RNA–Protein interactions for RNA: ENST00000378815.10

RAB3IP-204, Transcript of RAB3A interacting protein, humanhuman

TSL 2 BASIC

Gene RAB3IP, Length 2,386 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-204ENST00000378815 CHEK1O14757 476 aa11.78□□□□□ -0.52
RAB3IP-204ENST00000378815 HLA-DMBP28068 263 aa11.78□□□□□ -0.52
RAB3IP-204ENST00000378815 TCL1AP56279 114 aa11.78□□□□□ -0.52
RAB3IP-204ENST00000378815 NDUFA6P56556 154 aa11.78□□□□□ -0.52
RAB3IP-204ENST00000378815 SLC35B1P78383 322 aa11.78□□□□□ -0.52
RAB3IP-204ENST00000378815 FOXE3Q13461 319 aa11.78□□□□□ -0.52
RAB3IP-204ENST00000378815 DUX5Q96PT3 197 aa11.78□□□□□ -0.52
RAB3IP-204ENST00000378815 ELANEP08246 267 aa11.77□□□□□ -0.52
RAB3IP-204ENST00000378815 MYOZ3Q8TDC0 251 aa11.77□□□□□ -0.52
RAB3IP-204ENST00000378815 IGKV2-40A0A087WW87 121 aaPredicted RBP11.77□□□□□ -0.53
RAB3IP-204ENST00000378815 IGKV2D-40P01614 121 aaPredicted RBP11.77□□□□□ -0.53
RAB3IP-204ENST00000378815 RPLP1P05386 114 aaKnown RBP11.77□□□□□ -0.53
RAB3IP-204ENST00000378815 CT83Q5H943 113 aa11.77□□□□□ -0.53
RAB3IP-204ENST00000378815 LCN12Q6JVE5 192 aa11.77□□□□□ -0.53
RAB3IP-204ENST00000378815 TSKUQ8WUA8 353 aa11.77□□□□□ -0.53
RAB3IP-204ENST00000378815 ZC2HC1AQ96GY0 325 aa11.77□□□□□ -0.53
RAB3IP-204ENST00000378815 RPP21Q9H633 154 aaKnown RBP11.77□□□□□ -0.53
RAB3IP-204ENST00000378815 TRAPPC1Q9Y5R8 145 aa11.77□□□□□ -0.53
RAB3IP-204ENST00000378815 FBLL1A6NHQ2 334 aaKnown RBP11.76□□□□□ -0.53
RAB3IP-204ENST00000378815 NPIPB6E9PJ23 425 aa11.76□□□□□ -0.53
RAB3IP-204ENST00000378815 P01737 135 aa11.76□□□□□ -0.53
RAB3IP-204ENST00000378815 RNF152Q8N8N0 203 aa11.76□□□□□ -0.53
RAB3IP-204ENST00000378815 IZUMO1RA6ND01 250 aa11.76□□□□□ -0.53
RAB3IP-204ENST00000378815 ZNF705FA8MVS1 300 aaPredicted RBP11.76□□□□□ -0.53
RAB3IP-204ENST00000378815 FRMD6-AS1P0C7T7 363 aa11.76□□□□□ -0.53
RAB3IP-204ENST00000378815 HOXA5P20719 270 aa11.76□□□□□ -0.53
RAB3IP-204ENST00000378815 C8orf86Q6ZUL3 223 aa11.76□□□□□ -0.53
RAB3IP-204ENST00000378815 GBGT1Q8N5D6 347 aa11.76□□□□□ -0.53
RAB3IP-204ENST00000378815 DAZAP1Q96EP5 407 aaKnown RBP11.76□□□□□ -0.53
RAB3IP-204ENST00000378815 ASCL2Q99929 193 aa11.76□□□□□ -0.53
RAB3IP-204ENST00000378815 ITPR2Q14571 2701 aa11.76□□□□□ -0.53
RAB3IP-204ENST00000378815 TRAV8-2A0A0B4J237 113 aa11.75□□□□□ -0.53
RAB3IP-204ENST00000378815 CBLN1P23435 193 aa11.75□□□□□ -0.53
RAB3IP-204ENST00000378815 SMUG1Q53HV7 270 aa11.75□□□□□ -0.53
RAB3IP-204ENST00000378815 GPHB5Q86YW7 130 aa11.75□□□□□ -0.53
RAB3IP-204ENST00000378815 DAZ1Q9NQZ3 744 aaKnown RBP11.75□□□□□ -0.53
RAB3IP-204ENST00000378815 GCN1Q92616 2671 aaKnown RBP11.75□□□□□ -0.53
RAB3IP-204ENST00000378815 FLNAP21333 2647 aaKnown RBP11.75□□□□□ -0.53
RAB3IP-204ENST00000378815 RPL19P84098 196 aaKnown RBP11.75□□□□□ -0.53
RAB3IP-204ENST00000378815 COX8CQ7Z4L0 72 aa11.75□□□□□ -0.53
RAB3IP-204ENST00000378815 RNF182Q8N6D2 247 aa11.75□□□□□ -0.53
RAB3IP-204ENST00000378815 NAT8BQ9UHF3 227 aa11.75□□□□□ -0.53
RAB3IP-204ENST00000378815 AKAP9Q99996 3911 aa11.74□□□□□ -0.53
RAB3IP-204ENST00000378815 A0A1W2PS18 150 aa11.74□□□□□ -0.53
RAB3IP-204ENST00000378815 NUP35Q8NFH5 326 aa11.74□□□□□ -0.53
RAB3IP-204ENST00000378815 MRPL53Q96EL3 112 aaKnown RBP11.74□□□□□ -0.53
RAB3IP-204ENST00000378815 NEU1Q99519 415 aa11.74□□□□□ -0.53
RAB3IP-204ENST00000378815 VGLL1Q99990 258 aa11.74□□□□□ -0.53
RAB3IP-204ENST00000378815 GNB1LQ9BYB4 327 aa11.74□□□□□ -0.53
RAB3IP-204ENST00000378815 IGHV7-4-1A0A0J9YVY3 117 aa11.74□□□□□ -0.53
RAB3IP-204ENST00000378815 K7EMT4 169 aa11.74□□□□□ -0.53
RAB3IP-204ENST00000378815 SPINK4O60575 86 aa11.74□□□□□ -0.53
RAB3IP-204ENST00000378815 CRIP1P50238 77 aa11.74□□□□□ -0.53
RAB3IP-204ENST00000378815 AKR1D1P51857 326 aa11.74□□□□□ -0.53
RAB3IP-204ENST00000378815 FAM106AQ4KMX7 169 aa11.74□□□□□ -0.53
RAB3IP-204ENST00000378815 TM4SF20Q53R12 229 aa11.74□□□□□ -0.53
RAB3IP-204ENST00000378815 OR4B1Q8NGF8 309 aa11.74□□□□□ -0.53
RAB3IP-204ENST00000378815 C8orf49Q96NF6 230 aa11.74□□□□□ -0.53
RAB3IP-204ENST00000378815 YAE1D1Q9NRH1 226 aa11.74□□□□□ -0.53
RAB3IP-204ENST00000378815 RBAKDNA6NC62 111 aa11.73□□□□□ -0.53
RAB3IP-204ENST00000378815 HIGD1CA8MV81 97 aa11.73□□□□□ -0.53
RAB3IP-204ENST00000378815 A8MWL6 223 aa11.73□□□□□ -0.53
RAB3IP-204ENST00000378815 PRAC2D3DTV9 90 aa11.73□□□□□ -0.53
RAB3IP-204ENST00000378815 SAPCD1Q5SSQ6 148 aa11.73□□□□□ -0.53
RAB3IP-204ENST00000378815 UBE2E2Q96LR5 201 aa11.73□□□□□ -0.53
RAB3IP-204ENST00000378815 TLN2Q9Y4G6 2542 aa11.73□□□□□ -0.53
RAB3IP-204ENST00000378815 DNAJC9-AS1A6NH13 148 aa11.72□□□□□ -0.53
RAB3IP-204ENST00000378815 LGALS1P09382 135 aaKnown RBP11.72□□□□□ -0.53
RAB3IP-204ENST00000378815 CDX1P47902 265 aaPredicted RBP11.72□□□□□ -0.53
RAB3IP-204ENST00000378815 COX19Q49B96 90 aa11.72□□□□□ -0.53
RAB3IP-204ENST00000378815 PRR25Q96S07 402 aa11.72□□□□□ -0.53
RAB3IP-204ENST00000378815 GFRA4Q9GZZ7 299 aa11.72□□□□□ -0.53
RAB3IP-204ENST00000378815 MRPL54Q6P161 138 aaKnown RBP11.72□□□□□ -0.53
RAB3IP-204ENST00000378815 GTSF1Q8WW33 167 aa11.72□□□□□ -0.53
RAB3IP-204ENST00000378815 RHPN1-AS1Q9BWJ2 59 aa11.72□□□□□ -0.53
RAB3IP-204ENST00000378815 CLEC5AQ9NY25 188 aa11.72□□□□□ -0.53
RAB3IP-204ENST00000378815 FAM231BA6NCW3 169 aa11.71□□□□□ -0.53
RAB3IP-204ENST00000378815 SNURFLB1AK76 121 aa11.71□□□□□ -0.53
RAB3IP-204ENST00000378815 COA6Q5JTJ3 125 aaKnown RBP11.71□□□□□ -0.53
RAB3IP-204ENST00000378815 WDR73Q6P4I2 378 aa11.71□□□□□ -0.53
RAB3IP-204ENST00000378815 RASL11AQ6T310 242 aa11.71□□□□□ -0.53
RAB3IP-204ENST00000378815 TMEM136Q6ZRR5 245 aa11.71□□□□□ -0.53
RAB3IP-204ENST00000378815 Q8TAT8 98 aa11.71□□□□□ -0.53
RAB3IP-204ENST00000378815 MRPL18Q9H0U6 180 aaKnown RBP11.71□□□□□ -0.53
RAB3IP-204ENST00000378815 SMPXQ9UHP9 88 aa11.71□□□□□ -0.53
RAB3IP-204ENST00000378815 IFITM10A6NMD0 228 aa11.71□□□□□ -0.54
RAB3IP-204ENST00000378815 MT-ND6P03923 174 aa11.71□□□□□ -0.54
RAB3IP-204ENST00000378815 CT45A10P0DMU9 189 aa11.71□□□□□ -0.54
RAB3IP-204ENST00000378815 GFI1BQ5VTD9 330 aa11.71□□□□□ -0.54
RAB3IP-204ENST00000378815 OR2D3Q8NGH3 330 aa11.71□□□□□ -0.54
RAB3IP-204ENST00000378815 WIPF2Q8TF74 440 aaPredicted RBP11.71□□□□□ -0.54
RAB3IP-204ENST00000378815 C16orf92Q96LL3 132 aa11.71□□□□□ -0.54
RAB3IP-204ENST00000378815 FAM181BA6NEQ2 426 aa11.7□□□□□ -0.54
RAB3IP-204ENST00000378815 SOCS3O14543 225 aa11.7□□□□□ -0.54
RAB3IP-204ENST00000378815 TCF24Q7RTU0 167 aa11.7□□□□□ -0.54
RAB3IP-204ENST00000378815 UFC1Q9Y3C8 167 aa11.7□□□□□ -0.54
RAB3IP-204ENST00000378815 XKRY2A2RUG3 117 aa11.7□□□□□ -0.54
RAB3IP-204ENST00000378815 ERCC8Q13216 396 aa11.7□□□□□ -0.54
RAB3IP-204ENST00000378815 HIST3H2BBQ8N257 126 aa11.7□□□□□ -0.54
RAB3IP-204ENST00000378815 ESM1Q9NQ30 184 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms