RNA–Protein interactions for RNA: ENST00000380877.7

GABPB1-203, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABPB1, Length 4,816 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-203ENST00000380877 C1orf194Q5T5A4 169 aa9.71□□□□□ -0.86
GABPB1-203ENST00000380877 RNF182Q8N6D2 247 aa9.71□□□□□ -0.86
GABPB1-203ENST00000380877 ZNF491Q8N8L2 437 aa9.71□□□□□ -0.86
GABPB1-203ENST00000380877 LYPD6BQ8NI32 183 aa9.71□□□□□ -0.86
GABPB1-203ENST00000380877 SMIM12Q96EX1 92 aa9.71□□□□□ -0.86
GABPB1-203ENST00000380877 DSCAMO60469 2012 aa9.7□□□□□ -0.86
GABPB1-203ENST00000380877 PFN1P07737 140 aaKnown RBP9.7□□□□□ -0.86
GABPB1-203ENST00000380877 CGB3P0DN86 165 aa9.7□□□□□ -0.86
GABPB1-203ENST00000380877 CGB7P0DN87 165 aa9.7□□□□□ -0.86
GABPB1-203ENST00000380877 RNF151Q2KHN1 245 aa9.7□□□□□ -0.86
GABPB1-203ENST00000380877 DEFB112Q30KQ8 113 aa9.7□□□□□ -0.86
GABPB1-203ENST00000380877 LYRM7Q5U5X0 104 aa9.7□□□□□ -0.86
GABPB1-203ENST00000380877 NIT1Q86X76 327 aa9.7□□□□□ -0.86
GABPB1-203ENST00000380877 FOXC2Q99958 501 aa9.7□□□□□ -0.86
GABPB1-203ENST00000380877 USP9YO00507 2555 aaPredicted RBP9.7□□□□□ -0.86
GABPB1-203ENST00000380877 ZFP36P26651 326 aaKnown RBP9.7□□□□□ -0.86
GABPB1-203ENST00000380877 ACTL10Q5JWF8 245 aa9.7□□□□□ -0.86
GABPB1-203ENST00000380877 TMEM14CQ9P0S9 112 aa9.7□□□□□ -0.86
GABPB1-203ENST00000380877 TRAV12-3A0A0B4J271 114 aa9.7□□□□□ -0.86
GABPB1-203ENST00000380877 EVI2AP22794 236 aa9.7□□□□□ -0.86
GABPB1-203ENST00000380877 GEMIN7Q9H840 131 aaKnown RBP9.7□□□□□ -0.86
GABPB1-203ENST00000380877 OR11H12B2RN74 326 aa9.7□□□□□ -0.86
GABPB1-203ENST00000380877 IGHV4-59P01825 116 aa9.7□□□□□ -0.86
GABPB1-203ENST00000380877 PSMB2P49721 201 aa9.7□□□□□ -0.86
GABPB1-203ENST00000380877 C10orf91Q5T1B1 145 aa9.7□□□□□ -0.86
GABPB1-203ENST00000380877 Q8N7P7 452 aa9.7□□□□□ -0.86
GABPB1-203ENST00000380877 OR11H1Q8NG94 326 aa9.7□□□□□ -0.86
GABPB1-203ENST00000380877 OR11H2Q8NH07 326 aa9.7□□□□□ -0.86
GABPB1-203ENST00000380877 FXYD5Q96DB9 178 aa9.7□□□□□ -0.86
GABPB1-203ENST00000380877 ST20Q9HBF5 79 aa9.7□□□□□ -0.86
GABPB1-203ENST00000380877 CHD7Q9P2D1 2997 aa9.7□□□□□ -0.86
GABPB1-203ENST00000380877 PROP1O75360 226 aa9.69□□□□□ -0.86
GABPB1-203ENST00000380877 SNCGO76070 127 aa9.69□□□□□ -0.86
GABPB1-203ENST00000380877 NCR2O95944 276 aa9.69□□□□□ -0.86
GABPB1-203ENST00000380877 HBDP02042 147 aa9.69□□□□□ -0.86
GABPB1-203ENST00000380877 AMBPP02760 352 aa9.69□□□□□ -0.86
GABPB1-203ENST00000380877 IGHV4-38-2P0DP08 117 aa9.69□□□□□ -0.86
GABPB1-203ENST00000380877 DEFB113Q30KQ7 82 aa9.69□□□□□ -0.86
GABPB1-203ENST00000380877 USP9XQ93008 2570 aaPredicted RBP9.69□□□□□ -0.86
GABPB1-203ENST00000380877 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.69□□□□□ -0.86
GABPB1-203ENST00000380877 NDUFA4O00483 81 aa9.69□□□□□ -0.86
GABPB1-203ENST00000380877 C14orf144Q96I85 54 aa9.69□□□□□ -0.86
GABPB1-203ENST00000380877 SPOCK3Q9BQ16 436 aa9.69□□□□□ -0.86
GABPB1-203ENST00000380877 IGHV7-81A0A0B4J1V7 117 aa9.69□□□□□ -0.86
GABPB1-203ENST00000380877 LBHQ53QV2 105 aaPredicted RBP9.69□□□□□ -0.86
GABPB1-203ENST00000380877 ZNF114Q8NC26 417 aa9.69□□□□□ -0.86
GABPB1-203ENST00000380877 C11orf52Q96A22 123 aa9.69□□□□□ -0.86
GABPB1-203ENST00000380877 IGKV3OR2-268A0A0C4DH90 116 aa9.68□□□□□ -0.86
GABPB1-203ENST00000380877 D6R8Y8 96 aa9.68□□□□□ -0.86
GABPB1-203ENST00000380877 TMEM170BQ5T4T1 132 aa9.68□□□□□ -0.86
GABPB1-203ENST00000380877 TMEM256Q8N2U0 113 aa9.68□□□□□ -0.86
GABPB1-203ENST00000380877 TMEM75Q8N9X5 138 aa9.68□□□□□ -0.86
GABPB1-203ENST00000380877 GCSHP23434 173 aa9.68□□□□□ -0.86
GABPB1-203ENST00000380877 TMEM249Q2WGJ8 235 aa9.68□□□□□ -0.86
GABPB1-203ENST00000380877 IL17RELQ6ZVW7 336 aa9.68□□□□□ -0.86
GABPB1-203ENST00000380877 NPBQ8NG41 125 aa9.68□□□□□ -0.86
GABPB1-203ENST00000380877 PMCHL2Q9BQD1 86 aa9.68□□□□□ -0.86
GABPB1-203ENST00000380877 TRAV8-6A0A0B4J262 113 aa9.68□□□□□ -0.86
GABPB1-203ENST00000380877 PLXNB1O43157 2135 aa9.68□□□□□ -0.86
GABPB1-203ENST00000380877 HOXA3O43365 443 aaPredicted RBP9.68□□□□□ -0.86
GABPB1-203ENST00000380877 LGALS3P17931 250 aaKnown RBP9.68□□□□□ -0.86
GABPB1-203ENST00000380877 GSN-AS1Q9NRJ2 163 aa9.68□□□□□ -0.86
GABPB1-203ENST00000380877 PLA2G2EQ9NZK7 142 aa9.68□□□□□ -0.86
GABPB1-203ENST00000380877 ZFYVE26Q68DK2 2539 aa9.68□□□□□ -0.86
GABPB1-203ENST00000380877 CMC4P56277 68 aaPredicted RBP9.67□□□□□ -0.86
GABPB1-203ENST00000380877 JOSD1Q15040 202 aaPredicted RBP9.67□□□□□ -0.86
GABPB1-203ENST00000380877 C8orf86Q6ZUL3 223 aa9.67□□□□□ -0.86
GABPB1-203ENST00000380877 CHCHD1Q96BP2 118 aaKnown RBP9.67□□□□□ -0.86
GABPB1-203ENST00000380877 ZNF492Q9P255 531 aa9.67□□□□□ -0.86
GABPB1-203ENST00000380877 PRSS2P07478 247 aa9.67□□□□□ -0.86
GABPB1-203ENST00000380877 DEFB131AP59861 70 aa9.67□□□□□ -0.86
GABPB1-203ENST00000380877 GTSCR1Q86UQ5 136 aa9.67□□□□□ -0.86
GABPB1-203ENST00000380877 VPS25Q9BRG1 176 aa9.67□□□□□ -0.86
GABPB1-203ENST00000380877 MIEN1Q9BRT3 115 aa9.67□□□□□ -0.86
GABPB1-203ENST00000380877 C19orf84I3L1E1 186 aa9.67□□□□□ -0.86
GABPB1-203ENST00000380877 SRSF1Q07955 248 aaKnown RBP eCLIP9.67□□□□□ -0.86
GABPB1-203ENST00000380877 GTF2H5Q6ZYL4 71 aa9.67□□□□□ -0.86
GABPB1-203ENST00000380877 HIST1H4GQ99525 98 aa9.67□□□□□ -0.86
GABPB1-203ENST00000380877 K7EIM0 57 aa9.66□□□□□ -0.86
GABPB1-203ENST00000380877 IGKV1-17P01599 117 aa9.66□□□□□ -0.86
GABPB1-203ENST00000380877 VPREB3Q9UKI3 123 aa9.66□□□□□ -0.86
GABPB1-203ENST00000380877 RANBP2P49792 3224 aaKnown RBP9.66□□□□□ -0.86
GABPB1-203ENST00000380877 ARMS2P0C7Q2 107 aa9.66□□□□□ -0.86
GABPB1-203ENST00000380877 FXYD7P58549 80 aa9.66□□□□□ -0.86
GABPB1-203ENST00000380877 UTF1Q5T230 341 aa9.66□□□□□ -0.86
GABPB1-203ENST00000380877 ST6GALNAC6Q969X2 333 aa9.66□□□□□ -0.86
GABPB1-203ENST00000380877 LINC00574Q9H8X3 128 aa9.66□□□□□ -0.86
GABPB1-203ENST00000380877 TMEM238LA0A1B0GVL6 79 aa9.66□□□□□ -0.86
GABPB1-203ENST00000380877 A6NJY4 79 aa9.66□□□□□ -0.86
GABPB1-203ENST00000380877 Q8N9W7 124 aa9.66□□□□□ -0.86
GABPB1-203ENST00000380877 IGLV2-23P01705 113 aa9.66□□□□□ -0.86
GABPB1-203ENST00000380877 ELANEP08246 267 aa9.66□□□□□ -0.86
GABPB1-203ENST00000380877 PLA2G5P39877 138 aa9.66□□□□□ -0.86
GABPB1-203ENST00000380877 CTAG1AP78358 180 aa9.66□□□□□ -0.86
GABPB1-203ENST00000380877 I3L2K1 104 aa9.65□□□□□ -0.86
GABPB1-203ENST00000380877 GFRA4Q9GZZ7 299 aa9.65□□□□□ -0.86
GABPB1-203ENST00000380877 BLCAPP62952 87 aa9.65□□□□□ -0.86
GABPB1-203ENST00000380877 ORMDL2Q53FV1 153 aa9.65□□□□□ -0.86
GABPB1-203ENST00000380877 DNLZQ5SXM8 178 aa9.65□□□□□ -0.86
GABPB1-203ENST00000380877 PRR25Q96S07 402 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms