RNA–Protein interactions for RNA: ENST00000394092.6

SMAD1-202, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD1, Length 1,658 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-202ENST00000394092 ZFAND3Q9H8U3 227 aa5.59□□□□□ -1.51
SMAD1-202ENST00000394092 CLEC5AQ9NY25 188 aa5.59□□□□□ -1.51
SMAD1-202ENST00000394092 RELNP78509 3460 aa5.59□□□□□ -1.51
SMAD1-202ENST00000394092 TRAV41A0A0B4J266 112 aa5.59□□□□□ -1.52
SMAD1-202ENST00000394092 ZNF785A8K8V0 405 aa5.59□□□□□ -1.52
SMAD1-202ENST00000394092 H3BUA1 57 aa5.59□□□□□ -1.52
SMAD1-202ENST00000394092 M0QZK8 103 aa5.59□□□□□ -1.52
SMAD1-202ENST00000394092 BUB3O43684 328 aa5.59□□□□□ -1.52
SMAD1-202ENST00000394092 CLEC3BP05452 202 aa5.59□□□□□ -1.52
SMAD1-202ENST00000394092 C3orf79P0CE67 100 aa5.59□□□□□ -1.52
SMAD1-202ENST00000394092 BTF3P20290 206 aaKnown RBP5.59□□□□□ -1.52
SMAD1-202ENST00000394092 ATP5J2P56134 94 aa5.59□□□□□ -1.52
SMAD1-202ENST00000394092 DSCR9P59020 149 aa5.59□□□□□ -1.52
SMAD1-202ENST00000394092 ATP5G2Q06055 141 aa5.59□□□□□ -1.52
SMAD1-202ENST00000394092 CLEC19AQ6UXS0 136 aa5.59□□□□□ -1.52
SMAD1-202ENST00000394092 FAM19A2Q8N3H0 131 aa5.59□□□□□ -1.52
SMAD1-202ENST00000394092 KLHDC1Q8N7A1 406 aa5.59□□□□□ -1.52
SMAD1-202ENST00000394092 MRPL53Q96EL3 112 aaKnown RBP5.59□□□□□ -1.52
SMAD1-202ENST00000394092 MIEN1Q9BRT3 115 aa5.59□□□□□ -1.52
SMAD1-202ENST00000394092 KRTAP9-2Q9BYQ4 174 aa5.59□□□□□ -1.52
SMAD1-202ENST00000394092 PAM16Q9Y3D7 125 aa5.59□□□□□ -1.52
SMAD1-202ENST00000394092 ABCA2Q9BZC7 2435 aa5.58□□□□□ -1.52
SMAD1-202ENST00000394092 IGKV2-40A0A087WW87 121 aaPredicted RBP5.58□□□□□ -1.52
SMAD1-202ENST00000394092 C20orf202A1L168 122 aa5.58□□□□□ -1.52
SMAD1-202ENST00000394092 M0R143 59 aa5.58□□□□□ -1.52
SMAD1-202ENST00000394092 SH2D1AO60880 128 aa5.58□□□□□ -1.52
SMAD1-202ENST00000394092 IGKV2D-40P01614 121 aaPredicted RBP5.58□□□□□ -1.52
SMAD1-202ENST00000394092 OR5AL1P0C617 328 aa5.58□□□□□ -1.52
SMAD1-202ENST00000394092 ARMS2P0C7Q2 107 aa5.58□□□□□ -1.52
SMAD1-202ENST00000394092 ZNF493Q6ZR52 646 aa5.58□□□□□ -1.52
SMAD1-202ENST00000394092 BCL6BQ8N143 479 aaPredicted RBP5.58□□□□□ -1.52
SMAD1-202ENST00000394092 CCDC140Q96MF4 163 aa5.58□□□□□ -1.52
SMAD1-202ENST00000394092 C8orf49Q96NF6 230 aa5.58□□□□□ -1.52
SMAD1-202ENST00000394092 PRR25Q96S07 402 aa5.58□□□□□ -1.52
SMAD1-202ENST00000394092 SPOCK3Q9BQ16 436 aa5.58□□□□□ -1.52
SMAD1-202ENST00000394092 HIF1ANQ9NWT6 349 aa5.58□□□□□ -1.52
SMAD1-202ENST00000394092 ZMAT5Q9UDW3 170 aaKnown RBP5.58□□□□□ -1.52
SMAD1-202ENST00000394092 TACC2O95359 2948 aa5.58□□□□□ -1.52
SMAD1-202ENST00000394092 IGHV4-61A0A0C4DH41 118 aa5.57□□□□□ -1.52
SMAD1-202ENST00000394092 G3V318 75 aa5.57□□□□□ -1.52
SMAD1-202ENST00000394092 BRI3O95415 125 aa5.57□□□□□ -1.52
SMAD1-202ENST00000394092 MSMBP08118 114 aa5.57□□□□□ -1.52
SMAD1-202ENST00000394092 LINC00614P0C842 121 aa5.57□□□□□ -1.52
SMAD1-202ENST00000394092 CD33P20138 364 aa5.57□□□□□ -1.52
SMAD1-202ENST00000394092 GATA3P23771 443 aa5.57□□□□□ -1.52
SMAD1-202ENST00000394092 CRIP1P50238 77 aa5.57□□□□□ -1.52
SMAD1-202ENST00000394092 SPATA45Q537H7 98 aa5.57□□□□□ -1.52
SMAD1-202ENST00000394092 C19orf54Q5BKX5 351 aa5.57□□□□□ -1.52
SMAD1-202ENST00000394092 ZNF705AQ6ZN79 300 aaPredicted RBP5.57□□□□□ -1.52
SMAD1-202ENST00000394092 Q8N976 141 aa5.57□□□□□ -1.52
SMAD1-202ENST00000394092 TMEM70Q9BUB7 260 aa5.57□□□□□ -1.52
SMAD1-202ENST00000394092 SMAD5-AS1Q9Y6J3 95 aa5.57□□□□□ -1.52
SMAD1-202ENST00000394092 MED13LQ71F56 2210 aa5.57□□□□□ -1.52
SMAD1-202ENST00000394092 IGHV1-24A0A0C4DH33 117 aa5.56□□□□□ -1.52
SMAD1-202ENST00000394092 KRTAP9-6A0A140TA67 174 aa5.56□□□□□ -1.52
SMAD1-202ENST00000394092 LEPROTL1O95214 131 aa5.56□□□□□ -1.52
SMAD1-202ENST00000394092 TRGV3P03979 118 aa5.56□□□□□ -1.52
SMAD1-202ENST00000394092 IGF1P05019 195 aa5.56□□□□□ -1.52
SMAD1-202ENST00000394092 CTRLP40313 264 aa5.56□□□□□ -1.52
SMAD1-202ENST00000394092 AKAP6Q13023 2319 aa5.56□□□□□ -1.52
SMAD1-202ENST00000394092 LCN12Q6JVE5 192 aa5.56□□□□□ -1.52
SMAD1-202ENST00000394092 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa5.56□□□□□ -1.52
SMAD1-202ENST00000394092 PKD1L2Q7Z442 2459 aa5.56□□□□□ -1.52
SMAD1-202ENST00000394092 TMEM219Q86XT9 240 aa5.56□□□□□ -1.52
SMAD1-202ENST00000394092 USMG5Q96IX5 58 aa5.56□□□□□ -1.52
SMAD1-202ENST00000394092 TPPP3Q9BW30 176 aa5.56□□□□□ -1.52
SMAD1-202ENST00000394092 UQCR10Q9UDW1 63 aa5.56□□□□□ -1.52
SMAD1-202ENST00000394092 HSPB8Q9UJY1 196 aa5.56□□□□□ -1.52
SMAD1-202ENST00000394092 RNF114Q9Y508 228 aa5.56□□□□□ -1.52
SMAD1-202ENST00000394092 CACNA1AO00555 2505 aa5.56□□□□□ -1.52
SMAD1-202ENST00000394092 PIEZO1Q92508 2521 aa5.56□□□□□ -1.52
SMAD1-202ENST00000394092 IGHV3OR16-10A0A075B7F0 116 aa5.56□□□□□ -1.52
SMAD1-202ENST00000394092 IGHV3-35A0A0C4DH35 117 aa5.56□□□□□ -1.52
SMAD1-202ENST00000394092 FABP5P3A8MUU1 101 aa5.56□□□□□ -1.52
SMAD1-202ENST00000394092 B4DSR2 109 aa5.56□□□□□ -1.52
SMAD1-202ENST00000394092 NDUFA4O00483 81 aa5.56□□□□□ -1.52
SMAD1-202ENST00000394092 SLC25A16P16260 332 aa5.56□□□□□ -1.52
SMAD1-202ENST00000394092 ARL3P36405 182 aa5.56□□□□□ -1.52
SMAD1-202ENST00000394092 SSTP61278 116 aa5.56□□□□□ -1.52
SMAD1-202ENST00000394092 TMEM78Q5T7P6 136 aa5.56□□□□□ -1.52
SMAD1-202ENST00000394092 LYZL1Q6UWQ5 148 aa5.56□□□□□ -1.52
SMAD1-202ENST00000394092 BRD3OSQ6XYD6 125 aa5.56□□□□□ -1.52
SMAD1-202ENST00000394092 C9orf139Q6ZV77 190 aa5.56□□□□□ -1.52
SMAD1-202ENST00000394092 FA2HQ7L5A8 372 aa5.56□□□□□ -1.52
SMAD1-202ENST00000394092 FER1L6-AS1Q8NA97 138 aa5.56□□□□□ -1.52
SMAD1-202ENST00000394092 ASCL2Q99929 193 aa5.56□□□□□ -1.52
SMAD1-202ENST00000394092 ITPR1Q14643 2758 aa5.55□□□□□ -1.52
SMAD1-202ENST00000394092 IGHV4-30-2A0A087WSY4 118 aa5.55□□□□□ -1.52
SMAD1-202ENST00000394092 A0A0G2JLM5 398 aa5.55□□□□□ -1.52
SMAD1-202ENST00000394092 CLPSL1A2RUU4 121 aa5.55□□□□□ -1.52
SMAD1-202ENST00000394092 A6NDX4 124 aa5.55□□□□□ -1.52
SMAD1-202ENST00000394092 C2orf70A6NJV1 201 aa5.55□□□□□ -1.52
SMAD1-202ENST00000394092 H3BUX3 64 aa5.55□□□□□ -1.52
SMAD1-202ENST00000394092 EREGO14944 169 aa5.55□□□□□ -1.52
SMAD1-202ENST00000394092 CRXO43186 299 aaPredicted RBP5.55□□□□□ -1.52
SMAD1-202ENST00000394092 IGHG2P01859 326 aa5.55□□□□□ -1.52
SMAD1-202ENST00000394092 HIST1H1AQ02539 215 aaPredicted RBP5.55□□□□□ -1.52
SMAD1-202ENST00000394092 LINC01559Q495D7 138 aa5.55□□□□□ -1.52
SMAD1-202ENST00000394092 ORMDL3Q8N138 153 aa5.55□□□□□ -1.52
SMAD1-202ENST00000394092 LINC00469Q8N7U9 141 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 162 ms