88□□□□□ -0.67
NUP98-204ENST00000397004 GFRALQ6UXV0 394 aa10.88□□□□□ -0.67
NUP98-204ENST00000397004 TTTY13Q9BZ97 58 aa10.88□□□□□ -0.67
NUP98-204ENST00000397004 RALYQ9UKM9 306 aaKnown RBP10.88□□□□□ -0.67
NUP98-204ENST00000397004 CEP295Q9C0D2 2601 aa10.88□□□□□ -0.67
NUP98-204ENST00000397004 COL12A1Q99715 3063 aa10.88□□□□□ -0.67
NUP98-204ENST00000397004 NDPQ00604 133 aa10.88□□□□□ -0.67
NUP98-204ENST00000397004 BOD1L2Q8IYS8 172 aa10.88□□□□□ -0.67
NUP98-204ENST00000397004 SMAD5-AS1Q9Y6J3 95 aa10.88□□□□□ -0.67
NUP98-204ENST00000397004 IGHV3-23P01764 117 aa10.87□□□□□ -0.67
NUP98-204ENST00000397004 FA2HQ7L5A8 372 aa10.87□□□□□ -0.67
NUP98-204ENST00000397004 SCNM1Q9BWG6 230 aa10.87□□□□□ -0.67
NUP98-204ENST00000397004 DKK2Q9UBU2 259 aa10.87□□□□□ -0.67
NUP98-204ENST00000397004 MED13LQ71F56 2210 aa10.87□□□□□ -0.67
NUP98-204ENST00000397004 VGLL1Q99990 258 aa10.87□□□□□ -0.67
NUP98-204ENST00000397004 IGHV3OR16-8A0A075B7F1 116 aa10.87□□□□□ -0.67
NUP98-204ENST00000397004 CFHR4Q92496 578 aa10.87□□□□□ -0.67
NUP98-204ENST00000397004 ABHD17AQ96GS6 310 aa10.86□□□□□ -0.67
NUP98-204ENST00000397004 S100A7P31151 101 aa10.86□□□□□ -0.67
NUP98-204ENST00000397004 PRELID3AQ96N28 172 aa10.86□□□□□ -0.67
NUP98-204ENST00000397004 C18orf15Q96N68 181 aa10.86□□□□□ -0.67
NUP98-204ENST00000397004 IGKV2D-26A0A0A0MRZ7 120 aa10.86□□□□□ -0.67
NUP98-204ENST00000397004 RPS20P60866 119 aaKnown RBP10.86□□□□□ -0.67
NUP98-204ENST00000397004 WNK2Q9Y3S1 2297 aa10.86□□□□□ -0.67
NUP98-204ENST00000397004 TNFRSF14Q92956 283 aa10.85□□□□□ -0.67
NUP98-204ENST00000397004 RNF185Q96GF1 192 aa10.85□□□□□ -0.67
NUP98-204ENST00000397004 DYNLRB1Q9NP97 96 aa10.85□□□□□ -0.67
NUP98-204ENST00000397004 KLRD1Q13241 179 aa10.85□□□□□ -0.67
NUP98-204ENST00000397004 RPEQ96AT9 228 aa10.85□□□□□ -0.67
NUP98-204ENST00000397004 PPIAL4CA0A0B4J2A2 164 aa10.85□□□□□ -0.67
NUP98-204ENST00000397004 NPIPB5A8MRT5 1133 aa10.85□□□□□ -0.67
NUP98-204ENST00000397004 PPIAL4GP0DN37 164 aa10.85□□□□□ -0.67
NUP98-204ENST00000397004 THYN1Q9P016 225 aa10.85□□□□□ -0.67
NUP98-204ENST00000397004 CNIH1O95406 144 aa10.84□□□□□ -0.67
NUP98-204ENST00000397004 CSN1S1P47710 185 aa10.84□□□□□ -0.67
NUP98-204ENST00000397004 PLGLAQ15195 96 aa10.84□□□□□ -0.67
NUP98-204ENST00000397004 DYNAPQ8N1N2 210 aa10.84□□□□□ -0.67
NUP98-204ENST00000397004 NDUFS7O75251 213 aa10.84□□□□□ -0.67
NUP98-204ENST00000397004 GATA1P15976 413 aaPredicted RBP10.84□□□□□ -0.67
NUP98-204ENST00000397004 GRNP28799 593 aaKnown RBP10.84□□□□□ -0.67
NUP98-204ENST00000397004 LGALS9BQ3B8N2 356 aa10.84□□□□□ -0.67
NUP98-204ENST00000397004 LGALS9CQ6DKI2 356 aa10.84□□□□□ -0.67
NUP98-204ENST00000397004 LYPD1Q8N2G4 141 aa10.84□□□□□ -0.67
NUP98-204ENST00000397004 PRR25Q96S07 402 aa10.84□□□□□ -0.67
NUP98-204ENST00000397004 Q6ZQT7 251 aa10.83□□□□□ -0.68
NUP98-204ENST00000397004 PEF1Q9UBV8 284 aaKnown RBP10.83□□□□□ -0.68
NUP98-204ENST00000397004 IGLV11-55A0A075B6I3 123 aa10.83□□□□□ -0.68
NUP98-204ENST00000397004 IGHV3-35A0A0C4DH35 117 aa10.83□□□□□ -0.68
NUP98-204ENST00000397004 H3BUT2 72 aa10.83□□□□□ -0.68
NUP98-204ENST00000397004 K7EMI3 77 aa10.83□□□□□ -0.68
NUP98-204ENST00000397004 ORMDL3Q8N138 153 aa10.83□□□□□ -0.68
NUP98-204ENST00000397004 HHLA3Q9XRX5 114 aa10.83□□□□□ -0.68
NUP98-204ENST00000397004 ANKHD1Q8IWZ3 2542 aaKnown RBP10.82□□□□□ -0.68
NUP98-204ENST00000397004 TMEM189A5PLL7 270 aa10.82□□□□□ -0.68
NUP98-204ENST00000397004 IGLC6P0CF74 106 aa10.82□□□□□ -0.68
NUP98-204ENST00000397004 NHLH1Q02575 133 aa10.82□□□□□ -0.68
NUP98-204ENST00000397004 KIR3DS1Q14943 382 aa10.82□□□□□ -0.68
NUP98-204ENST00000397004 TM4SF20Q53R12 229 aa10.82□□□□□ -0.68
NUP98-204ENST00000397004 PRAC2D3DTV9 90 aa10.82□□□□□ -0.68
NUP98-204ENST00000397004 SMAD7O15105 426 aaKnown RBP10.82□□□□□ -0.68
NUP98-204ENST00000397004 COX8CQ7Z4L0 72 aa10.82□□□□□ -0.68
NUP98-204ENST00000397004 VPS25Q9BRG1 176 aa10.82□□□□□ -0.68
NUP98-204ENST00000397004 RAB37Q96AX2 223 aa10.82□□□□□ -0.68
NUP98-204ENST00000397004 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.81□□□□□ -0.68
NUP98-204ENST00000397004 C9orf118A6NHY6 69 aa10.81□□□□□ -0.68
NUP98-204ENST00000397004 NBASA2RRP1 2371 aa10.81□□□□□ -0.68
NUP98-204ENST00000397004 DPF1Q92782 380 aa10.81□□□□□ -0.68
NUP98-204ENST00000397004 A0A1B0GW15 77 aa10.81□□□□□ -0.68
NUP98-204ENST00000397004 PPIFP30405 207 aaKnown RBP10.81□□□□□ -0.68
NUP98-204ENST00000397004 SEC11AP67812 179 aa10.81□□□□□ -0.68
NUP98-204ENST00000397004 IFI27L1Q96BM0 104 aa10.81□□□□□ -0.68
NUP98-204ENST00000397004 ONECUT1Q9UBC0 465 aa10.81□□□□□ -0.68
NUP98-204ENST00000397004 PRRG2O14669 202 aa10.8□□□□□ -0.68
NUP98-204ENST00000397004 NBR2O15453 112 aa10.8□□□□□ -0.68
NUP98-204ENST00000397004 NDUFA3O95167 84 aa10.8□□□□□ -0.68
NUP98-204ENST00000397004 ERCC8Q13216 396 aa10.8□□□□□ -0.68
NUP98-204ENST00000397004 LINC01560Q8TB33 94 aa10.8□□□□□ -0.68
NUP98-204ENST00000397004 CSTL1Q9H114 145 aa10.8□□□□□ -0.68
NUP98-204ENST00000397004 HBDP02042 147 aa10.8□□□□□ -0.68
NUP98-204ENST00000397004 RIPPLY3P57055 190 aa10.8□□□□□ -0.68
NUP98-204ENST00000397004 Q6AWC8 147 aa10.8□□□□□ -0.68
NUP98-204ENST00000397004 LY6G5BQ8NDX9 201 aa10.8□□□□□ -0.68
NUP98-204ENST00000397004 MEGF9Q9H1U4 602 aa10.8□□□□□ -0.68
NUP98-204ENST00000397004 GAGE10A6NGK3 116 aa10.8□□□□□ -0.68
NUP98-204ENST00000397004 H3BRM9 83 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms