RNA–Protein interactions for RNA: ENST00000382438.5

NKX3-2-201, Transcript of NK3 homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NKX3-2, Length 2,801 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-2-201ENST00000382438 ZCCHC24Q8N2G6 241 aaKnown RBP16.59■□□□□ 0.25
NKX3-2-201ENST00000382438 THAP8Q8NA92 274 aa16.59■□□□□ 0.25
NKX3-2-201ENST00000382438 TMEM158Q8WZ71 300 aa16.59■□□□□ 0.25
NKX3-2-201ENST00000382438 HARBI1Q96MB7 349 aa16.59■□□□□ 0.25
NKX3-2-201ENST00000382438 EPOPA6NHQ4 379 aa16.59■□□□□ 0.25
NKX3-2-201ENST00000382438 TWIST1Q15672 202 aa16.59■□□□□ 0.25
NKX3-2-201ENST00000382438 TAL2Q16559 108 aa16.59■□□□□ 0.25
NKX3-2-201ENST00000382438 OTORQ9NRC9 128 aa16.59■□□□□ 0.25
NKX3-2-201ENST00000382438 ZNF688P0C7X2 276 aa16.58■□□□□ 0.25
NKX3-2-201ENST00000382438 NDUFV3P56181 108 aaKnown RBP16.58■□□□□ 0.25
NKX3-2-201ENST00000382438 TEN1Q86WV5 123 aa16.58■□□□□ 0.25
NKX3-2-201ENST00000382438 CGB1A6NKQ9 187 aa16.58■□□□□ 0.24
NKX3-2-201ENST00000382438 FABP5P3A8MUU1 101 aa16.58■□□□□ 0.24
NKX3-2-201ENST00000382438 SCGB2A1O75556 95 aa16.58■□□□□ 0.24
NKX3-2-201ENST00000382438 LYZL6O75951 148 aa16.58■□□□□ 0.24
NKX3-2-201ENST00000382438 GATA1P15976 413 aaPredicted RBP16.57■□□□□ 0.24
NKX3-2-201ENST00000382438 CITED1Q99966 193 aa16.57■□□□□ 0.24
NKX3-2-201ENST00000382438 MSRB1Q9NZV6 116 aa16.57■□□□□ 0.24
NKX3-2-201ENST00000382438 TRAV4A0A0B4J268 109 aa16.56■□□□□ 0.24
NKX3-2-201ENST00000382438 SHISA9B4DS77 424 aa16.56■□□□□ 0.24
NKX3-2-201ENST00000382438 RPEQ96AT9 228 aa16.56■□□□□ 0.24
NKX3-2-201ENST00000382438 MRPS17Q9Y2R5 130 aaKnown RBP16.56■□□□□ 0.24
NKX3-2-201ENST00000382438 CRLF1O75462 422 aa16.56■□□□□ 0.24
NKX3-2-201ENST00000382438 LYZP61626 148 aa16.56■□□□□ 0.24
NKX3-2-201ENST00000382438 GAGE2BQ13066 116 aa16.56■□□□□ 0.24
NKX3-2-201ENST00000382438 GAGE2EQ4V326 116 aa16.56■□□□□ 0.24
NKX3-2-201ENST00000382438 GAGE2DQ9UEU5 116 aa16.56■□□□□ 0.24
NKX3-2-201ENST00000382438 DMDP11532 3685 aa16.55■□□□□ 0.24
NKX3-2-201ENST00000382438 CCL4P13236 92 aa16.55■□□□□ 0.24
NKX3-2-201ENST00000382438 ARL3P36405 182 aa16.55■□□□□ 0.24
NKX3-2-201ENST00000382438 SPRNQ5BIV9 151 aa16.55■□□□□ 0.24
NKX3-2-201ENST00000382438 PPP1R35Q8TAP8 253 aa16.55■□□□□ 0.24
NKX3-2-201ENST00000382438 RPUSD1Q9UJJ7 312 aaKnown RBP16.55■□□□□ 0.24
NKX3-2-201ENST00000382438 M0R3E3 92 aa16.55■□□□□ 0.24
NKX3-2-201ENST00000382438 C3orf56Q8N813 242 aa16.55■□□□□ 0.24
NKX3-2-201ENST00000382438 MAP1LC3AQ9H492 121 aa16.55■□□□□ 0.24
NKX3-2-201ENST00000382438 RHODO00212 210 aa16.54■□□□□ 0.24
NKX3-2-201ENST00000382438 HLA-DRB4P13762 266 aa16.54■□□□□ 0.24
NKX3-2-201ENST00000382438 FBXL15Q9H469 300 aa16.54■□□□□ 0.24
NKX3-2-201ENST00000382438 HLA-DRB4X5D2U9 266 aa16.54■□□□□ 0.24
NKX3-2-201ENST00000382438 CADP27708 2225 aa16.54■□□□□ 0.24
NKX3-2-201ENST00000382438 TTC32Q5I0X7 151 aa16.54■□□□□ 0.24
NKX3-2-201ENST00000382438 C8orf46Q8TAG6 207 aa16.54■□□□□ 0.24
NKX3-2-201ENST00000382438 DSCAMO60469 2012 aa16.53■□□□□ 0.24
NKX3-2-201ENST00000382438 CGB3P0DN86 165 aa16.53■□□□□ 0.24
NKX3-2-201ENST00000382438 CGB7P0DN87 165 aa16.53■□□□□ 0.24
NKX3-2-201ENST00000382438 PSMG4Q5JS54 123 aa16.53■□□□□ 0.24
NKX3-2-201ENST00000382438 FAM159AQ6UWV7 190 aa16.53■□□□□ 0.24
NKX3-2-201ENST00000382438 Q6ZS92 163 aa16.53■□□□□ 0.24
NKX3-2-201ENST00000382438 ANKRD29Q8N6D5 301 aa16.53■□□□□ 0.24
NKX3-2-201ENST00000382438 A0A087WX48 190 aa16.53■□□□□ 0.24
NKX3-2-201ENST00000382438 MRPL20Q9BYC9 149 aaKnown RBP16.53■□□□□ 0.24
NKX3-2-201ENST00000382438 ZGRF1Q86YA3 2104 aa16.53■□□□□ 0.24
NKX3-2-201ENST00000382438 NCBP2LA6PVI3 153 aaKnown RBP16.52■□□□□ 0.24
NKX3-2-201ENST00000382438 ZNF71Q9NQZ8 489 aaPredicted RBP16.52■□□□□ 0.24
NKX3-2-201ENST00000382438 HOXB4P17483 251 aaPredicted RBP16.52■□□□□ 0.23
NKX3-2-201ENST00000382438 SRD5A1P18405 259 aa16.52■□□□□ 0.23
NKX3-2-201ENST00000382438 SUB1P53999 127 aaKnown RBP eCLIP16.52■□□□□ 0.23
NKX3-2-201ENST00000382438 TCL1BO95988 128 aa16.51■□□□□ 0.23
NKX3-2-201ENST00000382438 FOLR3P41439 243 aa16.51■□□□□ 0.23
NKX3-2-201ENST00000382438 HIGD1AQ9Y241 93 aa16.51■□□□□ 0.23
NKX3-2-201ENST00000382438 CTSZQ9UBR2 303 aa16.51■□□□□ 0.23
NKX3-2-201ENST00000382438 SMG1Q96Q15 3661 aaKnown RBP16.5■□□□□ 0.23
NKX3-2-201ENST00000382438 ATP5LO75964 103 aa16.5■□□□□ 0.23
NKX3-2-201ENST00000382438 A8MWV9 139 aa16.5■□□□□ 0.23
NKX3-2-201ENST00000382438 SNCGO76070 127 aa16.5■□□□□ 0.23
NKX3-2-201ENST00000382438 PPDPFQ9H3Y8 114 aa16.5■□□□□ 0.23
NKX3-2-201ENST00000382438 TPSG1Q9NRR2 321 aa16.5■□□□□ 0.23
NKX3-2-201ENST00000382438 PROCRQ9UNN8 238 aa16.5■□□□□ 0.23
NKX3-2-201ENST00000382438 MYMXA0A1B0GTQ4 84 aa16.49■□□□□ 0.23
NKX3-2-201ENST00000382438 TNFRSF6BO95407 300 aa16.49■□□□□ 0.23
NKX3-2-201ENST00000382438 IFITM1P13164 125 aa16.49■□□□□ 0.23
NKX3-2-201ENST00000382438 DEFB108BQ8NET1 73 aa16.49■□□□□ 0.23
NKX3-2-201ENST00000382438 RAX2Q96IS3 184 aa16.49■□□□□ 0.23
NKX3-2-201ENST00000382438 SLC25A39Q9BZJ4 359 aaPredicted RBP16.49■□□□□ 0.23
NKX3-2-201ENST00000382438 SPRY4Q9C004 299 aa16.49■□□□□ 0.23
NKX3-2-201ENST00000382438 A0A1W2PPI3 338 aa16.49■□□□□ 0.23
NKX3-2-201ENST00000382438 SRRM5B3KS81 715 aa16.49■□□□□ 0.23
NKX3-2-201ENST00000382438 SH2D1AO60880 128 aa16.49■□□□□ 0.23
NKX3-2-201ENST00000382438 Q6ZQT7 251 aa16.49■□□□□ 0.23
NKX3-2-201ENST00000382438 TMEM133Q9H2Q1 129 aa16.49■□□□□ 0.23
NKX3-2-201ENST00000382438 TRAV8-2A0A0B4J237 113 aa16.48■□□□□ 0.23
NKX3-2-201ENST00000382438 TMEM75Q8N9X5 138 aa16.48■□□□□ 0.23
NKX3-2-201ENST00000382438 RNF185Q96GF1 192 aa16.48■□□□□ 0.23
NKX3-2-201ENST00000382438 YAE1D1Q9NRH1 226 aa16.47■□□□□ 0.23
NKX3-2-201ENST00000382438 ASPMQ8IZT6 3477 aa16.47■□□□□ 0.23
NKX3-2-201ENST00000382438 TMEM262E9PQX1 116 aa16.47■□□□□ 0.23
NKX3-2-201ENST00000382438 IGHV1-2P23083 117 aa16.47■□□□□ 0.23
NKX3-2-201ENST00000382438 TRGV9Q99603 122 aa16.47■□□□□ 0.23
NKX3-2-201ENST00000382438 EFNA4P52798 201 aa16.46■□□□□ 0.23
NKX3-2-201ENST00000382438 LY6G6EA0A0G2JKS1 128 aa16.46■□□□□ 0.23
NKX3-2-201ENST00000382438 TTTY12Q9BZ98 90 aa16.46■□□□□ 0.23
NKX3-2-201ENST00000382438 U3KQA8 63 aa16.46■□□□□ 0.23
NKX3-2-201ENST00000382438 LGALS1P09382 135 aaKnown RBP16.46■□□□□ 0.22
NKX3-2-201ENST00000382438 CACNA1EQ15878 2313 aa16.45■□□□□ 0.22
NKX3-2-201ENST00000382438 EGR2P11161 476 aaPredicted RBP16.45■□□□□ 0.22
NKX3-2-201ENST00000382438 SRSF9Q13242 221 aaKnown RBP eCLIP16.45■□□□□ 0.22
NKX3-2-201ENST00000382438 MEIG1Q5JSS6 88 aa16.45■□□□□ 0.22
NKX3-2-201ENST00000382438 MYOZ3Q8TDC0 251 aa16.45■□□□□ 0.22
NKX3-2-201ENST00000382438 VCX2Q9H322 139 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms