RNA–Protein interactions for RNA: ENST00000396610.6

CMC1-202, Transcript of C-X9-C motif containing 1, humanhuman

TSL 2

Gene CMC1, Length 593 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC1-202ENST00000396610 PLXNA4Q9HCM2 1894 aa0.31□□□□□ -2.36
CMC1-202ENST00000396610 BCL9O00512 1426 aa0.3□□□□□ -2.36
CMC1-202ENST00000396610 FXYD6P3P58550 94 aa0.3□□□□□ -2.36
CMC1-202ENST00000396610 DIAPH2-AS1Q14236 149 aa0.3□□□□□ -2.36
CMC1-202ENST00000396610 RTL8BQ17RB0 113 aa0.3□□□□□ -2.36
CMC1-202ENST00000396610 VMA21Q3ZAQ7 101 aa0.3□□□□□ -2.36
CMC1-202ENST00000396610 LINC00299Q6ZSB3 139 aa0.3□□□□□ -2.36
CMC1-202ENST00000396610 TMED4Q7Z7H5 227 aa0.3□□□□□ -2.36
CMC1-202ENST00000396610 Q86TA4 180 aa0.3□□□□□ -2.36
CMC1-202ENST00000396610 RTL8AQ9BWD3 113 aa0.3□□□□□ -2.36
CMC1-202ENST00000396610 CST11Q9H112 138 aa0.3□□□□□ -2.36
CMC1-202ENST00000396610 PTPRFP10586 1907 aa0.29□□□□□ -2.36
CMC1-202ENST00000396610 PHRF1Q9P1Y6 1649 aaKnown RBP0.29□□□□□ -2.36
CMC1-202ENST00000396610 MFSD11O43934 449 aa0.29□□□□□ -2.36
CMC1-202ENST00000396610 PIAS1O75925 651 aa0.29□□□□□ -2.36
CMC1-202ENST00000396610 CST7O76096 145 aa0.29□□□□□ -2.36
CMC1-202ENST00000396610 BASP1P80723 227 aaKnown RBP0.29□□□□□ -2.36
CMC1-202ENST00000396610 FKBP1CQ5VVH2 108 aa0.29□□□□□ -2.36
CMC1-202ENST00000396610 CROCCP2Q86T23 111 aa0.29□□□□□ -2.36
CMC1-202ENST00000396610 PLAC4Q8WY50 150 aa0.29□□□□□ -2.36
CMC1-202ENST00000396610 RMND5BQ96G75 393 aaPredicted RBP0.29□□□□□ -2.36
CMC1-202ENST00000396610 OR2H1Q9GZK4 316 aa0.29□□□□□ -2.36
CMC1-202ENST00000396610 STOML2Q9UJZ1 356 aa0.29□□□□□ -2.36
CMC1-202ENST00000396610 BDP1A6H8Y1 2624 aa0.29□□□□□ -2.36
CMC1-202ENST00000396610 A0A0J9YY99 117 aa0.28□□□□□ -2.36
CMC1-202ENST00000396610 MT-ND6P03923 174 aa0.28□□□□□ -2.36
CMC1-202ENST00000396610 KRTAP2-3P0C7H8 128 aa0.28□□□□□ -2.36
CMC1-202ENST00000396610 RPL35P42766 123 aaKnown RBP0.28□□□□□ -2.36
CMC1-202ENST00000396610 GNG3P63215 75 aa0.28□□□□□ -2.36
CMC1-202ENST00000396610 LTC4SQ16873 150 aa0.28□□□□□ -2.36
CMC1-202ENST00000396610 SMIM20Q8N5G0 67 aa0.28□□□□□ -2.36
CMC1-202ENST00000396610 NEK7Q8TDX7 302 aa0.28□□□□□ -2.36
CMC1-202ENST00000396610 AP3S1Q92572 193 aa0.28□□□□□ -2.36
CMC1-202ENST00000396610 CCL19Q99731 98 aa0.28□□□□□ -2.36
CMC1-202ENST00000396610 LIMD2Q9BT23 127 aa0.28□□□□□ -2.36
CMC1-202ENST00000396610 KRTAP2-4Q9BYR9 128 aa0.28□□□□□ -2.36
CMC1-202ENST00000396610 KRTAP2-1Q9BYU5 128 aa0.28□□□□□ -2.36
CMC1-202ENST00000396610 TPRKBQ9Y3C4 175 aa0.28□□□□□ -2.36
CMC1-202ENST00000396610 SIP14410 1827 aa0.28□□□□□ -2.36
CMC1-202ENST00000396610 NUP98P52948 1817 aa0.27□□□□□ -2.37
CMC1-202ENST00000396610 H3BQV1 296 aa0.27□□□□□ -2.37
CMC1-202ENST00000396610 CSN2P05814 226 aa0.27□□□□□ -2.37
CMC1-202ENST00000396610 CCL4P13236 92 aa0.27□□□□□ -2.37
CMC1-202ENST00000396610 PDE6GP18545 87 aa0.27□□□□□ -2.37
CMC1-202ENST00000396610 MRPS36P82909 103 aaKnown RBP0.27□□□□□ -2.37
CMC1-202ENST00000396610 POU6F1Q14863 301 aa0.27□□□□□ -2.37
CMC1-202ENST00000396610 LINC00269Q8N2A0 174 aa0.27□□□□□ -2.37
CMC1-202ENST00000396610 PLEKHB2Q96CS7 222 aa0.27□□□□□ -2.37
CMC1-202ENST00000396610 FAM103A1Q9BTL3 118 aaKnown RBP0.27□□□□□ -2.37
CMC1-202ENST00000396610 EFCAB11Q9BUY7 163 aa0.27□□□□□ -2.37
CMC1-202ENST00000396610 LAMTOR3Q9UHA4 124 aa0.27□□□□□ -2.37
CMC1-202ENST00000396610 UFC1Q9Y3C8 167 aa0.27□□□□□ -2.37
CMC1-202ENST00000396610 FANCMQ8IYD8 2048 aa0.26□□□□□ -2.37
CMC1-202ENST00000396610 GLRXP35754 106 aa0.26□□□□□ -2.37
CMC1-202ENST00000396610 TCTAP57738 103 aa0.26□□□□□ -2.37
CMC1-202ENST00000396610 TAS2R41P59536 307 aa0.26□□□□□ -2.37
CMC1-202ENST00000396610 STX19Q8N4C7 294 aa0.26□□□□□ -2.37
CMC1-202ENST00000396610 GRPEL2Q8TAA5 225 aa0.26□□□□□ -2.37
CMC1-202ENST00000396610 CARD19Q96LW7 228 aa0.26□□□□□ -2.37
CMC1-202ENST00000396610 OR4C12Q96R67 309 aa0.26□□□□□ -2.37
CMC1-202ENST00000396610 OTORQ9NRC9 128 aa0.26□□□□□ -2.37
CMC1-202ENST00000396610 MED11Q9P086 117 aa0.26□□□□□ -2.37
CMC1-202ENST00000396610 ERBINQ96RT1 1412 aa0.26□□□□□ -2.37
CMC1-202ENST00000396610 KPNA4O00629 521 aaPredicted RBP0.25□□□□□ -2.37
CMC1-202ENST00000396610 RPL37AP61513 92 aaKnown RBP0.25□□□□□ -2.37
CMC1-202ENST00000396610 CASC2Q6XLA1 102 aa0.25□□□□□ -2.37
CMC1-202ENST00000396610 ZCCHC23Q6ZST2 131 aa0.25□□□□□ -2.37
CMC1-202ENST00000396610 C10orf111Q8N326 155 aa0.25□□□□□ -2.37
CMC1-202ENST00000396610 BORCS8Q96FH0 119 aa0.25□□□□□ -2.37
CMC1-202ENST00000396610 IL20Q9NYY1 176 aa0.25□□□□□ -2.37
CMC1-202ENST00000396610 NAT8BQ9UHF3 227 aa0.25□□□□□ -2.37
CMC1-202ENST00000396610 FAT4Q6V0I7 4981 aa0.25□□□□□ -2.37
CMC1-202ENST00000396610 RTL9Q8NET4 1388 aa0.24□□□□□ -2.37
CMC1-202ENST00000396610 SULT1C4O75897 302 aa0.24□□□□□ -2.37
CMC1-202ENST00000396610 FABP4P15090 132 aa0.24□□□□□ -2.37
CMC1-202ENST00000396610 NEDD8Q15843 81 aa0.24□□□□□ -2.37
CMC1-202ENST00000396610 FAM24BQ8N5W8 94 aa0.24□□□□□ -2.37
CMC1-202ENST00000396610 C5orf17Q8NAS9 161 aa0.24□□□□□ -2.37
CMC1-202ENST00000396610 TSKUQ8WUA8 353 aa0.24□□□□□ -2.37
CMC1-202ENST00000396610 MCEEQ96PE7 176 aa0.24□□□□□ -2.37
CMC1-202ENST00000396610 SYNE2Q8WXH0 6885 aaKnown RBP0.24□□□□□ -2.37
CMC1-202ENST00000396610 COL24A1Q17RW2 1714 aa0.24□□□□□ -2.37
CMC1-202ENST00000396610 CAMSAP1Q5T5Y3 1602 aa0.24□□□□□ -2.37
CMC1-202ENST00000396610 CD109Q6YHK3 1445 aa0.23□□□□□ -2.37
CMC1-202ENST00000396610 IGHV3-30P01768 117 aa0.23□□□□□ -2.37
CMC1-202ENST00000396610 IGHV3-30-5P0DP03 117 aa0.23□□□□□ -2.37
CMC1-202ENST00000396610 LYG2Q86SG7 212 aa0.23□□□□□ -2.37
CMC1-202ENST00000396610 OR4B1Q8NGF8 309 aa0.23□□□□□ -2.37
CMC1-202ENST00000396610 DYDC1Q8WWB3 177 aa0.23□□□□□ -2.37
CMC1-202ENST00000396610 NUBP2Q9Y5Y2 271 aa0.23□□□□□ -2.37
CMC1-202ENST00000396610 NCAPD3P42695 1498 aa0.22□□□□□ -2.37
CMC1-202ENST00000396610 CAMSAP2Q08AD1 1489 aa0.22□□□□□ -2.37
CMC1-202ENST00000396610 EIF3AQ14152 1382 aaKnown RBP0.22□□□□□ -2.37
CMC1-202ENST00000396610 A6NN06 94 aa0.22□□□□□ -2.37
CMC1-202ENST00000396610 C5orf58C9J3I9 102 aa0.22□□□□□ -2.37
CMC1-202ENST00000396610 TRACP01848 142 aa0.22□□□□□ -2.37
CMC1-202ENST00000396610 FABP2P12104 132 aa0.22□□□□□ -2.37
CMC1-202ENST00000396610 PRR15Q8IV56 129 aa0.22□□□□□ -2.37
CMC1-202ENST00000396610 OR5AK2Q8NH90 309 aa0.22□□□□□ -2.37
CMC1-202ENST00000396610 CCL4L1Q8NHW4 92 aa0.22□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms