RNA–Protein interactions for RNA: ENST00000390964.1

SNORA40.3-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 122 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.3-201ENST00000390964 IGHV3-30-5P0DP03 117 aa-0.54□□□□□ -2.5
SNORA40.3-201ENST00000390964 IDO1P14902 403 aa-0.54□□□□□ -2.5
SNORA40.3-201ENST00000390964 HSPE1P61604 102 aaKnown RBP-0.54□□□□□ -2.5
SNORA40.3-201ENST00000390964 XAF1Q6GPH4 301 aa-0.54□□□□□ -2.5
SNORA40.3-201ENST00000390964 IFT20Q8IY31 132 aa-0.54□□□□□ -2.5
SNORA40.3-201ENST00000390964 CST11Q9H112 138 aa-0.54□□□□□ -2.5
SNORA40.3-201ENST00000390964 PROK2Q9HC23 129 aa-0.54□□□□□ -2.5
SNORA40.3-201ENST00000390964 UBR5O95071 2799 aaPredicted RBP-0.54□□□□□ -2.5
SNORA40.3-201ENST00000390964 N4BP2Q86UW6 1770 aaPredicted RBP-0.55□□□□□ -2.5
SNORA40.3-201ENST00000390964 BANF1O75531 89 aa-0.55□□□□□ -2.5
SNORA40.3-201ENST00000390964 CDKN2CP42773 168 aa-0.55□□□□□ -2.5
SNORA40.3-201ENST00000390964 TMBIM6P55061 237 aa-0.55□□□□□ -2.5
SNORA40.3-201ENST00000390964 C5orf17Q8NAS9 161 aa-0.55□□□□□ -2.5
SNORA40.3-201ENST00000390964 PPP1R14BQ96C90 147 aa-0.55□□□□□ -2.5
SNORA40.3-201ENST00000390964 PLEKHB2Q96CS7 222 aa-0.55□□□□□ -2.5
SNORA40.3-201ENST00000390964 ANK2Q01484 3957 aa-0.55□□□□□ -2.5
SNORA40.3-201ENST00000390964 UNC79Q9P2D8 2635 aa-0.55□□□□□ -2.5
SNORA40.3-201ENST00000390964 CTTNBP2Q8WZ74 1663 aa-0.56□□□□□ -2.5
SNORA40.3-201ENST00000390964 ASXL3Q9C0F0 2248 aa-0.56□□□□□ -2.5
SNORA40.3-201ENST00000390964 PIAS1O75925 651 aa-0.56□□□□□ -2.5
SNORA40.3-201ENST00000390964 CST2P09228 141 aa-0.56□□□□□ -2.5
SNORA40.3-201ENST00000390964 CXCL1P09341 107 aa-0.56□□□□□ -2.5
SNORA40.3-201ENST00000390964 NCALDP61601 193 aa-0.56□□□□□ -2.5
SNORA40.3-201ENST00000390964 ITGB3BPQ13352 177 aaPredicted RBP-0.56□□□□□ -2.5
SNORA40.3-201ENST00000390964 MALSU1Q96EH3 234 aa-0.56□□□□□ -2.5
SNORA40.3-201ENST00000390964 ASB4Q9Y574 426 aa-0.56□□□□□ -2.5
SNORA40.3-201ENST00000390964 PCF11O94913 1555 aaKnown RBP-0.57□□□□□ -2.5
SNORA40.3-201ENST00000390964 K7ERJ3 54 aa-0.57□□□□□ -2.5
SNORA40.3-201ENST00000390964 HIST1H2BKO60814 126 aa-0.57□□□□□ -2.5
SNORA40.3-201ENST00000390964 HIST1H2BJP06899 126 aa-0.57□□□□□ -2.5
SNORA40.3-201ENST00000390964 INSL3P51460 131 aa-0.57□□□□□ -2.5
SNORA40.3-201ENST00000390964 DIAPH2-AS1Q14236 149 aa-0.57□□□□□ -2.5
SNORA40.3-201ENST00000390964 ZCCHC23Q6ZST2 131 aa-0.57□□□□□ -2.5
SNORA40.3-201ENST00000390964 LINC00269Q8N2A0 174 aa-0.57□□□□□ -2.5
SNORA40.3-201ENST00000390964 PARVGQ9HBI0 331 aa-0.57□□□□□ -2.5
SNORA40.3-201ENST00000390964 NAT8BQ9UHF3 227 aa-0.57□□□□□ -2.5
SNORA40.3-201ENST00000390964 PIK3C2AO00443 1686 aa-0.57□□□□□ -2.5
SNORA40.3-201ENST00000390964 AIPO00170 330 aa-0.58□□□□□ -2.5
SNORA40.3-201ENST00000390964 NDUFC2O95298 119 aa-0.58□□□□□ -2.5
SNORA40.3-201ENST00000390964 IFNA14P01570 189 aa-0.58□□□□□ -2.5
SNORA40.3-201ENST00000390964 TRGC2P03986 189 aa-0.58□□□□□ -2.5
SNORA40.3-201ENST00000390964 EVI2AP22794 236 aa-0.58□□□□□ -2.5
SNORA40.3-201ENST00000390964 RPS3P23396 243 aaKnown RBP eCLIP-0.58□□□□□ -2.5
SNORA40.3-201ENST00000390964 SCGB2B2Q4G0G5 96 aa-0.58□□□□□ -2.5
SNORA40.3-201ENST00000390964 GRPEL2Q8TAA5 225 aa-0.58□□□□□ -2.5
SNORA40.3-201ENST00000390964 C9orf16Q9BUW7 83 aa-0.58□□□□□ -2.5
SNORA40.3-201ENST00000390964 OR2J1Q9GZK6 312 aa-0.58□□□□□ -2.5
SNORA40.3-201ENST00000390964 POLQO75417 2590 aa-0.58□□□□□ -2.5
SNORA40.3-201ENST00000390964 ERVS71-1P61550 626 aa-0.59□□□□□ -2.5
SNORA40.3-201ENST00000390964 VMA21Q3ZAQ7 101 aa-0.59□□□□□ -2.5
SNORA40.3-201ENST00000390964 AKIRIN2Q53H80 203 aa-0.59□□□□□ -2.5
SNORA40.3-201ENST00000390964 FAM216BQ8N7L0 139 aa-0.59□□□□□ -2.5
SNORA40.3-201ENST00000390964 GPX7Q96SL4 187 aaPredicted RBP-0.59□□□□□ -2.5
SNORA40.3-201ENST00000390964 UHRF1BP1Q6BDS2 1440 aa-0.59□□□□□ -2.5
SNORA40.3-201ENST00000390964 ADGRL3Q9HAR2 1447 aa-0.59□□□□□ -2.5
SNORA40.3-201ENST00000390964 ATG2AQ2TAZ0 1938 aa-0.6□□□□□ -2.5
SNORA40.3-201ENST00000390964 CAMSAP2Q08AD1 1489 aa-0.6□□□□□ -2.5
SNORA40.3-201ENST00000390964 SERPINA1P01009 418 aa-0.6□□□□□ -2.51
SNORA40.3-201ENST00000390964 VMO1Q7Z5L0 202 aa-0.6□□□□□ -2.51
SNORA40.3-201ENST00000390964 ARMC1Q9NVT9 282 aa-0.6□□□□□ -2.51
SNORA40.3-201ENST00000390964 FLNCQ14315 2725 aa-0.6□□□□□ -2.51
SNORA40.3-201ENST00000390964 MSMO1Q15800 293 aa-0.61□□□□□ -2.51
SNORA40.3-201ENST00000390964 NEDD8Q15843 81 aa-0.61□□□□□ -2.51
SNORA40.3-201ENST00000390964 PHF5AQ7RTV0 110 aaKnown RBP-0.61□□□□□ -2.51
SNORA40.3-201ENST00000390964 LINC00208Q96KT6 92 aa-0.61□□□□□ -2.51
SNORA40.3-201ENST00000390964 EFCAB11Q9BUY7 163 aa-0.61□□□□□ -2.51
SNORA40.3-201ENST00000390964 ARL2BPQ9Y2Y0 163 aa-0.61□□□□□ -2.51
SNORA40.3-201ENST00000390964 CD109Q6YHK3 1445 aa-0.62□□□□□ -2.51
SNORA40.3-201ENST00000390964 CELSR2Q9HCU4 2923 aa-0.62□□□□□ -2.51
SNORA40.3-201ENST00000390964 NSD1Q96L73 2696 aaPredicted RBP-0.62□□□□□ -2.51
SNORA40.3-201ENST00000390964 GYPBP06028 91 aa-0.62□□□□□ -2.51
SNORA40.3-201ENST00000390964 OGNP20774 298 aaKnown RBP-0.62□□□□□ -2.51
SNORA40.3-201ENST00000390964 ZNF56Q15929 161 aa-0.62□□□□□ -2.51
SNORA40.3-201ENST00000390964 DEFB132Q7Z7B7 95 aa-0.62□□□□□ -2.51
SNORA40.3-201ENST00000390964 PYCARDQ9ULZ3 195 aa-0.62□□□□□ -2.51
SNORA40.3-201ENST00000390964 U3KQA8 63 aa-0.62□□□□□ -2.51
SNORA40.3-201ENST00000390964 DSPPQ9NZW4 1301 aa-0.63□□□□□ -2.51
SNORA40.3-201ENST00000390964 KIAA1549LQ6ZVL6 1849 aa-0.63□□□□□ -2.51
SNORA40.3-201ENST00000390964 G3V2T6 193 aa-0.63□□□□□ -2.51
SNORA40.3-201ENST00000390964 ATP5HO75947 161 aa-0.63□□□□□ -2.51
SNORA40.3-201ENST00000390964 CST7O76096 145 aa-0.63□□□□□ -2.51
SNORA40.3-201ENST00000390964 HBBP68871 147 aa-0.63□□□□□ -2.51
SNORA40.3-201ENST00000390964 FKBP1CQ5VVH2 108 aa-0.63□□□□□ -2.51
SNORA40.3-201ENST00000390964 C1orf140Q5VVS0 124 aa-0.63□□□□□ -2.51
SNORA40.3-201ENST00000390964 AP1S3Q96PC3 154 aa-0.63□□□□□ -2.51
SNORA40.3-201ENST00000390964 PRNDQ9UKY0 176 aa-0.63□□□□□ -2.51
SNORA40.3-201ENST00000390964 TPRKBQ9Y3C4 175 aa-0.63□□□□□ -2.51
SNORA40.3-201ENST00000390964 KIAA1107Q9UPP5 1409 aa-0.64□□□□□ -2.51
SNORA40.3-201ENST00000390964 CAMSAP1Q5T5Y3 1602 aa-0.64□□□□□ -2.51
SNORA40.3-201ENST00000390964 RTL9Q8NET4 1388 aa-0.64□□□□□ -2.51
SNORA40.3-201ENST00000390964 RIIAD1A6NNX1 92 aa-0.64□□□□□ -2.51
SNORA40.3-201ENST00000390964 H7C1C5 153 aa-0.64□□□□□ -2.51
SNORA40.3-201ENST00000390964 APOA2P02652 100 aa-0.64□□□□□ -2.51
SNORA40.3-201ENST00000390964 CTXN2P0C2S0 81 aa-0.64□□□□□ -2.51
SNORA40.3-201ENST00000390964 RPL35P42766 123 aaKnown RBP-0.64□□□□□ -2.51
SNORA40.3-201ENST00000390964 LCN6P62502 163 aa-0.64□□□□□ -2.51
SNORA40.3-201ENST00000390964 FXYD3Q14802 87 aa-0.64□□□□□ -2.51
SNORA40.3-201ENST00000390964 OR4C12Q96R67 309 aa-0.64□□□□□ -2.51
SNORA40.3-201ENST00000390964 MRPL35Q9NZE8 188 aaKnown RBP-0.64□□□□□ -2.51
SNORA40.3-201ENST00000390964 WNK2Q9Y3S1 2297 aa-0.64□□□□□ -2.51
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms